* using log directory 'd:/RCompile/CRANincoming/R-devel/penalizedcdf.Rcheck' * using R Under development (unstable) (2024-02-18 r85939 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'penalizedcdf/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'penalizedcdf' version '1.0.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [11s] NOTE Maintainer: 'Daniele Cuntrera ' Possibly misspelled words in DESCRIPTION: ANP (4:57, 16:26) gaussian (16:98) The Title field should be in title case. Current version is: 'Estimate a Penalized Linear Model and Gaussian Graphical Model using the Adaptive Non-Convex penalty function (ANP)' In title case that is: 'Estimate a Penalized Linear Model and Gaussian Graphical Model using the Adaptive Non-Convex Penalty Function (ANP)' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'penalizedcdf' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... WARNING Undocumented S4 classes: 'pLM.cv' 'pLM' 'pGGM' Undocumented S4 methods: generic 'BIC' and siglist 'pLM' generic 'checkKKT' and siglist 'pGGM' generic 'coef' and siglist 'pGGM' generic 'coef' and siglist 'pLM' generic 'plot' and siglist 'pGGM' generic 'plot' and siglist 'pLM' generic 'plot' and siglist 'pLM.cv' generic 'predict' and siglist 'pLM' generic 'print' and siglist 'pGGM' generic 'print' and siglist 'pLM' All user-level objects in a package (including S4 classes and methods) should have documentation entries. See chapter 'Writing R documentation files' in the 'Writing R Extensions' manual. * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking PDF version of manual ... [21s] OK * checking HTML version of manual ... OK * DONE Status: 1 WARNING, 1 NOTE