* using log directory ‘/srv/hornik/tmp/CRAN_pretest/paramix.Rcheck’
* using R Under development (unstable) (2024-12-02 r87417)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.1 (1)
    Debian flang-new version 19.1.1 (1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘paramix/DESCRIPTION’ ... OK
* this is package ‘paramix’ version ‘0.0.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/5s] NOTE
Maintainer: ‘Carl Pearson <carl.ab.pearson@gmail.com>’

New submission

Possibly misspelled words in DESCRIPTION:
  Disaggregate (2:22)
  disaggregating (13:9)
  upscaling (15:68)
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘paramix’ can be installed ... [1s/1s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [2s/2s] NOTE
distill_summary: no visible binding for global variable ‘partition’
Undefined global functions or variables:
  partition
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking include directives in Makefiles ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [0s/0s] ERROR
Running examples in ‘paramix-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: alembic
> ### Title: Create the Blending and Distilling Object
> ### Aliases: alembic
> 
> ### ** Examples
> 
> ifr_levin <- function(age_in_years) {
+   (10^(-3.27 + 0.0524 * age_in_years))/100
+ }
> age_limits <- c(seq(0, 69, by = 5), 70, 80, 100)
> age_pyramid <- data.frame(
+   from = 0:100, weight = ifelse(0:100 < 65, 1, .99^(0:100-64))
+ ) # flat age distribution, then 1% annual deaths
> ifr_alembic <- alembic(ifr_levin, age_pyramid, age_limits, 0:100)
Error in to_function(f_pop, range(overall_partition), pop_interp_opts) : 
  for integral data, the final entry should be 0; got instead: 0.696413218049573
Calls: alembic -> to_function
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [1s/1s] OK
  Running ‘testthat.R’ [1s/1s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [3s/3s] ERROR
Error(s) in re-building vignettes:
  ...
--- re-building ‘intro.Rmd’ using rmarkdown
** Processing: /srv/hornik/tmp/CRAN_pretest/paramix.Rcheck/vign_test/paramix/vignettes/intro_files/figure-html/unnamed-chunk-2-1.png
4800x1800 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 84388 bytes
Input file size = 85366 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 82348
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 60011
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5		IDAT size = 58691

Selecting parameters:
  zc = 9  zm = 8  zs = 3  f = 5		IDAT size = 58691

Output IDAT size = 58691 bytes (25697 bytes decrease)
Output file size = 58769 bytes (26597 bytes = 31.16% decrease)


Quitting from lines 90-114 [create_pops] (intro.Rmd)
Error: processing vignette 'intro.Rmd' failed with diagnostics:
there is no package called 'wpp2022'
--- failed re-building ‘intro.Rmd’

SUMMARY: processing the following file failed:
  ‘intro.Rmd’

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [2s/2s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 ERRORs, 2 NOTEs