* using log directory 'd:/RCompile/CRANincoming/R-devel/piglet.Rcheck'
* using R Under development (unstable) (2024-04-23 r86473 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'piglet/DESCRIPTION' ... OK
* this is package 'piglet' version '1.0.4'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Ayelet Peres <peresay@biu.ac.il>'

New submission

Package was archived on CRAN

Possibly misspelled words in DESCRIPTION:
  AIRR (11:57)
  ASC (12:61)
  Genotypes (3:9)
  IGH (11:178)
  IGHV (12:156)
  Ig (2:30)
  Peres (15:14)
  al (15:24)
  et (15:21)
  genotype (11:23, 11:155, 12:84, 13:49)

CRAN repository db overrides:
  X-CRAN-Comment: Archived on 2023-11-01 as check problems were not
    corrected in time.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'piglet' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 13.2.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... WARNING
Output(s) listed in 'build/vignette.rds' but not in package:
  'inst/doc/PIgLET-vignette.html'
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [15s] OK
* checking whether the package can be loaded with stated dependencies ... [14s] OK
* checking whether the package can be unloaded cleanly ... [14s] OK
* checking whether the namespace can be loaded with stated dependencies ... [14s] OK
* checking whether the namespace can be unloaded cleanly ... [14s] OK
* checking loading without being on the library search path ... [15s] OK
* checking whether startup messages can be suppressed ... [14s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [62s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [32s] OK
* checking PDF version of manual ... [21s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE