downloading reverse dependencies ... downloading codemetar_0.3.5.tar.gz ... ok downloading cymruservices_0.5.0.tar.gz ... ok downloading giacR_1.0.1.tar.gz ... ok downloading gwasrapidd_0.99.17.tar.gz ... ok downloading proffer_0.2.0.tar.gz ... ok downloading RBaseX_1.1.2.tar.gz ... ok downloading ropenblas_0.3.0.tar.gz ... ok downloading shinytest_1.6.1.tar.gz ... ok downloading shinytest2_0.3.2.tar.gz ... ok downloading wdpar_1.3.8.tar.gz ... ok downloading yfR_1.1.0.tar.gz ... ok downloading devtools_2.4.5.tar.gz ... ok downloading epwshiftr_0.1.4.tar.gz ... ok downloading pak_0.8.0.tar.gz ... ok downloading pkgcache_2.2.3.tar.gz ... ok downloading pkgdepends_0.8.0.tar.gz ... ok downloading pkgsearch_3.1.3.tar.gz ... ok downloading ps_1.8.0.tar.gz ... ok downloading remotes_2.5.0.tar.gz ... ok downloading vetiver_0.2.5.tar.gz ... ok downloading webdriver_1.0.6.tar.gz ... ok installing dependencies ‘asciicast’, ‘bundle’, ‘cereal’, ‘codemeta’, ‘concatenate’, ‘details’, ‘eplusr’, ‘foghorn’, ‘gmailr’, ‘humanize’, ‘luz’, ‘mlr3data’, ‘paws.machine.learning’, ‘pingr’, ‘pins’, ‘pkgbuild’, ‘pkgcache’, ‘pkgdepends’, ‘pkgsearch’, ‘prepr’, ‘profile’, ‘psychrolib’, ‘rapidoc’, ‘rhub’, ‘RProtoBuf’, ‘rsconnect’, ‘shinyvalidate’, ‘smdocker’, ‘stacks’, ‘withr’ Warning: package ‘prepr’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘paws.compute’, ‘paws.developer.tools’, ‘paws.management’, ‘paws.storage’, ‘paws.security.identity’ begin installing package ‘paws.compute’ begin installing package ‘paws.developer.tools’ begin installing package ‘paws.storage’ begin installing package ‘paws.management’ begin installing package ‘paws.security.identity’ begin installing package ‘codemeta’ begin installing package ‘concatenate’ begin installing package ‘RProtoBuf’ begin installing package ‘withr’ begin installing package ‘humanize’ begin installing package ‘psychrolib’ begin installing package ‘eplusr’ begin installing package ‘pkgcache’ begin installing package ‘pkgsearch’ begin installing package ‘cereal’ begin installing package ‘rapidoc’ begin installing package ‘mlr3data’ begin installing package ‘paws.machine.learning’ begin installing package ‘pingr’ begin installing package ‘pkgbuild’ begin installing package ‘rsconnect’ * installing *source* package ‘rapidoc’ ... ** package ‘rapidoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rapidoc) * installing *source* package ‘concatenate’ ... ** package ‘concatenate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (concatenate) * installing *source* package ‘codemeta’ ... ** package ‘codemeta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (codemeta) * installing *source* package ‘withr’ ... ** package ‘withr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (withr) begin installing package ‘shinyvalidate’ begin installing package ‘foghorn’ begin installing package ‘gmailr’ begin installing package ‘luz’ begin installing package ‘stacks’ begin installing package ‘details’ begin installing package ‘profile’ begin installing package ‘asciicast’ begin installing package ‘bundle’ begin installing package ‘pins’ * installing *source* package ‘pingr’ ... ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpIoHnF4/R.INSTALL343be12b6d431c/pingr/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dns.c -o dns.o dns.c: In function ‘r_nsl’: dns.c:363:15: warning: variable ‘mx’ set but not used [-Wunused-but-set-variable] 363 | u_int16_t mx; | ^~ gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c errors.c -o errors.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rping.c -o rping.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o pingr.so dns.o errors.o init.o rping.o -lresolv -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpIoHnF4/R.INSTALL343be12b6d431c/pingr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-pingr/00new/pingr/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pingr) * installing *source* package ‘cereal’ ... ** package ‘cereal’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cereal) * installing *source* package ‘humanize’ ... ** package ‘humanize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (humanize) * installing *source* package ‘pkgsearch’ ... ** package ‘pkgsearch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgsearch) * installing *source* package ‘pkgbuild’ ... ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgbuild) begin installing package ‘rhub’ * installing *source* package ‘shinyvalidate’ ... ** package ‘shinyvalidate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyvalidate) * installing *source* package ‘details’ ... ** package ‘details’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (details) * installing *source* package ‘bundle’ ... ** package ‘bundle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bundle) * installing *source* package ‘profile’ ... ** package ‘profile’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (profile) * installing *source* package ‘foghorn’ ... ** package ‘foghorn’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (foghorn) * installing *source* package ‘gmailr’ ... ** package ‘gmailr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gmailr) * installing *source* package ‘asciicast’ ... ** package ‘asciicast’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVF85in/R.INSTALL3440b822c57556/asciicast/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/processx/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c r.c -o r.