installing dependencies ‘dendextend’, ‘dplyr’, ‘ggplot2’, ‘ggpubr’, ‘htmlwidgets’, ‘knitr’, ‘plotly’, ‘princurve’, ‘RColorBrewer’, ‘Rcpp’, ‘rebus’, ‘reshape2’, ‘rmarkdown’, ‘smacof’, ‘stringr’, ‘testthat’, ‘tidyr’, ‘vcfR’ also installing the dependencies ‘bit’, ‘prettyunits’, ‘bit64’, ‘progress’, ‘ucminf’, ‘clipr’, ‘vroom’, ‘tzdb’, ‘ordinal’, ‘forcats’, ‘hms’, ‘readr’, ‘rbibutils’, ‘Deriv’, ‘modelr’, ‘microbenchmark’, ‘sys’, ‘shape’, ‘pan’, ‘jomo’, ‘haven’, ‘Rdpack’, ‘numDeriv’, ‘doBy’, ‘SparseM’, ‘MatrixModels’, ‘askpass’, ‘checkmate’, ‘rstudioapi’, ‘glmnet’, ‘mitml’, ‘gtools’, ‘minqa’, ‘nloptr’, ‘reformulas’, ‘RcppEigen’, ‘backports’, ‘carData’, ‘abind’, ‘pbkrtest’, ‘quantreg’, ‘rappdirs’, ‘crayon’, ‘farver’, ‘labeling’, ‘fansi’, ‘pkgconfig’, ‘curl’, ‘mime’, ‘openssl’, ‘fastmap’, ‘later’, ‘proxy’, ‘htmlTable’, ‘Formula’, ‘mice’, ‘gdata’, ‘lme4’, ‘iterators’, ‘utf8’, ‘broom’, ‘corrplot’, ‘car’, ‘permute’, ‘cachem’, ‘memoise’, ‘sass’, ‘fs’, ‘pkgbuild’, ‘rprojroot’, ‘diffobj’, ‘cli’, ‘glue’, ‘gtable’, ‘isoband’, ‘lifecycle’, ‘rlang’, ‘scales’, ‘tibble’, ‘vctrs’, ‘withr’, ‘httr’, ‘jsonlite’, ‘magrittr’, ‘digest’, ‘viridisLite’, ‘base64enc’, ‘htmltools’, ‘lazyeval’, ‘crosstalk’, ‘purrr’, ‘data.table’, ‘promises’, ‘plyr’, ‘plotrix’, ‘colorspace’, ‘e1071’, ‘polynom’, ‘Hmisc’, ‘nnls’, ‘weights’, ‘ellipse’, ‘wordcloud’, ‘foreach’, ‘doParallel’, ‘generics’, ‘pillar’, ‘R6’, ‘tidyselect’, ‘cpp11’, ‘yaml’, ‘ggrepel’, ‘ggsci’, ‘cowplot’, ‘ggsignif’, ‘gridExtra’, ‘rstatix’, ‘viridis’, ‘rebus.base’, ‘rebus.datetimes’, ‘rebus.numbers’, ‘rebus.unicode’, ‘ape’, ‘memuse’, ‘pinfsc50’, ‘vegan’, ‘evaluate’, ‘highr’, ‘xfun’, ‘bslib’, ‘fontawesome’, ‘jquerylib’, ‘tinytex’, ‘brio’, ‘callr’, ‘desc’, ‘pkgload’, ‘praise’, ‘processx’, ‘ps’, ‘waldo’, ‘stringi’ begin installing package ‘bit’ begin installing package ‘prettyunits’ begin installing package ‘ucminf’ begin installing package ‘clipr’ begin installing package ‘rbibutils’ begin installing package ‘Deriv’ begin installing package ‘microbenchmark’ begin installing package ‘sys’ begin installing package ‘shape’ begin installing package ‘pan’ begin installing package ‘numDeriv’ begin installing package ‘SparseM’ begin installing package ‘MatrixModels’ begin installing package ‘rstudioapi’ begin installing package ‘gtools’ begin installing package ‘nloptr’ begin installing package ‘backports’ begin installing package ‘carData’ begin installing package ‘abind’ begin installing package ‘rappdirs’ begin installing package ‘crayon’ begin installing package ‘farver’ begin installing package ‘labeling’ begin installing package ‘fansi’ begin installing package ‘pkgconfig’ begin installing package ‘curl’ begin installing package ‘mime’ begin installing package ‘fastmap’ * installing *source* package ‘pkgconfig’ ... ** this is package ‘pkgconfig’ version ‘2.0.3’ ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgconfig) begin installing package ‘proxy’ * installing *source* package ‘numDeriv’ ... ** this is package ‘numDeriv’ version ‘2016.8-1.1’ ** package ‘numDeriv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (numDeriv) begin installing package ‘Formula’ * installing *source* package ‘clipr’ ... ** this is package ‘clipr’ version ‘0.8.0’ ** package ‘clipr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clipr) begin installing package ‘iterators’ * installing *source* package ‘mime’ ... ** this is package ‘mime’ version ‘0.13’ ** package ‘mime’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBCTpDt/R.INSTALL2a59a16dd75c15/mime/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rawmatch.c -o rawmatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o mime.so init.o rawmatch.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBCTpDt/R.INSTALL2a59a16dd75c15/mime/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-mime/00new/mime/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mime) begin installing package ‘utf8’ * installing *source* package ‘rappdirs’ ... ** this is package ‘rappdirs’ version ‘0.3.3’ ** package ‘rappdirs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJlo4rX/R.INSTALL2a598f2fc8fe75/rappdirs/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c win-path.c -o win-path.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rappdirs.so init.o win-path.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJlo4rX/R.INSTALL2a598f2fc8fe75/rappdirs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rappdirs/00new/rappdirs/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rappdirs) begin installing package ‘corrplot’ * installing *source* package ‘sys’ ... ** this is package ‘sys’ version ‘3.4.3’ ** package ‘sys’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpn5hDc0/R.INSTALL2a595c7f1a0310/sys/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c exec.c -o exec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o sys.so exec.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpn5hDc0/R.INSTALL2a595c7f1a0310/sys/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-sys/00new/sys/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sys) begin installing package ‘permute’ * installing *source* package ‘prettyunits’ ... ** this is package ‘prettyunits’ version ‘1.2.0’ ** package ‘prettyunits’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prettyunits) begin installing package ‘fs’ * installing *source* package ‘ucminf’ ... ** this is package ‘ucminf’ version ‘1.2.2’ ** package ‘ucminf’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpU5I0vb/R.INSTALL2a594146ad56c3/ucminf/src' flang-new-19 -fpic -g -O2 -c fortran.f -o fortran.o ./fortran.f:177:9: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DAXPY(N, -1D0, X,1, W,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./fortran.f:175:9: previous reference to 'daxpy' CALL DAXPY(N, A, W(HN),1, X,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./fortran.f:189:9: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #5: incompatible dummy data object shapes CALL DAXPY(N, -1D0,W(GN),1, W(GP),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./fortran.f:175:9: previous reference to 'daxpy' CALL DAXPY(N, A, W(HN),1, X,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./fortran.f:196:11: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DAXPY(N, .5D0*A, W,1, W(HN),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./fortran.f:175:9: previous reference to 'daxpy' CALL DAXPY(N, A, W(HN),1, X,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c interface.c -o interface.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ucminf.so fortran.o init.o interface.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpU5I0vb/R.INSTALL2a594146ad56c3/ucminf/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ucminf/00new/ucminf/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ucminf) begin installing package ‘rprojroot’ * installing *source* package ‘abind’ ... ** this is package ‘abind’ version ‘1.4-8’ ** package ‘abind’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (abind) begin installing package ‘cli’ * installing *source* package ‘labeling’ ... ** this is package ‘labeling’ version ‘0.4.3’ ** package ‘labeling’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (labeling) begin installing package ‘glue’ * installing *source* package ‘carData’ ... ** this is package ‘carData’ version ‘3.0-5’ ** package ‘carData’ successfully unpacked and MD5 sums checked ** using staged installation ** data *** moving datasets to lazyload DB ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (carData) begin installing package ‘isoband’ * installing *source* package ‘backports’ ... ** this is package ‘backports’ version ‘1.5.0’ ** package ‘backports’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpmRFhil/R.INSTALL2a598511d2d45f/backports/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsElt.c -o dotsElt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsLength.c -o dotsLength.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsNames.c -o dotsNames.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o backports.so dotsElt.o dotsLength.o dotsNames.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpmRFhil/R.INSTALL2a598511d2d45f/backports/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-backports/00new/backports/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (backports) begin installing package ‘rlang’ * installing *source* package ‘shape’ ... ** this is package ‘shape’ version ‘1.4.6.1’ ** package ‘shape’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shape) begin installing package ‘withr’ * installing *source* package ‘crayon’ ... ** this is package ‘crayon’ version ‘1.5.3’ ** package ‘crayon’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crayon) begin installing package ‘jsonlite’ * installing *source* package ‘microbenchmark’ ... ** this is package ‘microbenchmark’ version ‘1.5.0’ ** package ‘microbenchmark’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 option to enable C11 features... -std=gnu11 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for sys/time.h... yes checking for uint64_t... yes checking for error_at_line... yes checking for mach_absolute_time... no checking for library containing clock_gettime... none required checking for best clockid_t to use with clock_gettime... CLOCK_MONOTONIC_RAW configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/config.h ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpueF1zg/R.INSTALL2a59653e6546f6/microbenchmark/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -D_POSIX_C_SOURCE=200112L -DHAVE_CONFIG_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c do_nothing.c -o do_nothing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -D_POSIX_C_SOURCE=200112L -DHAVE_CONFIG_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -D_POSIX_C_SOURCE=200112L -DHAVE_CONFIG_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nanotimer.c -o nanotimer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o microbenchmark.so do_nothing.o init.o nanotimer.