downloading reverse dependencies ... downloading cgmanalysis_2.7.7.tar.gz ... ok downloading ctmm_1.2.0.tar.gz ... ok downloading dataone_2.2.2.tar.gz ... ok downloading DIZtools_1.0.1.tar.gz ... ok downloading DQAgui_0.2.5.tar.gz ... ok downloading DQAstats_0.3.6.tar.gz ... ok downloading gatoRs_1.0.2.tar.gz ... ok downloading matman_1.1.3.tar.gz ... ok downloading mds_0.3.2.tar.gz ... ok downloading rang_0.3.0.tar.gz ... ok downloading rerddapXtracto_1.2.1.tar.gz ... ok downloading semnar_0.8.2.tar.gz ... ok downloading sendigR_1.0.0.tar.gz ... ok downloading shinytest_1.6.1.tar.gz ... ok downloading togglr_0.2.1.tar.gz ... ok downloading datefixR_1.7.0.tar.gz ... ok downloading fledge_0.1.2.tar.gz ... ok installing dependencies ‘cicerone’, ‘cleaR’, ‘cmocean’, ‘CoordinateCleaner’, ‘datapack’, ‘daterangepicker’, ‘DIZtools’, ‘DIZutils’, ‘DQAstats’, ‘fasttime’, ‘Gmedian’, ‘logr’, ‘move’, ‘parsedate’, ‘pkgsearch’, ‘plotdap’, ‘rerddap’, ‘ridigbio’, ‘spThin’, ‘urlshorteneR’ also installing the dependencies ‘RPresto’, ‘common’ begin installing package ‘RPresto’ begin installing package ‘common’ begin installing package ‘fasttime’ begin installing package ‘Gmedian’ begin installing package ‘move’ begin installing package ‘cleaR’ begin installing package ‘datapack’ begin installing package ‘daterangepicker’ begin installing package ‘ridigbio’ begin installing package ‘CoordinateCleaner’ begin installing package ‘pkgsearch’ begin installing package ‘spThin’ begin installing package ‘rerddap’ begin installing package ‘cmocean’ begin installing package ‘urlshorteneR’ begin installing package ‘parsedate’ begin installing package ‘cicerone’ * installing *source* package ‘cleaR’ ... ** package ‘cleaR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cleaR) * installing *source* package ‘fasttime’ ... ** package ‘fasttime’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptLVO1L/R.INSTALL11ff0810c8e796/fasttime/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tparse.c -o tparse.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o fasttime.so tparse.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptLVO1L/R.INSTALL11ff0810c8e796/fasttime/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fasttime/00new/fasttime/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fasttime) * installing *source* package ‘cmocean’ ... ** package ‘cmocean’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cmocean) * installing *source* package ‘parsedate’ ... ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpV9BKB1/R.INSTALL11ff2d3c26f176/parsedate/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c date.c -o date.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mingw.c -o mingw.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rdate.c -o rdate.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o parsedate.so date.o mingw.o rdate.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpV9BKB1/R.INSTALL11ff2d3c26f176/parsedate/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-parsedate/00new/parsedate/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (parsedate) begin installing package ‘DIZtools’ * installing *source* package ‘ridigbio’ ... ** package ‘ridigbio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ridigbio) * installing *source* package ‘common’ ... ** package ‘common’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (common) begin installing package ‘logr’ * installing *source* package ‘cicerone’ ... ** package ‘cicerone’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cicerone) * installing *source* package ‘daterangepicker’ ... ** package ‘daterangepicker’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (daterangepicker) * installing *source* package ‘pkgsearch’ ... ** package ‘pkgsearch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgsearch) * installing *source* package ‘spThin’ ... ** package ‘spThin’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spThin) * installing *source* package ‘logr’ ... ** package ‘logr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (logr) * installing *source* package ‘urlshorteneR’ ... ** package ‘urlshorteneR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (urlshorteneR) * installing *source* package ‘DIZtools’ ... ** package ‘DIZtools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DIZtools) * installing *source* package ‘rerddap’ ... ** package ‘rerddap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rerddap) begin installing package ‘plotdap’ * installing *source* package ‘datapack’ ... ** package ‘datapack’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (datapack) * installing *source* package ‘RPresto’ ... ** package ‘RPresto’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RPresto) begin installing package ‘DIZutils’ * installing *source* package ‘DIZutils’ ... ** package ‘DIZutils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DIZutils) begin installing package ‘DQAstats’ * installing *source* package ‘DQAstats’ ... ** package ‘DQAstats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DQAstats) * installing *source* package ‘CoordinateCleaner’ ... ** package ‘CoordinateCleaner’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CoordinateCleaner) * installing *source* package ‘Gmedian’ ... ** package ‘Gmedian’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQW2KGU/R.INSTALL11ff046ab84fd0/Gmedian/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RSpectra/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Gmedian.cpp -o Gmedian.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RSpectra/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RSpectra/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Weiszfeld.cpp -o Weiszfeld.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o Gmedian.so Gmedian.o RcppExports.o Weiszfeld.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQW2KGU/R.INSTALL11ff046ab84fd0/Gmedian/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Gmedian/00new/Gmedian/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Gmedian) * installing *source* package ‘plotdap’ ... ** package ‘plotdap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plotdap) * installing *source* package ‘move’ ... ** package ‘move’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCGHOMi/R.INSTALL11ff163ce20683/move/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bgbVar.c -o bgbVar.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c bgbVarRcpp.cpp -o bgbVarRcpp.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bgb_bbmm.c -o bgb_bbmm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c emd.cpp -o emd.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o move.so bgbVar.o bgbVarRcpp.o bgb_bbmm.o emd.o init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCGHOMi/R.INSTALL11ff163ce20683/move/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-move/00new/move/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading in method for ‘move’ with signature ‘x="telemetry",y="missing",time="missing",data="missing",proj="missing"’: no definition for class “telemetry” in method for ‘move’ with signature ‘x="track_xyt",y="missing",time="missing",data="missing",proj="missing"’: no definition for class “track_xyt” in method for ‘move’ with signature ‘x="track",y="missing",time="missing",data="missing",proj="missing"’: no definition for class “track” in method for ‘move’ with signature ‘x="binClstPath",y="missing",time="missing",data="missing",proj="missing"’: no definition for class “binClstPath” in method for ‘move’ with signature ‘x="binClstStck",y="missing",time="missing",data="missing",proj="missing"’: no definition for class “binClstStck” in method for ‘coerce’ with signature ‘"telemetry","Move"’: no definition for class “telemetry” in method for ‘coerce’ with signature ‘"track_xyt","Move"’: no definition for class “track_xyt” in method for ‘coerce’ with signature ‘"track","Move"’: no definition for class “track” in method for ‘coerce’ with signature ‘"binClstPath","Move"’: no definition for class “binClstPath” in method for ‘coerce’ with signature ‘"binClstStck","MoveStack"’: no definition for class “binClstStck” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (move) checking parsedate_1.3.2.tar.gz ... checking cgmanalysis_2.7.7.tar.gz ... checking ctmm_1.2.0.tar.gz ... checking dataone_2.2.2.tar.gz ... checking DIZtools_1.0.1.tar.gz ... checking DQAgui_0.2.5.tar.gz ... checking DQAstats_0.3.6.tar.gz ... checking gatoRs_1.0.2.tar.gz ... checking matman_1.1.3.tar.gz ... checking mds_0.3.2.tar.gz ... checking rang_0.3.0.tar.gz ... checking rerddapXtracto_1.2.1.tar.gz ... checking semnar_0.8.2.tar.gz ... checking sendigR_1.0.0.tar.gz ... checking shinytest_1.6.1.tar.gz ... checking togglr_0.2.1.tar.gz ... checking datefixR_1.7.0.tar.gz ... checking fledge_0.1.2.tar.gz ... Depends: Timings: user system elapsed parsedate 18.658 3.106 22.774 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 3 14 Check results summary: parsedate ... OK rdepends_cgmanalysis ... OK rdepends_ctmm ... NOTE * checking Rd files ... [1s/1s] NOTE * checking Rd cross-references ... NOTE rdepends_dataone ... NOTE * checking Rd files ... [1s/1s] NOTE * checking Rd cross-references ... NOTE rdepends_datefixR ... OK rdepends_DIZtools ... OK rdepends_DQAgui ... OK rdepends_DQAstats ... OK rdepends_fledge ... NOTE * checking Rd cross-references ... NOTE rdepends_gatoRs ... OK rdepends_matman ... OK rdepends_mds ... OK rdepends_rang ... OK rdepends_rerddapXtracto ... OK rdepends_semnar ... OK rdepends_sendigR ... OK rdepends_shinytest ... OK rdepends_togglr ... OK