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/processx/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c common.c -o common.o gcc-14 -Wl,--export-dynamic -fopenmp -Wl,-O1 -o rem r.o common.o -L"/home/hornik/tmp/R-d-gcc-14/lib" -lR -lpcre2-8 -ldeflate -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/processx/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c client.c -o client.o gcc-14 -shared -L"/home/hornik/tmp/R-d-gcc-14/lib" -Wl,-O1 -o asciicastclient.so \ client.o common.o \ -L"/home/hornik/tmp/R-d-gcc-14/lib" -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVF85in/R.INSTALL3440b822c57556/asciicast/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-asciicast/00new/asciicast ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (asciicast) * installing *source* package ‘rsconnect’ ... ** package ‘rsconnect’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rsconnect) * installing *source* package ‘psychrolib’ ... ** package ‘psychrolib’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1o7h2i/R.INSTALL343bd7ccf5e7c/psychrolib/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c bisection.cpp -o bisection.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o psychrolib.so RcppExports.o bisection.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1o7h2i/R.INSTALL343bd7ccf5e7c/psychrolib/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-psychrolib/00new/psychrolib/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (psychrolib) * installing *source* package ‘pins’ ... ** package ‘pins’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pins) * installing *source* package ‘mlr3data’ ... ** package ‘mlr3data’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mlr3data) * installing *source* package ‘stacks’ ... ** package ‘stacks’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stacks) * installing *source* package ‘rhub’ ... ** package ‘rhub’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rhub) * installing *source* package ‘luz’ ... ** package ‘luz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (luz) * installing *source* package ‘pkgcache’ ... ** package ‘pkgcache’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmps7phLq/R.INSTALL343bc81987f3fe/pkgcache/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c errors.c -o errors.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lib.c -o lib.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c winfiles.c -o winfiles.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o pkgcache.so errors.o init.o lib.o winfiles.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmps7phLq/R.INSTALL343bc81987f3fe/pkgcache/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-pkgcache/00new/pkgcache/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgcache) begin installing package ‘pkgdepends’ * installing *source* package ‘pkgdepends’ ... ** package ‘pkgdepends’ successfully unpacked and MD5 sums checked ** using staged installation *** Running ./configure ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgdepends) * installing *source* package ‘eplusr’ ... ** package ‘eplusr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (eplusr) * installing *source* package ‘paws.storage’ ... ** package ‘paws.storage’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.storage) * installing *source* package ‘paws.developer.tools’ ... ** package ‘paws.developer.tools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.developer.tools) * installing *source* package ‘paws.management’ ... ** package ‘paws.management’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.management) * installing *source* package ‘paws.compute’ ... ** package ‘paws.compute’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.compute) * installing *source* package ‘paws.security.identity’ ... ** package ‘paws.security.identity’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.security.identity) * installing *source* package ‘paws.machine.learning’ ... ** package ‘paws.machine.learning’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.machine.learning) begin installing package ‘smdocker’ * installing *source* package ‘smdocker’ ... ** package ‘smdocker’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smdocker) * installing *source* package ‘RProtoBuf’ ... ** package ‘RProtoBuf’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++-14 -std=gnu++17 accepts -g... yes checking for g++-14 -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... g++-14 -std=gnu++17 -E checking for gcc... gcc-14 checking whether the compiler supports GNU C... yes checking whether gcc-14 accepts -g... yes checking for gcc-14 option to enable C11 features... none needed checking whether the compiler supports GNU C++... (cached) yes checking whether g++-14 -std=gnu++17 accepts -g... (cached) yes checking for g++-14 -std=gnu++17 option to enable C++11 features... (cached) none needed checking for pkg-config... yes checking for protoc... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for google/protobuf/stubs/common.h... yes checking for google/protobuf/compiler/code_generator.h... yes checking if ProtoBuf version >= 2.2.0... yes checking for R... yes configure: creating ./config.status config.status: creating src/Makevars RProtoBuf 0.4.22 ================ cflags: -g -O2 -Wall -pedantic -mtune=native libs: -lprotobuf ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpL7lzlm/R.INSTALL343bbc33352e85/RProtoBuf/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ConnectionCopyingInputStream.cpp -o ConnectionCopyingInputStream.