downloading reverse dependencies ... downloading KLINK_1.0.2.tar.gz ... ok downloading pedbuildr_0.3.0.tar.gz ... ok downloading pedFamilias_0.2.4.tar.gz ... ok downloading pedprobr_0.9.5.tar.gz ... ok downloading pedsuite_1.3.1.tar.gz ... ok downloading pedtools_2.8.0.tar.gz ... ok installing dependencies ‘dvir’, ‘forrel’, ‘ibdsim2’, ‘paramlink2’, ‘pedbuildr’, ‘pedFamilias’, ‘pedmut’, ‘segregatr’, ‘verbalisr’ begin installing package ‘pedmut’ * installing *source* package ‘pedmut’ ... ** this is package ‘pedmut’ version ‘0.9.0’ ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pedmut) begin installing package ‘verbalisr’ begin installing package ‘ibdsim2’ begin installing package ‘paramlink2’ begin installing package ‘segregatr’ begin installing package ‘pedFamilias’ * installing *source* package ‘segregatr’ ... ** this is package ‘segregatr’ version ‘0.4.0’ ** package ‘segregatr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (segregatr) * installing *source* package ‘verbalisr’ ... ** this is package ‘verbalisr’ version ‘0.7.2’ ** package ‘verbalisr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (verbalisr) begin installing package ‘forrel’ * installing *source* package ‘paramlink2’ ... ** this is package ‘paramlink2’ version ‘1.0.6’ ** package ‘paramlink2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paramlink2) * installing *source* package ‘pedFamilias’ ... ** this is package ‘pedFamilias’ version ‘0.2.4’ ** package ‘pedFamilias’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pedFamilias) * installing *source* package ‘forrel’ ... ** this is package ‘forrel’ version ‘1.7.1’ ** package ‘forrel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forrel) begin installing package ‘dvir’ begin installing package ‘pedbuildr’ * installing *source* package ‘ibdsim2’ ... ** this is package ‘ibdsim2’ version ‘2.2.0’ ** package ‘ibdsim2’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVY9mOj/R.INSTALL1e299386287d/ibdsim2/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ibdsim2.cpp -o ibdsim2.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o ibdsim2.so RcppExports.o ibdsim2.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVY9mOj/R.INSTALL1e299386287d/ibdsim2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ibdsim2/00new/ibdsim2/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ibdsim2) * installing *source* package ‘pedbuildr’ ... ** this is package ‘pedbuildr’ version ‘0.3.0’ ** package ‘pedbuildr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pedbuildr) * installing *source* package ‘dvir’ ... ** this is package ‘dvir’ version ‘3.3.0’ ** package ‘dvir’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dvir) checking pedmut_0.9.0.tar.gz ... checking KLINK_1.0.2.tar.gz ... checking pedbuildr_0.3.0.tar.gz ... checking pedFamilias_0.2.4.tar.gz ... checking pedprobr_0.9.5.tar.gz ... checking pedsuite_1.3.1.tar.gz ... checking pedtools_2.8.0.tar.gz ... Depends: Package: pedmut Depends: R (>= 4.2.0) Imports: lpSolve Timings: user system elapsed pedmut 21.25 3.187 27.049 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 1 5 Check results summary: pedmut ... OK rdepends_KLINK ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_pedbuildr ... OK rdepends_pedFamilias ... OK rdepends_pedprobr ... OK rdepends_pedsuite ... OK rdepends_pedtools ... OK