* installing *source* package ‘oppr’ ... ** this is package ‘oppr’ version ‘1.0.5’ ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3+b1)’ using C++ compiler: ‘Debian clang version 19.1.7 (3+b1)’ clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c functions.cpp -o functions.o clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c optimization_problem.cpp -o optimization_problem.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_add_raw_data.cpp -o rcpp_add_raw_data.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_apply_decisions.cpp -o rcpp_apply_decisions.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_apply_feature_weights.cpp -o rcpp_apply_feature_weights.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_apply_locked_constraints.cpp -o rcpp_apply_locked_constraints.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_apply_max_phylo_div_objective.cpp -o rcpp_apply_max_phylo_div_objective.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_apply_max_targets_met_objective.cpp -o rcpp_apply_max_targets_met_objective.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_apply_min_set_objective.cpp -o rcpp_apply_min_set_objective.o rcpp_apply_min_set_objective.cpp:22:15: warning: variable 'r' set but not used [-Wunused-but-set-variable] 22 | std::size_t r = std::find(ptr->_row_ids.begin(), ptr->_row_ids.end(), "c4") - | ^ 1 warning generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_branch_matrix.cpp -o rcpp_branch_matrix.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_branch_order.cpp -o rcpp_branch_order.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_evaluate.cpp -o rcpp_evaluate.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_funded_projects.cpp -o rcpp_funded_projects.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_heuristic_solution.cpp -o rcpp_heuristic_solution.o rcpp_heuristic_solution.cpp:206:15: warning: variable 'n_remaining_actions' set but not used [-Wunused-but-set-variable] 206 | std::size_t n_remaining_actions = remaining_actions.n_nonzero; | ^ 1 warning generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -DARMA_NO_DEBUG=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_random_solution.cpp -o rcpp_random_solution.o clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o oppr.so RcppExports.o functions.o init.o optimization_problem.o rcpp_add_raw_data.o rcpp_apply_decisions.o rcpp_apply_feature_weights.o rcpp_apply_locked_constraints.o rcpp_apply_max_phylo_div_objective.o rcpp_apply_max_targets_met_objective.o rcpp_apply_min_set_objective.o rcpp_branch_matrix.o rcpp_branch_order.o rcpp_evaluate.o rcpp_funded_projects.o rcpp_heuristic_solution.o rcpp_random_solution.o -L/home/hornik/tmp/R/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/oppr.Rcheck/00LOCK-oppr/00new/oppr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (oppr)