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ConnectionCopyingOutputStream.cpp -o ConnectionCopyingOutputStream.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ConnectionInputStream.cpp -o ConnectionInputStream.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ConnectionOutputStream.cpp -o ConnectionOutputStream.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DescriptorPoolLookup.cpp -o DescriptorPoolLookup.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RSourceTree.cpp -o RSourceTree.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RWarningErrorCollector.cpp -o RWarningErrorCollector.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RconnectionCopyingInputStream.cpp -o RconnectionCopyingInputStream.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ZeroCopyInputStreamWrapper.cpp -o ZeroCopyInputStreamWrapper.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ZeroCopyOutputStreamWrapper.cpp -o ZeroCopyOutputStreamWrapper.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c extensions.cpp -o extensions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c extractors.cpp -o extractors.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lookup.cpp -o lookup.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mutators.cpp -o mutators.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rprotobuf.cpp -o rprotobuf.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c streams.cpp -o streams.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_ArrayInputStream.cpp -o wrapper_ArrayInputStream.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_ArrayOutputStream.cpp -o wrapper_ArrayOutputStream.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_Descriptor.cpp -o wrapper_Descriptor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_EnumDescriptor.cpp -o wrapper_EnumDescriptor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_EnumValueDescriptor.cpp -o wrapper_EnumValueDescriptor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_FieldDescriptor.cpp -o wrapper_FieldDescriptor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_FileDescriptor.cpp -o wrapper_FileDescriptor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_Message.cpp -o wrapper_Message.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_MethodDescriptor.cpp -o wrapper_MethodDescriptor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_ServiceDescriptor.cpp -o wrapper_ServiceDescriptor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -g -O2 -Wall -pedantic -mtune=native -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrapper_ZeroCopyInputStream.cpp -o wrapper_ZeroCopyInputStream.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o RProtoBuf.so ConnectionCopyingInputStream.o ConnectionCopyingOutputStream.o ConnectionInputStream.o ConnectionOutputStream.o DescriptorPoolLookup.o RSourceTree.o RWarningErrorCollector.o RconnectionCopyingInputStream.o ZeroCopyInputStreamWrapper.o ZeroCopyOutputStreamWrapper.o extensions.o extractors.o init.o lookup.o mutators.o rprotobuf.o streams.o wrapper_ArrayInputStream.o wrapper_ArrayOutputStream.o wrapper_Descriptor.o wrapper_EnumDescriptor.o wrapper_EnumValueDescriptor.o wrapper_FieldDescriptor.o wrapper_FileDescriptor.o wrapper_Message.o wrapper_MethodDescriptor.o wrapper_ServiceDescriptor.o wrapper_ZeroCopyInputStream.o -lprotobuf -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpL7lzlm/R.INSTALL343bbc33352e85/RProtoBuf/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-RProtoBuf/00new/RProtoBuf/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RProtoBuf) checking pingr_2.0.4.tar.gz ... checking codemetar_0.3.5.tar.gz ... checking cymruservices_0.5.0.tar.gz ... checking giacR_1.0.1.tar.gz ... checking gwasrapidd_0.99.17.tar.gz ... checking proffer_0.2.0.tar.gz ... checking RBaseX_1.1.2.tar.gz ... checking ropenblas_0.3.0.tar.gz ... checking shinytest_1.6.1.tar.gz ... checking shinytest2_0.3.2.tar.gz ... checking wdpar_1.3.8.tar.gz ... checking yfR_1.1.0.tar.gz ... checking devtools_2.4.5.tar.gz ... checking epwshiftr_0.1.4.tar.gz ... checking pak_0.8.0.tar.gz ... checking pkgcache_2.2.3.tar.gz ... checking pkgdepends_0.8.0.tar.gz ... checking pkgsearch_3.1.3.tar.gz ... checking ps_1.8.0.tar.gz ... checking remotes_2.5.0.tar.gz ... checking vetiver_0.2.5.tar.gz ... checking webdriver_1.0.6.tar.gz ... Depends: Package: pingr Depends: R (>= 3.6) Imports: processx, utils Timings: user system elapsed pingr 22.358 3.344 26.368 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 6 15 Check results summary: pingr ... OK rdepends_codemetar ... NOTE * checking Rd cross-references ... NOTE rdepends_cymruservices ... OK rdepends_devtools ... NOTE * checking Rd cross-references ... NOTE rdepends_epwshiftr ... NOTE * checking Rd cross-references ... NOTE rdepends_giacR ... OK rdepends_gwasrapidd ... OK rdepends_pak ... OK rdepends_pkgcache ... OK rdepends_pkgdepends ... OK rdepends_pkgsearch ... OK rdepends_proffer ... OK rdepends_ps ... OK rdepends_RBaseX ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_remotes ... OK rdepends_ropenblas ... OK rdepends_shinytest ... OK rdepends_shinytest2 ... NOTE * checking Rd cross-references ... NOTE rdepends_vetiver ... OK rdepends_wdpar ... OK rdepends_webdriver ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_yfR ... OK