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpueF1zg/R.INSTALL2a59653e6546f6/microbenchmark/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-microbenchmark/00new/microbenchmark/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (microbenchmark) begin installing package ‘magrittr’ * installing *source* package ‘Formula’ ... ** this is package ‘Formula’ version ‘1.2-5’ ** package ‘Formula’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Formula) begin installing package ‘digest’ * installing *source* package ‘gtools’ ... ** this is package ‘gtools’ version ‘3.9.5’ ** package ‘gtools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZfiKW6/R.INSTALL2a597f335398c8/gtools/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c roman2int.c -o roman2int.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c setTCPNoDelay.c -o setTCPNoDelay.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o gtools.so init.o roman2int.o setTCPNoDelay.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZfiKW6/R.INSTALL2a597f335398c8/gtools/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-gtools/00new/gtools/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtools) begin installing package ‘viridisLite’ * installing *source* package ‘rstudioapi’ ... ** this is package ‘rstudioapi’ version ‘0.17.1’ ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rstudioapi) begin installing package ‘base64enc’ * installing *source* package ‘pan’ ... ** this is package ‘pan’ version ‘1.9’ ** package ‘pan’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZSJvqG/R.INSTALL2a596d2165962f/pan/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c package_native_routine_registration_skeleton.c -o package_native_routine_registration_skeleton.o flang-new-19 -fpic -g -O2 -c pan.f -o pan.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o pan.so package_native_routine_registration_skeleton.o pan.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZSJvqG/R.INSTALL2a596d2165962f/pan/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-pan/00new/pan/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pan) begin installing package ‘lazyeval’ * installing *source* package ‘iterators’ ... ** this is package ‘iterators’ version ‘1.0.14’ ** package ‘iterators’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iterators) begin installing package ‘data.table’ * installing *source* package ‘fastmap’ ... ** this is package ‘fastmap’ version ‘1.2.0’ ** package ‘fastmap’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpP7BDBu/R.INSTALL2a59a3667237ce/fastmap/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Ilib/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c fastmap.cpp -o fastmap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Ilib/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fastmap.so fastmap.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpP7BDBu/R.INSTALL2a59a3667237ce/fastmap/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fastmap/00new/fastmap/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastmap) begin installing package ‘plotrix’ * installing *source* package ‘nloptr’ ... ** this is package ‘nloptr’ version ‘2.2.1’ ** package ‘nloptr’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -E checking whether the compiler supports GNU C++... (cached) yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... (cached) yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... (cached) none needed checking for pkg-config... /usr/bin/pkg-config checking if pkg-config knows NLopt... yes checking for pkg-config checking NLopt version... >= 2.7.0 Copying headers found in /usr/include into inst/include configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzfUfHv/R.INSTALL2a598169cd2ca2/nloptr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c dummy.cpp -o dummy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init_nloptr.c -o init_nloptr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nloptr.c -o nloptr.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o nloptr.so dummy.o init_nloptr.o nloptr.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -lnlopt -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzfUfHv/R.INSTALL2a598169cd2ca2/nloptr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-nloptr/00new/nloptr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nloptr) begin installing package ‘colorspace’ * installing *source* package ‘Deriv’ ... ** this is package ‘Deriv’ version ‘4.1.6’ ** package ‘Deriv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Deriv) begin installing package ‘polynom’ * installing *source* package ‘rprojroot’ ... ** this is package ‘rprojroot’ version ‘2.0.4’ ** package ‘rprojroot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rprojroot) begin installing package ‘nnls’ * installing *source* package ‘curl’ ... ** this is package ‘curl’ version ‘6.2.2’ ** package ‘curl’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 Using PKG_LIBS=-lcurl Found recent recent version of libcurl ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfPHFsQ/R.INSTALL2a599f1ea36a74/curl/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c callbacks.c -o callbacks.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c curl.c -o curl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c download.c -o download.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c dryrun.c -o dryrun.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c escape.c -o escape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fetch.c -o fetch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c findport.c -o findport.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c form.c -o form.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c getdate.c -o getdate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c handle.c -o handle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ieproxy.c -o ieproxy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c interrupt.c -o interrupt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c multi.c -o multi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c nslookup.c -o nslookup.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c options.c -o options.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c reflist.c -o reflist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c split.c -o split.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ssl.c -o ssl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typechecking.c -o typechecking.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c urlparser.c -o urlparser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c winidn.c -o winidn.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c writer.c -o writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o curl.so callbacks.o curl.o download.o dryrun.o escape.o fetch.o findport.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o options.o reflist.o split.o ssl.o typechecking.o urlparser.o utils.o version.o winidn.o writer.o -lcurl -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfPHFsQ/R.INSTALL2a599f1ea36a74/curl/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-curl/00new/curl/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (curl) begin installing package ‘ellipse’ * installing *source* package ‘glue’ ... ** this is package ‘glue’ version ‘1.8.0’ ** package ‘glue’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnorSGF/R.INSTALL2a64d122ae6f34/glue/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c glue.c -o glue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c trim.c -o trim.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o glue.so glue.o init.o trim.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnorSGF/R.INSTALL2a64d122ae6f34/glue/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-glue/00new/glue/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glue) begin installing package ‘generics’ * installing *source* package ‘fansi’ ... ** this is package ‘fansi’ version ‘1.0.6’ ** package ‘fansi’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmph8pw9r/R.INSTALL2a599d61d23c5/fansi/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c assumptions.c -o assumptions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c carry.c -o carry.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c has.c -o has.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c nchar.c -o nchar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c normalize.c -o normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c read.c -o read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rnchar.c -o rnchar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c state.c -o state.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c strip.c -o strip.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c substr.c -o substr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c tabs.c -o tabs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c tohtml.c -o tohtml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c trimws.c -o trimws.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c unhandled.c -o unhandled.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c wrap.c -o wrap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c write.c -o write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fansi.so assumptions.o carry.o has.o init.o nchar.o normalize.o read.o rnchar.o state.o strip.o substr.o tabs.o tohtml.o trimws.o unhandled.o utf8.o utils.o wrap.o write.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmph8pw9r/R.INSTALL2a599d61d23c5/fansi/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fansi/00new/fansi/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fansi) begin installing package ‘R6’ * installing *source* package ‘magrittr’ ... ** this is package ‘magrittr’ version ‘2.0.3’ ** package ‘magrittr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeHfojL/R.INSTALL2a663d4ec61bee/magrittr/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pipe.c -o pipe.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o magrittr.so pipe.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeHfojL/R.INSTALL2a663d4ec61bee/magrittr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-magrittr/00new/magrittr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (magrittr) begin installing package ‘cpp11’ * installing *source* package ‘proxy’ ... ** this is package ‘proxy’ version ‘0.4-27’ ** package ‘proxy’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUY9RR9/R.INSTALL2a62aa7c273aa3/proxy/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c apply.c -o apply.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c arrayIndex.c -o arrayIndex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c distance.c -o distance.o distance.c:429:2: warning: add explicit braces to avoid dangling else [-Wdangling-else] 429 | else | ^ distance.c:476:2: warning: add explicit braces to avoid dangling else [-Wdangling-else] 476 | else | ^ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dll.c -o dll.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c util.c -o util.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o proxy.so apply.o arrayIndex.o distance.o dll.o util.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUY9RR9/R.INSTALL2a62aa7c273aa3/proxy/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-proxy/00new/proxy/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (proxy) begin installing package ‘yaml’ * installing *source* package ‘viridisLite’ ... ** this is package ‘viridisLite’ version ‘0.4.2’ ** package ‘viridisLite’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (viridisLite) begin installing package ‘rebus.base’ * installing *source* package ‘corrplot’ ... ** this is package ‘corrplot’ version ‘0.95’ ** package ‘corrplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (corrplot) begin installing package ‘memuse’ * installing *source* package ‘base64enc’ ... ** this is package ‘base64enc’ version ‘0.1-3’ ** package ‘base64enc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7Pu2oU/R.INSTALL2a66de52650012/base64enc/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c uriencode.c -o uriencode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o base64enc.so base64.o uriencode.o utf8.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7Pu2oU/R.INSTALL2a66de52650012/base64enc/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-base64enc/00new/base64enc/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (base64enc) * installing *source* package ‘permute’ ... ** this is package ‘permute’ version ‘0.9-7’ ** package ‘permute’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (permute) begin installing package ‘pinfsc50’ begin installing package ‘evaluate’ * installing *source* package ‘withr’ ... ** this is package ‘withr’ version ‘3.0.2’ ** package ‘withr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (withr) begin installing package ‘xfun’ * installing *source* package ‘utf8’ ... ** this is package ‘utf8’ version ‘1.2.4’ ** package ‘utf8’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFeu3FU/R.INSTALL2a635ccd5a21b/utf8/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c as_utf8.c -o as_utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c bytes.c -o bytes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c context.c -o context.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c render.c -o render.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c render_table.c -o render_table.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c string.c -o string.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c text.c -o text.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_encode.c -o utf8_encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_format.c -o utf8_format.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_normalize.c -o utf8_normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_valid.c -o utf8_valid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_width.c -o utf8_width.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c util.c -o util.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/array.c -o utf8lite/src/array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/char.c -o utf8lite/src/char.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/encode.c -o utf8lite/src/encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/error.c -o utf8lite/src/error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/escape.c -o utf8lite/src/escape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/graph.c -o utf8lite/src/graph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/render.c -o utf8lite/src/render.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/text.c -o utf8lite/src/text.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFeu3FU/R.INSTALL2a635ccd5a21b/utf8/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-utf8/00new/utf8/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (utf8) begin installing package ‘brio’ * installing *source* package ‘lazyeval’ ... ** this is package ‘lazyeval’ version ‘0.2.2’ ** package ‘lazyeval’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpsg5QG0/R.INSTALL2a673276cae8ad/lazyeval/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c expr.c -o expr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c interp.c -o interp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lazy.c -o lazy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c name.c -o name.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpsg5QG0/R.INSTALL2a673276cae8ad/lazyeval/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-lazyeval/00new/lazyeval/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lazyeval) begin installing package ‘praise’ * installing *source* package ‘nnls’ ... ** this is package ‘nnls’ version ‘1.6’ ** package ‘nnls’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDTVOHd/R.INSTALL2a68c4470de1a5/nnls/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o flang-new-19 -fpic -g -O2 -c lawson_hanson_nnls.f -o lawson_hanson_nnls.o flang-new-19 -fpic -g -O2 -c nnnpls.f -o nnnpls.o ./nnnpls.f:159:10: warning: Reference to the procedure 'h12' has an implicit interface that is distinct from another reference: incompatible dummy argument #8: incompatible dummy data object shapes CALL H12 (2,NPP1,NPP1+1,M,A(1,J),1,UP,ZZ,1,1,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./nnnpls.f:143:7: previous reference to 'h12' CALL H12 (1,NPP1,NPP1+1,M,A(1,J),1,UP,DUMMY,1,1,0) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./nnnpls.f:194:13: warning: Reference to the procedure 'h12' has an implicit interface that is distinct from another reference: incompatible dummy argument #8: incompatible dummy data object shapes CALL H12 (2,NSETP,NPP1,M,A(1,J),1,UP,A(1,JJ),1,MDA,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./nnnpls.f:143:7: previous reference to 'h12' CALL H12 (1,NPP1,NPP1+1,M,A(1,J),1,UP,DUMMY,1,1,0) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o nnls.so init.o lawson_hanson_nnls.o nnnpls.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDTVOHd/R.INSTALL2a68c4470de1a5/nnls/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-nnls/00new/nnls/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nnls) begin installing package ‘ps’ * installing *source* package ‘polynom’ ... ** this is package ‘polynom’ version ‘1.4-1’ ** package ‘polynom’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (polynom) begin installing package ‘stringi’ * installing *source* package ‘ellipse’ ... ** this is package ‘ellipse’ version ‘0.5.0’ ** package ‘ellipse’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ellipse) begin installing package ‘Rcpp’ * installing *source* package ‘generics’ ... ** this is package ‘generics’ version ‘0.1.3’ ** package ‘generics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (generics) begin installing package ‘RColorBrewer’ * installing *source* package ‘R6’ ... ** this is package ‘R6’ version ‘2.6.1’ ** package ‘R6’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (R6) begin installing package ‘ordinal’ * installing *source* package ‘cpp11’ ... ** this is package ‘cpp11’ version ‘0.5.2’ ** package ‘cpp11’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp11) begin installing package ‘askpass’ * installing *source* package ‘pinfsc50’ ... ** this is package ‘pinfsc50’ version ‘1.3.0’ ** package ‘pinfsc50’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pinfsc50) begin installing package ‘checkmate’ * installing *source* package ‘rebus.base’ ... ** this is package ‘rebus.base’ version ‘0.0-3’ ** package ‘rebus.base’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rebus.base) begin installing package ‘gdata’ * installing *source* package ‘praise’ ... ** this is package ‘praise’ version ‘1.0.0’ ** package ‘praise’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (praise) begin installing package ‘diffobj’ * installing *source* package ‘evaluate’ ... ** this is package ‘evaluate’ version ‘1.0.3’ ** package ‘evaluate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (evaluate) begin installing package ‘e1071’ * installing *source* package ‘brio’ ... ** this is package ‘brio’ version ‘1.1.5’ ** package ‘brio’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppTvNvB/R.INSTALL2a6e103d1e0a16/brio/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c brio.c -o brio.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c file_line_endings.c -o file_line_endings.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_file.c -o read_file.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_file_raw.c -o read_file_raw.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_lines.c -o read_lines.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write_file.c -o write_file.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write_file_raw.c -o write_file_raw.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write_lines.c -o write_lines.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_file_raw.o write_lines.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppTvNvB/R.INSTALL2a6e103d1e0a16/brio/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-brio/00new/brio/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (brio) begin installing package ‘foreach’ * installing *source* package ‘jsonlite’ ... ** this is package ‘jsonlite’ version ‘2.0.0’ ** package ‘jsonlite’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpylt6zT/R.INSTALL2a6634776b2424/jsonlite/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_array.c -o collapse_array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_object.c -o collapse_object.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_pretty.c -o collapse_pretty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c escape_chars.c -o escape_chars.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c integer64_to_na.c -o integer64_to_na.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_datelist.c -o is_datelist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_recordlist.c -o is_recordlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_scalarlist.c -o is_scalarlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c modp_numtoa.c -o modp_numtoa.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c null_to_na.c -o null_to_na.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c num_to_char.c -o num_to_char.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c parse.c -o parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c prettify.c -o prettify.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c push_parser.c -o push_parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c r-base64.c -o r-base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c register.c -o register.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c row_collapse.c -o row_collapse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c transpose_list.c -o transpose_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c validate.c -o validate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl.c -o yajl/yajl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_buf.c -o yajl/yajl_buf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_encode.c -o yajl/yajl_encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_gen.c -o yajl/yajl_gen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_lex.c -o yajl/yajl_lex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_parser.c -o yajl/yajl_parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_tree.c -o yajl/yajl_tree.o ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpylt6zT/R.INSTALL2a6634776b2424/jsonlite/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-jsonlite/00new/jsonlite/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘asJSON’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘asJSON’ with signature ‘"ITime"’: no definition for class “ITime” in method for ‘asJSON’ with signature ‘"hms"’: no definition for class “hms” in method for ‘asJSON’ with signature ‘"json"’: no definition for class “json” in method for ‘asJSON’ with signature ‘"integer64"’: no definition for class “integer64” in method for ‘asJSON’ with signature ‘"pairlist"’: no definition for class “pairlist” in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” in method for ‘asJSON’ with signature ‘"scalar"’: no definition for class “scalar” in method for ‘asJSON’ with signature ‘"sf"’: no definition for class “sf” in method for ‘asJSON’ with signature ‘"sfc"’: no definition for class “sfc” in method for ‘asJSON’ with signature ‘"vctrs_vctr"’: no definition for class “vctrs_vctr” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jsonlite) begin installing package ‘rebus.datetimes’ * installing *source* package ‘askpass’ ... ** this is package ‘askpass’ version ‘1.2.1’ ** package ‘askpass’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCSbpBY/R.INSTALL2a7296654b2503/askpass/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c askpass.c -o askpass.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o askpass.so askpass.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCSbpBY/R.INSTALL2a7296654b2503/askpass/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-askpass/00new/askpass/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (askpass) begin installing package ‘rebus.numbers’ * installing *source* package ‘isoband’ ... ** this is package ‘isoband’ version ‘0.2.7’ ** package ‘isoband’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXYHrua/R.INSTALL2a653c3955b85a/isoband/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c clip-lines.cpp -o clip-lines.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c init.cpp -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c isoband.cpp -o isoband.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c polygon.cpp -o polygon.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c separate-polygons.cpp -o separate-polygons.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c test-clip-lines.cpp -o test-clip-lines.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c test-runner.cpp -o test-runner.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c test-separate-polygons.cpp -o test-separate-polygons.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o isoband.so clip-lines.o init.o isoband.o polygon.o separate-polygons.o test-clip-lines.o test-runner.o test-separate-polygons.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXYHrua/R.INSTALL2a653c3955b85a/isoband/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-isoband/00new/isoband/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (isoband) begin installing package ‘rebus.unicode’ * installing *source* package ‘MatrixModels’ ... ** this is package ‘MatrixModels’ version ‘0.5-4’ ** package ‘MatrixModels’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MatrixModels) begin installing package ‘vegan’ * installing *source* package ‘RColorBrewer’ ... ** this is package ‘RColorBrewer’ version ‘1.1-3’ ** package ‘RColorBrewer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RColorBrewer) begin installing package ‘openssl’ * installing *source* package ‘SparseM’ ... ** this is package ‘SparseM’ version ‘1.84-2’ ** package ‘SparseM’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4VSXvL/R.INSTALL2a597371e4923f/SparseM/src' flang-new-19 -fpic -g -O2 -c bckslv.f -o bckslv.o flang-new-19 -fpic -g -O2 -c chol.f -o chol.o flang-new-19 -fpic -g -O2 -c chol2csr.f -o chol2csr.o flang-new-19 -fpic -g -O2 -c cholesky.f -o cholesky.o ./cholesky.f:65:7: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:724:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:815:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:903:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:929:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:2561:7: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:3746:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:3934:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:4221:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:4754:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ flang-new-19 -fpic -g -O2 -c csr.f -o csr.o flang-new-19 -fpic -g -O2 -c extract.f -o extract.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o flang-new-19 -fpic -g -O2 -c sparskit.f -o sparskit.o flang-new-19 -fpic -g -O2 -c subscr.f -o subscr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o SparseM.so bckslv.o chol.o chol2csr.o cholesky.o csr.o extract.o init.o sparskit.o subscr.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4VSXvL/R.INSTALL2a597371e4923f/SparseM/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-SparseM/00new/SparseM/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘diag’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘diag<-’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘norm’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘backsolve’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘forwardsolve’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘model.response’ from package ‘stats’ in package ‘SparseM’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SparseM) begin installing package ‘tzdb’ * installing *source* package ‘bit’ ... ** this is package ‘bit’ version ‘4.6.0’ ** package ‘bit’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJDOkBB/R.INSTALL2a594615e7a5e4/bit/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c attrutil.c -o attrutil.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bit.c -o bit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c chunkutil.c -o chunkutil.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c clone.c -o clone.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integerutil.c -o integerutil.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c merge.c -o merge.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rle.c -o rle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sort.c -o sort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o bit.so attrutil.o bit.o chunkutil.o clone.o init.o integerutil.o merge.o rle.o sort.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJDOkBB/R.INSTALL2a594615e7a5e4/bit/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-bit/00new/bit/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit) begin installing package ‘quantreg’ * installing *source* package ‘foreach’ ... ** this is package ‘foreach’ version ‘1.5.2’ ** package ‘foreach’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (foreach) begin installing package ‘bit64’ * installing *source* package ‘rebus.datetimes’ ... ** this is package ‘rebus.datetimes’ version ‘0.0-2’ ** package ‘rebus.datetimes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rebus.datetimes) begin installing package ‘doParallel’ * installing *source* package ‘rebus.numbers’ ... ** this is package ‘rebus.numbers’ version ‘0.0-1’ ** package ‘rebus.numbers’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rebus.numbers) * installing *source* package ‘gdata’ ... ** this is package ‘gdata’ version ‘3.0.1’ ** package ‘gdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gdata) * installing *source* package ‘rbibutils’ ... ** this is package ‘rbibutils’ version ‘2.3’ ** package ‘rbibutils’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZ9xW8u/R.INSTALL2a59585451ac63/rbibutils/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c adsout.c -o adsout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any2xml.c -o any2xml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c args.c -o args.