* using log directory 'd:/RCompile/CRANincoming/R-devel/planningML.Rcheck' * using R Under development (unstable) (2025-10-03 r88899 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'planningML/DESCRIPTION' ... OK * this is package 'planningML' version '1.0.2' * package encoding: UTF-8 * checking CRAN incoming feasibility ... OK * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'planningML' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [15s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [197s] NOTE Examples with CPU (user + system) or elapsed time > 10s user system elapsed featureselection 182.62 11.06 193.68 * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... ERROR Error(s) in re-building vignettes: --- re-building 'User_manual_for_planningML.Rmd' using rmarkdown Quitting from User_manual_for_planningML.Rmd:161-165 [unnamed-chunk-15] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `auc()`: ! length(x) == length(unique(x)) is not TRUE --- Backtrace: ▆ 1. └─planningML::samplesize(...) 2. └─base::replicate(...) 3. └─base::sapply(...) 4. └─base::lapply(X = X, FUN = FUN, ...) 5. └─planningML (local) FUN(X[[i]], ...) 6. └─planningML (local) HCT.simulation(...) 7. └─MESS::auc(x = unique_roc_data$x, y = unique_roc_data$y, type = "spline") 8. └─base::stopifnot(length(x) == length(unique(x))) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'User_manual_for_planningML.Rmd' failed with diagnostics: length(x) == length(unique(x)) is not TRUE --- failed re-building 'User_manual_for_planningML.Rmd' SUMMARY: processing the following file failed: 'User_manual_for_planningML.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE