data(iris) model <- lm(Sepal.Length ~ Species, data = iris) test_that("p_function ci-levels", { out <- p_function(model) expect_identical(dim(out), c(12L, 5L)) expect_equal( out$CI, c(0.25, 0.25, 0.25, 0.5, 0.5, 0.5, 0.75, 0.75, 0.75, 0.95, 0.95, 0.95), tolerance = 1e-4 ) ref <- ci(model) expect_equal( out$CI_low[out$CI == 0.95], ref$CI_low, tolerance = 1e-4 ) ref <- ci(model, ci = 0.5) expect_equal( out$CI_low[out$CI == 0.5], ref$CI_low, tolerance = 1e-4 ) out <- p_function(model, ci_levels = c(0.3, 0.6, 0.9)) expect_equal( out$CI, c(0.3, 0.3, 0.3, 0.6, 0.6, 0.6, 0.9, 0.9, 0.9), tolerance = 1e-4 ) }) test_that("p_function keep-drop", { out <- p_function(model, keep = "Speciesversicolor") expect_identical(dim(out), c(4L, 5L)) expect_equal( out$CI, c(0.25, 0.5, 0.75, 0.95), tolerance = 1e-4 ) expect_identical( out$Parameter, c( "Speciesversicolor", "Speciesversicolor", "Speciesversicolor", "Speciesversicolor" ) ) }) test_that("p_function print", { out <- p_function(model) ref <- capture.output(print(out)) expect_identical( ref, c( "Consonance Function", "", "Parameter | 25% CI | 50% CI | 75% CI | 95% CI", "--------------------------------------------------------------------------------", "(Intercept) | [4.98, 5.03] | [4.96, 5.06] | [4.92, 5.09] | [4.86, 5.15]", "Species [versicolor] | [0.90, 0.96] | [0.86, 1.00] | [0.81, 1.05] | [0.73, 1.13]", "Species [virginica] | [1.55, 1.61] | [1.51, 1.65] | [1.46, 1.70] | [1.38, 1.79]" ) ) })