skip_if_not_installed("survival") lung <- survival::lung lung <- subset(lung, subset = ph.ecog %in% 0:2) lung$sex <- factor(lung$sex, labels = c("male", "female")) lung$ph.ecog <- factor(lung$ph.ecog, labels = c("good", "ok", "limited")) m1 <- survival::coxph(survival::Surv(time, status) ~ sex + age + ph.ecog, data = lung) test_that("r2", { expect_equal(r2_nagelkerke(m1), c(`Nagelkerke's R2` = 0.1203544), tolerance = 1e-3) expect_equal(r2(m1), list(R2 = c(`Nagelkerke's R2` = 0.1203544)), tolerance = 1e-3, ignore_attr = TRUE) }) test_that("model_performance", { perf <- suppressWarnings(model_performance(m1, verbose = FALSE)) expect_equal(perf$AIC, 1457.19458886438, tolerance = 1e-3) expect_equal(perf$BIC, 1469.5695896676, tolerance = 1e-3) expect_equal(perf$R2_Nagelkerke, 0.1203544, tolerance = 1e-3) expect_equal(perf$RMSE, 0.882014942836432, tolerance = 1e-3) }) test_that("r2", { expect_error(r2_xu(m1)) })