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bib2be.c -o bib2be.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibcore.c -o bibcore.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibentrydirectout.c -o bibentrydirectout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibentryout.c -o bibentryout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibl.c -o bibl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c biblatexin.c -o biblatexin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c biblatexout.c -o biblatexout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibprog.c -o bibprog.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibtexdirectin.c -o bibtexdirectin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibtexin.c -o bibtexin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibtexout.c -o bibtexout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibtextypes.c -o bibtextypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibutils.c -o bibutils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bltypes.c -o bltypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bu_auth.c -o bu_auth.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c charsets.c -o charsets.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_be_bed.c -o common_be_bed.o common_be_bed.c:48:17: warning: variable 'nch' set but not used [-Wunused-but-set-variable] 48 | int nseps = 0, nch; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_bt_blt_btd_out.c -o common_bt_blt_btd_out.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_bt_btd.c -o common_bt_btd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_bt_btd_blt.c -o common_bt_btd_blt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_bt_btd_out.c -o common_bt_btd_out.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c copacin.c -o copacin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c copactypes.c -o copactypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ebiin.c -o ebiin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c endin.c -o endin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c endout.c -o endout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c endtypes.c -o endtypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c endxmlin.c -o endxmlin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c entities.c -o entities.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c fields.c -o fields.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c gb18030.c -o gb18030.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c generic.c -o generic.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c intlist.c -o intlist.o intlist.c:27:1: warning: unused function 'intlist_validn' [-Wunused-function] 27 | intlist_validn( intlist *il, int n ) | ^~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c is_ws.c -o is_ws.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c isiin.c -o isiin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c isiout.c -o isiout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c isitypes.c -o isitypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c iso639_1.c -o iso639_1.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c iso639_2.c -o iso639_2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c iso639_3.c -o iso639_3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c latex.c -o latex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c latex_parse.c -o latex_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c marc_auth.c -o marc_auth.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c medin.c -o medin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c modsin.c -o modsin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c modsout.c -o modsout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c modstypes.c -o modstypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c name.c -o name.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nbibin.c -o nbibin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nbibout.c -o nbibout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nbibtypes.c -o nbibtypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c notes.c -o notes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pages.c -o pages.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reftypes.c -o reftypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c risin.c -o risin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c risout.c -o risout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ristypes.c -o ristypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c serialno.c -o serialno.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c slist.c -o slist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c str.c -o str.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c str_conv.c -o str_conv.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c strsearch.c -o strsearch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c title.c -o title.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tomods.c -o tomods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c type.c -o type.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unicode.c -o unicode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c url.c -o url.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vplist.c -o vplist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wordin.c -o wordin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wordout.c -o wordout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xml.c -o xml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xml2any.c -o xml2any.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xml_encoding.c -o xml_encoding.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rbibutils.so adsout.o any2xml.o args.o bib2be.o bibcore.o bibentrydirectout.o bibentryout.o bibl.o biblatexin.o biblatexout.o bibprog.o bibtexdirectin.o bibtexin.o bibtexout.o bibtextypes.o bibutils.o bltypes.o bu_auth.o charsets.o common_be_bed.o common_bt_blt_btd_out.o common_bt_btd.o common_bt_btd_blt.o common_bt_btd_out.o copacin.o copactypes.o ebiin.o endin.o endout.o endtypes.o endxmlin.o entities.o fields.o gb18030.o generic.o init.o intlist.o is_ws.o isiin.o isiout.o isitypes.o iso639_1.o iso639_2.o iso639_3.o latex.o latex_parse.o marc_auth.o medin.o modsin.o modsout.o modstypes.o name.o nbibin.o nbibout.o nbibtypes.o notes.o pages.o reftypes.o risin.o risout.o ristypes.o serialno.o slist.o str.o str_conv.o strsearch.o title.o tomods.o type.o unicode.o url.o utf8.o vplist.o wordin.o wordout.o xml.o xml2any.o xml_encoding.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZ9xW8u/R.INSTALL2a59585451ac63/rbibutils/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rbibutils/00new/rbibutils/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rbibutils) begin installing package ‘Rdpack’ * installing *source* package ‘memuse’ ... ** this is package ‘memuse’ version ‘4.2-3’ ** package ‘memuse’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 option to enable C11 features... -std=gnu11 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for features.h... yes configure: creating ./config.status config.status: creating src/meminfo/src/conf.h ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptwPgjo/R.INSTALL2a6a9141f8ee0d/memuse/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/RNACI -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c meminfo/src/cacheinfo.c -o meminfo/src/cacheinfo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/RNACI -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c meminfo/src/fileinfo.c -o meminfo/src/fileinfo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/RNACI -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c meminfo/src/platform.c -o meminfo/src/platform.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/RNACI -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c meminfo/src/procinfo.c -o meminfo/src/procinfo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/RNACI -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c meminfo/src/raminfo.c -o meminfo/src/raminfo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/RNACI -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c meminfo/src/swapinfo.c -o meminfo/src/swapinfo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/RNACI -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wrappers.c -o wrappers.o wrappers.c:116:7: warning: variable 'ct' set but not used [-Wunused-but-set-variable] 116 | int ct = 0; | ^ wrappers.c:132:7: warning: variable 'ct' set but not used [-Wunused-but-set-variable] 132 | int ct = 0; | ^ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/RNACI -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c memuse_native.c -o memuse_native.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o memuse.so meminfo/src/cacheinfo.o meminfo/src/fileinfo.o meminfo/src/platform.o meminfo/src/procinfo.o meminfo/src/raminfo.o meminfo/src/swapinfo.o wrappers.o memuse_native.