* using log directory 'd:/RCompile/CRANincoming/R-devel/pizzarr.Rcheck'
* using R Under development (unstable) (2026-03-15 r89634 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* current time: 2026-03-16 17:50:37 UTC
* checking for file 'pizzarr/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'pizzarr' version '0.1.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'David Blodgett <dblodgett@usgs.gov>'

New submission

Possibly misspelled words in DESCRIPTION:
  Zarr (3:19)

Found the following (possibly) invalid file URI:
  URI: CONTRIBUTING.md
    From: README.md
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'pizzarr' can be installed ... WARNING
Found the following significant warnings:
  Warning: bad markup (extra space?) at ZarrArray.Rd:78:2
  Warning: D:/temp/2026_03_16_18_50_17_32074/RtmpAHFhrR/R.INSTALL14dccf3c342d/pizzarr/man/ZarrArray.Rd:1094: unexpected END_OF_INPUT '
See 'd:/RCompile/CRANincoming/R-devel/pizzarr.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... WARNING
ZarrArray.Rd:73-78: First argument to \href must be verbatim URL
problem found in 'ZarrArray.Rd'
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [61s] OK
  Running 'testthat.R' [60s]
* checking PDF version of manual ... [11s] WARNING
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
! Extra }, or forgotten $.
<argument> \\code{ZarrArray$[()}
                                
l.6886 ...d-ZarrArray-\%5B}{\\code{ZarrArray$[()}}
                                                  \\item \\href{\#method-Zar...
! Missing $ inserted.
<inserted text> 
                $
l.6886 ...d-ZarrArray-\%5B}{\\code{ZarrArray$[()}}
                                                  \\item \\href{\#method-Zar...
! Missing } inserted.
<inserted text> 
                }
l.6886 ...d-ZarrArray-\%5B}{\\code{ZarrArray$[()}}
                                                  \\item \\href{\#method-Zar...
! Extra }, or forgotten $.
l.6886 ...Array-\%5B\%3C-}{\\code{ZarrArray$[<-()}
                                                  }\\item \\href{\#method-Za...
I've deleted a group-closing symbol because it seems to be
spurious, as in `$x}$'. But perhaps the } is legitimate and
! Extra }, or forgotten $.
l.6886 ...rray-\%5B\%3C-}{\\code{ZarrArray$[<-()}}
                                                  \\item \\href{\#method-Zar...
I've deleted a group-closing symbol because it seems to be
spurious, as in `$x}$'. But perhaps the } is legitimate and
! Missing } inserted.
<inserted text> 
                }
l.6886 ...od-ZarrArray-as.array}{\\code{ZarrArray$
                                                  as.array()}}\\item \\href{...
! Missing } inserted.
<inserted text> 
                }
l.6886 ...od-ZarrArray-as.array}{\\code{ZarrArray$
                                                  as.array()}}\\item \\href{...
! Extra }, or forgotten $.
l.6886 ...rrArray-clone}{\\code{ZarrArray$clone()}
                                                  }}}{}
I've deleted a group-closing symbol because it seems to be
spurious, as in `$x}$'. But perhaps the } is legitimate and
! Extra }, or forgotten $.
l.6886 ...rArray-clone}{\\code{ZarrArray$clone()}}
                                                  }}{}
I've deleted a group-closing symbol because it seems to be
spurious, as in `$x}$'. But perhaps the } is legitimate and
! Extra }, or forgotten $.
l.6886 ...Array-clone}{\\code{ZarrArray$clone()}}}
                                                  }{}
I've deleted a group-closing symbol because it seems to be
spurious, as in `$x}$'. But perhaps the } is legitimate and
! Extra }, or forgotten $.
l.6886 ...rray-clone}{\\code{ZarrArray$clone()}}}}
                                                  {}
I've deleted a group-closing symbol because it seems to be
spurious, as in `$x}$'. But perhaps the } is legitimate and
! Missing $ inserted.
<inserted text> 
                $
l.6887 
       
! Missing } inserted.
<inserted text> 
                }
l.6887 
       
! Missing } inserted.
<inserted text> 
                }
l.8428 \end{itemize}
                    
* checking PDF version of manual without index ... ERROR
* checking HTML version of manual ... [21s] NOTE
Found the following HTML validation problems:
ZarrArray.html:208:1 (ZarrArray.Rd:81): Warning: inserting implicit <p>
ZarrArray.html:206:9 (ZarrArray.Rd:79): Warning: <a> converting backslash in URI to slash
ZarrArray.html:206:9 (ZarrArray.Rd:79): Warning: <a> escaping malformed URI reference
ZarrArray.html:206:9 (ZarrArray.Rd:79): Warning: <a> illegal characters found in URI
ZarrArray.html:208:1 (ZarrArray.Rd:81): Warning: trimming empty <p>
pizzarr.html:7268:1 (ZarrArray.Rd:81): Warning: inserting implicit <p>
pizzarr.html:7266:9 (ZarrArray.Rd:79): Warning: <a> converting backslash in URI to slash
pizzarr.html:7266:9 (ZarrArray.Rd:79): Warning: <a> escaping malformed URI reference
pizzarr.html:7266:9 (ZarrArray.Rd:79): Warning: <a> illegal characters found in URI
pizzarr.html:7268:1 (ZarrArray.Rd:81): Warning: trimming empty <p>
* DONE
Status: 1 ERROR, 3 WARNINGs, 2 NOTEs