library(pROC) data(aSAH) context("roc.utils.percent") test_that("roc_utils_topercent works on full AUC", { expect_equal_ignore_call(pROC:::roc_utils_topercent.roc(r.wfns), r.wfns.percent) }) test_that("roc_utils_unpercent works on full AUC", { expect_equal_ignore_call(pROC:::roc_utils_unpercent.roc(r.wfns.percent), r.wfns) }) test_that("roc_utils_topercent works on partial AUC", { expect_equal_ignore_call(pROC:::roc_utils_topercent.roc(r.wfns.partial1), r.wfns.percent.partial1) }) test_that("roc_utils_unpercent works on partial AUC", { expect_equal_ignore_call(pROC:::roc_utils_unpercent.roc(r.wfns.percent.partial1), r.wfns.partial1) }) test_that_no_progress("roc_utils_topercent works with CI", { r <- roc(aSAH$outcome, aSAH$wfns, ci=TRUE) r.percent <- roc(aSAH$outcome, aSAH$wfns, ci=TRUE, percent = TRUE) expect_equal_ignore_call(pROC:::roc_utils_topercent.roc(r), r.percent) }) test_that_no_progress("roc_utils_unpercent works with CI", { r <- roc(aSAH$outcome, aSAH$wfns, ci=TRUE) r.percent <- roc(aSAH$outcome, aSAH$wfns, ci=TRUE, percent = TRUE) expect_equal_ignore_call(pROC:::roc_utils_unpercent.roc(r.percent), r) }) test_that("roc_utils_topercent works without AUC", { r <- roc(aSAH$outcome, aSAH$wfns, auc=FALSE) r.percent <- roc(aSAH$outcome, aSAH$wfns, auc=FALSE, percent = TRUE) expect_equal_ignore_call(pROC:::roc_utils_topercent.roc(r), r.percent) }) test_that("roc_utils_unpercent works without AUC", { r <- roc(aSAH$outcome, aSAH$wfns, auc=FALSE) r.percent <- roc(aSAH$outcome, aSAH$wfns, auc=FALSE, percent = TRUE) expect_equal_ignore_call(pROC:::roc_utils_unpercent.roc(r.percent), r) }) test_that_no_progress("roc_utils_topercent works with different types of CI", { r <- roc(aSAH$outcome, aSAH$wfns, ci=TRUE) r.percent <- roc(aSAH$outcome, aSAH$wfns, ci=TRUE, percent = TRUE) expect_equal_ignore_call(pROC:::roc_utils_topercent.roc(r), r.percent) }) test_that_no_progress("roc.utils.to/unpercent works with ci .thresholds, .sp, .se", { skip_slow() for (of in c("thresholds", "sp", "se")) { set.seed(42) r <- roc(aSAH$outcome, aSAH$wfns, ci=TRUE, of = of) set.seed(42) r.percent <- roc(aSAH$outcome, aSAH$wfns, ci=TRUE, percent = TRUE, of = of) expect_equal_ignore_call(pROC:::roc_utils_unpercent.roc(r.percent), r) expect_equal_ignore_call(pROC:::roc_utils_topercent.roc(r), r.percent) } })