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptwPgjo/R.INSTALL2a6a9141f8ee0d/memuse/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-memuse/00new/memuse/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (memuse) * installing *source* package ‘rebus.unicode’ ... ** this is package ‘rebus.unicode’ version ‘0.0-2’ ** package ‘rebus.unicode’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rebus.unicode) begin installing package ‘rebus’ * installing *source* package ‘xfun’ ... ** this is package ‘xfun’ version ‘0.52’ ** package ‘xfun’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVxk6cW/R.INSTALL2a6d045d8609bc/xfun/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rand_lcg.c -o rand_lcg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o xfun.so base64.o init.o rand_lcg.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVxk6cW/R.INSTALL2a6d045d8609bc/xfun/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-xfun/00new/xfun/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xfun) begin installing package ‘highr’ begin installing package ‘tinytex’ * installing *source* package ‘doParallel’ ... ** this is package ‘doParallel’ version ‘1.0.17’ ** package ‘doParallel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (doParallel) * installing *source* package ‘ps’ ... ** this is package ‘ps’ version ‘1.9.1’ ** package ‘ps’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpyzct2w/R.INSTALL2a6ec425a5c378/ps/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -g -O3 -Wall -pedantic -Wl,-O1 -Wall px.c -o px clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api-common.c -o api-common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common.c -o common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c extra.c -o extra.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dummy.c -o dummy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c error-codes.c -o error-codes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c posix.c -o posix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api-posix.c -o api-posix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c linux.c -o linux.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api-linux.c -o api-linux.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o cleancall.o posix.o api-posix.o linux.o api-linux.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpyzct2w/R.INSTALL2a6ec425a5c378/ps/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ps/00new/ps ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ps) begin installing package ‘processx’ * installing *source* package ‘rebus’ ... ** this is package ‘rebus’ version ‘0.1-3’ ** package ‘rebus’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rebus) * installing *source* package ‘highr’ ... ** this is package ‘highr’ version ‘0.11’ ** package ‘highr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (highr) * installing *source* package ‘digest’ ... ** this is package ‘digest’ version ‘0.6.37’ ** package ‘digest’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpO5jS3g/R.INSTALL2a66c432f51f19/digest/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c SpookyV2.cpp -o SpookyV2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aes.c -o aes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3.c -o blake3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3_dispatch.c -o blake3_dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3_portable.c -o blake3_portable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c crc32.c -o crc32.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c crc32c.cpp -o crc32c.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c crc32c_portable.cpp -o crc32c_portable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c digest.c -o digest.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c digest2int.c -o digest2int.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c md5.c -o md5.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pmurhash.c -o pmurhash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c raes.c -o raes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha1.c -o sha1.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha2.c -o sha2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha256.c -o sha256.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c spooky_serialize.cpp -o spooky_serialize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xxhash.c -o xxhash.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o crc32c.o crc32c_portable.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpO5jS3g/R.INSTALL2a66c432f51f19/digest/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-digest/00new/digest/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (digest) * installing *source* package ‘colorspace’ ... ** this is package ‘colorspace’ version ‘2.1-1’ ** package ‘colorspace’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpIVJXhx/R.INSTALL2a6825422b1189/colorspace/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colorspace.c -o colorspace.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o colorspace.so colorspace.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpIVJXhx/R.INSTALL2a6825422b1189/colorspace/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-colorspace/00new/colorspace/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (colorspace) * installing *source* package ‘checkmate’ ... ** this is package ‘checkmate’ version ‘2.3.2’ ** package ‘checkmate’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTQDkDB/R.INSTALL2a72a6c0491d5/checkmate/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c all_missing.c -o all_missing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_infinite.c -o any_infinite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_missing.c -o any_missing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_nan.c -o any_nan.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c checks.c -o checks.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c find_nchar.c -o find_nchar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c guess_type.c -o guess_type.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c helper.c -o helper.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integerish.c -o integerish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c is_sorted.c -o is_sorted.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c qassert.c -o qassert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c which_first.c -o which_first.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o checkmate.so all_missing.o any_infinite.o any_missing.o any_nan.o checks.o find_nchar.o guess_type.o helper.o init.o integerish.o is_sorted.o qassert.o which_first.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTQDkDB/R.INSTALL2a72a6c0491d5/checkmate/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-checkmate/00new/checkmate/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (checkmate) * installing *source* package ‘tinytex’ ... ** this is package ‘tinytex’ version ‘0.57’ ** package ‘tinytex’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinytex) * installing *source* package ‘e1071’ ... ** this is package ‘e1071’ version ‘1.7-16’ ** package ‘e1071’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQMOBON/R.INSTALL2a743e54cdfa23/e1071/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rsvm.c -o Rsvm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cmeans.c -o cmeans.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cshell.c -o cshell.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c floyd.c -o floyd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c svm.cpp -o svm.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o e1071.so Rsvm.o cmeans.o cshell.o floyd.o init.o svm.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQMOBON/R.INSTALL2a743e54cdfa23/e1071/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-e1071/00new/e1071/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (e1071) * installing *source* package ‘yaml’ ... ** this is package ‘yaml’ version ‘2.3.10’ ** package ‘yaml’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfHiAHo/R.INSTALL2a6a555aa1fb6d/yaml/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api.c -o api.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dumper.c -o dumper.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c emitter.c -o emitter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c implicit.c -o implicit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loader.c -o loader.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c parser.c -o parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_emit.c -o r_emit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_ext.c -o r_ext.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_parse.c -o r_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reader.c -o reader.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c scanner.c -o scanner.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c writer.c -o writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfHiAHo/R.INSTALL2a6a555aa1fb6d/yaml/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-yaml/00new/yaml/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (yaml) begin installing package ‘knitr’ * installing *source* package ‘openssl’ ... ** this is package ‘openssl’ version ‘2.3.2’ ** package ‘openssl’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS= Using PKG_LIBS=-l:libssl.so.3 -l:libcrypto.so.3 ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpoI4VRg/R.INSTALL2a784161a18817/openssl/src' rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aes.c -o aes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bignum.c -o bignum.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cert.c -o cert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compatibility.c -o compatibility.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diffie.c -o diffie.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c envelope.c -o envelope.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c error.c -o error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hash.c -o hash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c info.c -o info.