* using log directory ‘/srv/hornik/tmp/CRAN_pretest/pharmaversesdtm.Rcheck’ * using R Under development (unstable) (2025-01-22 r87618) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.6 (1+b1) Debian flang-new version 19.1.6 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘pharmaversesdtm/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘pharmaversesdtm’ version ‘1.2.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/6s] OK * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘pharmaversesdtm’ can be installed ... [6s/6s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [2s/2s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [3s/3s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... NONE * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [1s/1s] NOTE Found the following HTML validation problems: ae.html:129:96 (ae.Rd:48): Warning: missing

before ae.html:130:1 (ae.Rd:48): Warning: inserting implicit

ae.html:130:1 (ae.Rd:48): Warning: trimming empty

cm.html:97:190 (cm.Rd:35): Warning: missing

before cm.html:98:1 (cm.Rd:35): Warning: inserting implicit

cm.html:98:1 (cm.Rd:35): Warning: trimming empty

dm.html:103:190 (dm.Rd:38): Warning: missing

before dm.html:104:1 (dm.Rd:38): Warning: inserting implicit

dm.html:104:1 (dm.Rd:38): Warning: trimming empty

ds.html:85:96 (ds.Rd:26): Warning: missing

before ds.html:86:1 (ds.Rd:26): Warning: inserting implicit

ds.html:86:1 (ds.Rd:26): Warning: trimming empty

ex.html:87:190 (ex.Rd:30): Warning: missing

before ex.html:88:1 (ex.Rd:30): Warning: inserting implicit

ex.html:88:1 (ex.Rd:30): Warning: trimming empty

lb.html:105:96 (lb.Rd:36): Warning: missing

before lb.html:106:1 (lb.Rd:36): Warning: inserting implicit

lb.html:106:1 (lb.Rd:36): Warning: trimming empty

mh.html:115:190 (mh.Rd:41): Warning: missing

before mh.html:116:1 (mh.Rd:41): Warning: inserting implicit

mh.html:116:1 (mh.Rd:41): Warning: trimming empty

pc.html:99:96 (pc.Rd:33): Warning: missing

before pc.html:100:1 (pc.Rd:33): Warning: inserting implicit

pc.html:100:1 (pc.Rd:33): Warning: trimming empty

pp.html:87:96 (pp.Rd:27): Warning: missing

before pp.html:88:1 (pp.Rd:27): Warning: inserting implicit

pp.html:88:1 (pp.Rd:27): Warning: trimming empty

rs_onco.html:97:108 (rs_onco.Rd:32): Warning: missing

before rs_onco.html:98:1 (rs_onco.Rd:32): Warning: inserting implicit

rs_onco.html:98:1 (rs_onco.Rd:32): Warning: trimming empty

sdg_db.html:63:190 (sdg_db.Rd:18): Warning: missing

before sdg_db.html:64:1 (sdg_db.Rd:18): Warning: inserting implicit

sdg_db.html:64:1 (sdg_db.Rd:18): Warning: trimming empty

suppae.html:73:194 (suppae.Rd:23): Warning: missing

before suppae.html:74:1 (suppae.Rd:23): Warning: inserting implicit

suppae.html:74:1 (suppae.Rd:23): Warning: trimming empty

suppds.html:71:194 (suppds.Rd:22): Warning: missing

before suppds.html:72:1 (suppds.Rd:22): Warning: inserting implicit

suppds.html:72:1 (suppds.Rd:22): Warning: trimming empty

supprs_onco_imwg.html:77:194 (supprs_onco_imwg.Rd:22): Warning: missing

before supprs_onco_imwg.html:78:1 (supprs_onco_imwg.Rd:22): Warning: inserting implicit

supprs_onco_imwg.html:78:1 (supprs_onco_imwg.Rd:22): Warning: trimming empty

supptr_onco.html:77:190 (supptr_onco.Rd:22): Warning: missing

before supptr_onco.html:78:1 (supptr_onco.Rd:22): Warning: inserting implicit

supptr_onco.html:78:1 (supptr_onco.Rd:22): Warning: trimming empty

ts.html:65:190 (ts.Rd:19): Warning: missing

before ts.html:66:1 (ts.Rd:19): Warning: inserting implicit

ts.html:66:1 (ts.Rd:19): Warning: trimming empty

* checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 NOTE