downloading reverse dependencies ‘AHM’, ‘DNAmf’, ‘dynemu’, ‘maximin’, ‘RNAmf’, ‘dynaTree’, ‘reglogit’ trying URL 'file:///data/Repositories/CRAN/src/contrib/AHM_1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/DNAmf_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/dynemu_1.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/maximin_1.0-6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RNAmf_1.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/dynaTree_1.2-17.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/reglogit_1.2-8.tar.gz' installing dependencies ‘mixexp’, ‘plgp’, ‘RNAmf’ also installing the dependency ‘daewr’ begin installing package ‘daewr’ begin installing package ‘plgp’ * installing *source* package ‘plgp’ ... ** this is package ‘plgp’ version ‘1.1-13’ ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUgwGN3/R.INSTALL161acb33d38885/plgp/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c covar.c -o covar.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c entropy.c -o entropy.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ieci.c -o ieci.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linalg.c -o linalg.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matrix.c -o matrix.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c plgp_init.c -o plgp_init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rhelp.c -o rhelp.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o plgp.so covar.o entropy.o ieci.o linalg.o matrix.o plgp_init.o rhelp.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUgwGN3/R.INSTALL161acb33d38885/plgp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-plgp/00new/plgp/libs ** R ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plgp) begin installing package ‘RNAmf’ * installing *source* package ‘daewr’ ... ** this is package ‘daewr’ version ‘1.2-11’ ** package ‘daewr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (daewr) begin installing package ‘mixexp’ * installing *source* package ‘RNAmf’ ... ** this is package ‘RNAmf’ version ‘1.1.2’ ** package ‘RNAmf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RNAmf) * installing *source* package ‘mixexp’ ... ** this is package ‘mixexp’ version ‘1.2.7.1’ ** package ‘mixexp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyMSbuU/R.INSTALL161b6e35e1b0a3/mixexp/src' gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c cnvrt.f -o cnvrt.o f951: Warning: Nonconforming tab character in column 1 of line 74 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 76 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 77 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 78 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 82 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 94 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 102 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 108 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 115 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 116 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 117 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 131 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 210 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 264 [-Wtabs] f951: Warning: Nonconforming tab character in column 2 of line 272 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 273 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 274 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 308 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 356 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 357 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 358 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 365 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 366 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 367 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 374 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 375 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 376 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 379 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 695 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 696 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 703 [-Wtabs] cnvrt.f:104:19: 104 | 69 CONTINUE | 1 Warning: Nonconforming tab character at (1) [-Wtabs] cnvrt.f:338:28: 338 | DO 587 KK=1, NVRR | 1 Warning: Nonconforming tab character at (1) [-Wtabs] cnvrt.f:340:16: 340 | 587 CONTINUE | 1 Warning: Nonconforming tab character at (1) [-Wtabs] cnvrt.f:702:16: 702 | 98 continue | 1 Warning: Nonconforming tab character at (1) [-Wtabs] cnvrt.f:364:4: 364 | 602 DO 3001 II=1,NVAR | 1 Warning: Label 602 at (1) defined but not used [-Wunused-label] cnvrt.f:392:4: 392 | 555 RETURN | 1 Warning: Label 555 at (1) defined but not used [-Wunused-label] cnvrt.f:268:4: 268 | 530 FORMAT(' ',10E12.4) | 1 Warning: Label 530 at (1) defined but not used [-Wunused-label] cnvrt.f:266:4: 266 | 520 FORMAT(' ',I4,2X,10E12.4,:/' ',6X,10E12.4) | 1 Warning: Label 520 at (1) defined but not used [-Wunused-label] cnvrt.f:276:4: 276 | 290 NCM=NVAR-IDIM-IMIX | 1 Warning: Label 290 at (1) defined but not used [-Wunused-label] cnvrt.f:100:4: 100 | 65 DO 70 I=1,NCON | 1 Warning: Label 65 at (1) defined but not used [-Wunused-label] cnvrt.f:487:4: 487 | 35 FORMAT('0 CONSTRAINT IMPLIES ANOTHER,', | 1 Warning: Label 35 at (1) defined but not used [-Wunused-label] cnvrt.f:465:4: 465 | 20 FORMAT('0 INCONSISTENT CONSTRAINT'/ | 1 Warning: Label 20 at (1) defined but not used [-Wunused-label] cnvrt.f:457:4: 457 | 16 FORMAT('0 UNNECESSARY CONSTRAINT'/ | 1 Warning: Label 16 at (1) defined but not used [-Wunused-label] cnvrt.f:639:4: 639 | 50 FORMAT(' ',I4,10E12.4,:/' ', | 1 Warning: Label 50 at (1) defined but not used [-Wunused-label] cnvrt.f:634:4: 634 | 40 FORMAT('0'/' FINAL DK MATRIX (# VERTICES BY', | 1 Warning: Label 40 at (1) defined but not used [-Wunused-label] cnvrt.f:631:4: 631 | 20 FORMAT(' ',I4,2X,10E12.4,:/' ',6X,10E12.4) | 1 Warning: Label 20 at (1) defined but not used [-Wunused-label] cnvrt.f:627:4: 627 | 10 FORMAT('0'/' FINAL CONSTRAINT MATRIX--EACH ROW', | 1 Warning: Label 10 at (1) defined but not used [-Wunused-label] cnvrt.f:73:21: 73 | CHARACTER(20) FIN | 1~~ Warning: Unused variable ‘fin’ declared at (1) [-Wunused-variable] gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o mixexp.so cnvrt.o init.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyMSbuU/R.INSTALL161b6e35e1b0a3/mixexp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mixexp/00new/mixexp/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mixexp) checking plgp_1.1-13.tar.gz ... checking AHM_1.0.1.tar.gz ... checking DNAmf_0.1.0.tar.gz ... checking dynemu_1.0.2.tar.gz ... checking maximin_1.0-6.tar.gz ... checking RNAmf_1.1.2.tar.gz ... checking dynaTree_1.2-17.tar.gz ... checking reglogit_1.2-8.tar.gz ... Depends: Package: plgp Depends: R (>= 2.4), mvtnorm, tgp Timings: user system elapsed plgp 23.022 3.362 27.594 Results: Check status summary: OK Source packages 1 Reverse depends 7 Check results summary: plgp ... OK rdepends_AHM ... OK rdepends_DNAmf ... OK rdepends_dynaTree ... OK rdepends_dynemu ... OK rdepends_maximin ... OK rdepends_reglogit ... OK rdepends_RNAmf ... OK