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c keygen.c -o keygen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c keys.c -o keys.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c onload.c -o onload.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c openssh.c -o openssh.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c password.c -o password.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pbkdf.c -o pbkdf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pem.c -o pem.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pkcs12.c -o pkcs12.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pkcs7.c -o pkcs7.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rand.c -o rand.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rsa.c -o rsa.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c signing.c -o signing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ssl.c -o ssl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c stream.c -o stream.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write.c -o write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c x25519.c -o x25519.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bcrypt/blowfish.c -o bcrypt/blowfish.o ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.3 -l:libcrypto.so.3 -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpoI4VRg/R.INSTALL2a784161a18817/openssl/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-openssl/00new/openssl/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (openssl) begin installing package ‘httr’ * installing *source* package ‘Rdpack’ ... ** this is package ‘Rdpack’ version ‘2.6.4’ ** package ‘Rdpack’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rdpack) begin installing package ‘reformulas’ * installing *source* package ‘cli’ ... ** this is package ‘cli’ version ‘3.6.5’ ** package ‘cli’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCC5jBO/R.INSTALL2a64bc1d9beaf3/cli/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ansi.c -o ansi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c diff.c -o diff.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c errors.c -o errors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c glue.c -o glue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c inst.c -o inst.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c keypress-unix.c -o keypress-unix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c keypress-win.c -o keypress-win.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c keypress.c -o keypress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c md5.c -o md5.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c progress-altrep.c -o progress-altrep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c progress.c -o progress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c sha1.c -o sha1.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c sha256.c -o sha256.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c thread.c -o thread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c tty.c -o tty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vt.c -o vt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vtparse.c -o vtparse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vtparse_table.c -o vtparse_table.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c win-utf8.c -o win-utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c winfiles.c -o winfiles.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c xxhash.c -o xxhash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c xxhash2.c -o xxhash2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o cli.so ansi.o cleancall.o diff.o errors.o glue.o init.o inst.o keypress-unix.o keypress-win.o keypress.o md5.o progress-altrep.o progress.o sha1.o sha256.o thread.o tty.o utf8.o utils.o vt.o vtparse.o vtparse_table.o win-utf8.o winfiles.o xxhash.o xxhash2.o -lpthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCC5jBO/R.INSTALL2a64bc1d9beaf3/cli/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-cli/00new/cli/libs ** R ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cli) begin installing package ‘desc’ * installing *source* package ‘plotrix’ ... ** this is package ‘plotrix’ version ‘3.8-4’ ** package ‘plotrix’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plotrix) * installing *source* package ‘processx’ ... ** this is package ‘processx’ version ‘3.8.6’ ** package ‘processx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpIGARqC/R.INSTALL2a86326b1c26a0/processx/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -g -O3 -Wall -pedantic -Wl,-O1 -Wall tools/px.c -o tools/px clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -g -O3 -Wall -pedantic -Wl,-O1 -I../inst/include -Wall tools/sock.c -o tools/sock clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -g -O3 -Wall -pedantic -Wl,-O1 supervisor/supervisor.c \ supervisor/utils.c -o supervisor/supervisor clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c client.c -o client.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c errors.c -o errors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L"/home/hornik/tmp/R-d-clang-xtra/lib" -Wl,-O1 -o client.so base64.o client.o errors.o \ -L"/home/hornik/tmp/R-d-clang-xtra/lib" -lR clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c poll.c -o poll.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c processx-connection.c -o processx-connection.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c processx-vector.c -o processx-vector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c create-time.c -o create-time.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/childlist.c -o unix/childlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/connection.c -o unix/connection.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/processx.c -o unix/processx.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/sigchld.c -o unix/sigchld.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/utils.c -o unix/utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/named_pipe.c -o unix/named_pipe.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpIGARqC/R.INSTALL2a86326b1c26a0/processx/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-processx/00new/processx ** R ** inst ** byte-compile and prepare package for lazy loading R6Class process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (processx) begin installing package ‘callr’ * installing *source* package ‘tzdb’ ... ** this is package ‘tzdb’ version ‘0.5.0’ ** package ‘tzdb’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpunvmlu/R.INSTALL2a7a346742bca2/tzdb/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c api.cpp -o api.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c names.cpp -o names.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c path.cpp -o path.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c tz.cpp -o tz.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c version.cpp -o version.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tzdb.so api.o cpp11.o names.o path.o tz.o version.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpunvmlu/R.INSTALL2a7a346742bca2/tzdb/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tzdb/00new/tzdb/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tzdb) * installing *source* package ‘rlang’ ... ** this is package ‘rlang’ version ‘1.1.6’ ** package ‘rlang’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVEG2xf/R.INSTALL2a656c4d0bb45a/rlang/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c capture.c -o capture.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c internal.c -o internal.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang.c -o rlang.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rlang.so capture.o internal.o rlang.o version.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVEG2xf/R.INSTALL2a656c4d0bb45a/rlang/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rlang/00new/rlang/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlang) begin installing package ‘cachem’ begin installing package ‘lifecycle’ begin installing package ‘htmltools’ * installing *source* package ‘bit64’ ... ** this is package ‘bit64’ version ‘4.6.0-1’ ** package ‘bit64’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpca3cjw/R.INSTALL2a8100761314ca/bit64/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsearch.c -o bsearch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cache.c -o cache.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hash64.c -o hash64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integer64.c -o integer64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sort64.c -o sort64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sortuse64.c -o sortuse64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o bit64.so bsearch.o cache.o hash64.o init.o integer64.o sort64.o sortuse64.o -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpca3cjw/R.INSTALL2a8100761314ca/bit64/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-bit64/00new/bit64/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit64) * installing *source* package ‘diffobj’ ... ** this is package ‘diffobj’ version ‘0.3.6’ ** package ‘diffobj’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBOEjYr/R.INSTALL2a73733aba9775/diffobj/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diff.c -o diff.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diffobj.c -o diffobj.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o diffobj.so diff.o diffobj.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBOEjYr/R.INSTALL2a73733aba9775/diffobj/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-diffobj/00new/diffobj/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (diffobj) begin installing package ‘waldo’ * installing *source* package ‘desc’ ... ** this is package ‘desc’ version ‘1.4.3’ ** package ‘desc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (desc) * installing *source* package ‘ordinal’ ... ** this is package ‘ordinal’ version ‘2023.12-4.1’ ** package ‘ordinal’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCDZhV1/R.INSTALL2a722a541b95f1/ordinal/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c get_fitted.c -o get_fitted.