R Under development (unstable) (2024-01-07 r85787 ucrt) -- "Unsuffered Consequences"
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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(ontophylo)
> 
> test_check("ontophylo")
[ FAIL 0 | WARN 0 | SKIP 33 | PASS 37 ]

══ Skipped tests (33) ══════════════════════════════════════════════════════════
• Skipped. This is just an internal wrapper function. (3):
  'test_KDE_unnorm_trunc_Markov.R:5:5',
  'test_KDE_unnormalized_scalar_Markov_kernel.R:5:5', 'test_join_edges.R:5:5'
• This function cannot be appropriately unit tested in a reasonable amount of
  time. (23): 'test_MultiScale.simmap.R:5:5', 'test_add_noise_MD.R:5:5',
  'test_add_pseudodata.R:5:5', 'test_derivative_KDE.R:5:5',
  'test_edge_profiles4plotting.R:5:5', 'test_estimate_band_W.R:5:5',
  'test_estimate_edge_KDE.R:5:5',
  'test_estimate_edge_KDE_Markov_kernel_unnorm.R:5:5',
  'test_get_path_edges.R:5:5', 'test_get_state.R:5:5',
  'test_get_states_path.R:5:5', 'test_integrate_edge_KDE.R:5:5',
  'test_loess_smoothing_KDE.R:5:5', 'test_make_contMap_KDE.R:5:5',
  'test_make_data_NHPP_KDE_Markov_kernel.R:5:5',
  'test_make_data_NHPP_over_edge_MarkovKDE.R:5:5',
  'test_make_postPois_KDE.R:5:5', 'test_normalize_KDE.R:5:5',
  'test_path_hamming.R:5:5', 'test_path_hamming_over_all_edges.R:5:5',
  'test_path_hamming_over_trees_KDE.R:5:5', 'test_posterior_lambda_KDE.R:5:5',
  'test_posterior_lambda_KDE_Distr.R:5:5'
• This is a complex visualization function that cannot be appropriately unit
  tested. (4): 'test_anat_plot.R:4:5', 'test_edgeplot.R:4:5',
  'test_make_pic.R:4:5', 'test_mds_plot.R:5:5'
• This is a plotting function that cannot be appropriately unit tested. (1):
  'test_color.bar.R:5:5'
• This is just a simple function for reading a text file that cannot be
  appropriately unit tested. (1): 'test_Read_Simmap_Rev.R:4:5'
• This is just a wrapper function. All dependent functions were already unit
  tested. (1): 'test_pNHPP.R:4:5'

[ FAIL 0 | WARN 0 | SKIP 33 | PASS 37 ]
> 
> proc.time()
   user  system elapsed 
   5.89    0.81    6.68