* using log directory ‘/srv/hornik/tmp/CRAN/peptoolkit.Rcheck’
* using R Under development (unstable) (2023-07-07 r84658)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 16.0.6 (3)
    GNU Fortran (Debian 12.3.0-4) 12.3.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘peptoolkit/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘peptoolkit’ version ‘0.0.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [2s/3s] NOTE
Maintainer: ‘Josep-Ramon Codina <jrc356@miami.edu>’

New submission

Possibly misspelled words in DESCRIPTION:
  OHE (16:70)
  PepToolKit (8:14)
  QSAR (17:61)
  bioinformatics (18:55)
  proteomics (10:57)

The Description field should not start with the package name,
  'This package' or similar.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘peptoolkit’ can be installed ... [1s/1s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Dependence on R version ‘4.3.1’ not with patchlevel 0
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [2s/2s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [11s/11s] NOTE
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
extract_features_QSAR 7.882  0.212   8.094
* checking PDF version of manual ... [2s/2s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 3 NOTEs