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c links.c -o links.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utilityFuns.c -o utilityFuns.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ordinal.so get_fitted.o init.o links.o utilityFuns.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCDZhV1/R.INSTALL2a722a541b95f1/ordinal/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ordinal/00new/ordinal/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ordinal) * installing *source* package ‘reformulas’ ... ** this is package ‘reformulas’ version ‘0.4.0’ ** package ‘reformulas’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reformulas) * installing *source* package ‘httr’ ... ** this is package ‘httr’ version ‘1.4.7’ ** package ‘httr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (httr) * installing *source* package ‘cachem’ ... ** this is package ‘cachem’ version ‘1.1.0’ ** package ‘cachem’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpgVVubR/R.INSTALL2a8f3c4bbbeeeb/cachem/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cache.c -o cache.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o cachem.so cache.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpgVVubR/R.INSTALL2a8f3c4bbbeeeb/cachem/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-cachem/00new/cachem/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cachem) begin installing package ‘memoise’ * installing *source* package ‘lifecycle’ ... ** this is package ‘lifecycle’ version ‘1.0.4’ ** package ‘lifecycle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lifecycle) begin installing package ‘gtable’ begin installing package ‘vctrs’ * installing *source* package ‘fs’ ... ** this is package ‘fs’ version ‘1.6.6’ ** package ‘fs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJKb1YX/R.INSTALL2a644e3ba10dec/fs/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c dir.cc -o dir.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c error.cc -o error.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c file.cc -o file.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c fs.cc -o fs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c getmode.cc -o getmode.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c id.cc -o id.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c init.cc -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c link.cc -o link.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c path.cc -o path.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c utils.cc -o utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c unix/getmode.cc -o unix/getmode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/setmode.c -o bsd/setmode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/strmode.c -o bsd/strmode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/reallocarray.c -o bsd/reallocarray.o touch libuv-1.44.2/aclocal.m4 && touch libuv-1.44.2/configure && touch libuv-1.44.2/Makefile.in (cd libuv-1.44.2 \ && CC="clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23" CPPFLAGS="-I/usr/local/include" CFLAGS="-g -O3 -Wall -pedantic -fpic -fvisibility=hidden -std=c99" AR="ar" RANLIB="ranlib" LDFLAGS="-Wl,-O1" ./configure --quiet) make --directory=libuv-1.44.2 \ HAVE_DTRACE=0 make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpJKb1YX/R.INSTALL2a644e3ba10dec/fs/src/libuv-1.44.2' CC src/libuv_la-fs-poll.lo CC src/libuv_la-idna.lo CC src/libuv_la-inet.lo CC src/libuv_la-random.lo CC src/libuv_la-strscpy.lo CC src/libuv_la-threadpool.lo CC src/libuv_la-timer.lo CC src/libuv_la-uv-data-getter-setters.lo CC src/libuv_la-uv-common.lo CC src/libuv_la-version.lo CC src/libuv_la-strtok.lo CC src/unix/libuv_la-async.lo CC src/unix/libuv_la-core.lo CC src/unix/libuv_la-dl.lo CC src/unix/libuv_la-fs.lo CC src/unix/libuv_la-getaddrinfo.lo CC src/unix/libuv_la-getnameinfo.lo CC src/unix/libuv_la-loop-watcher.lo CC src/unix/libuv_la-loop.lo CC src/unix/libuv_la-pipe.lo CC src/unix/libuv_la-poll.lo CC src/unix/libuv_la-process.lo CC src/unix/libuv_la-random-devurandom.lo CC src/unix/libuv_la-signal.lo CC src/unix/libuv_la-stream.lo CC src/unix/libuv_la-tcp.lo CC src/unix/libuv_la-thread.lo CC src/unix/libuv_la-tty.lo CC src/unix/libuv_la-udp.lo CC src/unix/libuv_la-linux-core.lo CC src/unix/libuv_la-linux-inotify.lo CC src/unix/libuv_la-linux-syscalls.lo CC src/unix/libuv_la-procfs-exepath.lo CC src/unix/libuv_la-proctitle.lo CC src/unix/libuv_la-random-getrandom.lo CC src/unix/libuv_la-random-sysctl-linux.lo CC src/unix/libuv_la-epoll.lo CCLD libuv.la make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpJKb1YX/R.INSTALL2a644e3ba10dec/fs/src/libuv-1.44.2' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fs.so dir.o error.o file.o fs.o getmode.o id.o init.o link.o path.o utils.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.44.2/.libs/libuv.pa -pthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJKb1YX/R.INSTALL2a644e3ba10dec/fs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fs/00new/fs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fs) * installing *source* package ‘memoise’ ... ** this is package ‘memoise’ version ‘2.0.1’ ** package ‘memoise’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (memoise) * installing *source* package ‘waldo’ ... ** this is package ‘waldo’ version ‘0.6.1’ ** package ‘waldo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (waldo) * installing *source* package ‘knitr’ ... ** this is package ‘knitr’ version ‘1.50’ ** package ‘knitr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (knitr) * installing *source* package ‘htmltools’ ... ** this is package ‘htmltools’ version ‘0.5.8.1’ ** package ‘htmltools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpL0UeEk/R.INSTALL2a8f406ada8531/htmltools/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c template.c -o template.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o htmltools.so init.o template.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpL0UeEk/R.INSTALL2a8f406ada8531/htmltools/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-htmltools/00new/htmltools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmltools) begin installing package ‘sass’ begin installing package ‘crosstalk’ begin installing package ‘fontawesome’ begin installing package ‘jquerylib’ * installing *source* package ‘callr’ ... ** this is package ‘callr’ version ‘3.7.6’ ** package ‘callr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading R6Class r_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class r_session: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class rcmd_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class rscript_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (callr) begin installing package ‘pkgbuild’ * installing *source* package ‘gtable’ ... ** this is package ‘gtable’ version ‘0.3.6’ ** package ‘gtable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtable) begin installing package ‘gridExtra’ * installing *source* package ‘farver’ ... ** this is package ‘farver’ version ‘2.1.2’ ** package ‘farver’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDksV4T/R.INSTALL2a599524a9c239/farver/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c ColorSpace.cpp -o ColorSpace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Comparison.cpp -o Comparison.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Conversion.cpp -o Conversion.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c encode.cpp -o encode.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c farver.cpp -o farver.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c init.cpp -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o farver.so ColorSpace.o Comparison.o Conversion.o encode.o farver.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDksV4T/R.INSTALL2a599524a9c239/farver/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-farver/00new/farver/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (farver) begin installing package ‘scales’ * installing *source* package ‘quantreg’ ... ** this is package ‘quantreg’ version ‘6.1’ ** package ‘quantreg’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJ9Z2vy/R.INSTALL2a7cd4481100f2/quantreg/src' flang-new-19 -fpic -g -O2 -c akj.f -o akj.o flang-new-19 -fpic -g -O2 -c boot.f -o boot.o flang-new-19 -fpic -g -O2 -c bound.f -o bound.o flang-new-19 -fpic -g -O2 -c boundc.f -o boundc.o flang-new-19 -fpic -g -O2 -c brute.f -o brute.o flang-new-19 -fpic -g -O2 -c chlfct.f -o chlfct.o flang-new-19 -fpic -g -O2 -c cholesky.f -o cholesky.o ./cholesky.f:65:7: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:724:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:815:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:903:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:929:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:2561:7: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:3746:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:3934:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:4221:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:4754:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ flang-new-19 -fpic -g -O2 -c combos.f -o combos.o flang-new-19 -fpic -g -O2 -c crqf.f -o crqf.o flang-new-19 -fpic -g -O2 -c crqfnb.f -o crqfnb.o ./crqfnb.f:29:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(n,y,1,d,1) ^^^^^^^^^^^^^^^^^^^^^ ./crqfnb.f:28:7: previous reference to 'dcopy' call dcopy(p,wp,1,b(1,k-1),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./crqfnb.f:30:7: warning: Reference to the procedure 'dgemv' has an implicit interface that is distinct from another reference: incompatible dummy argument #7: incompatible dummy data object shapes call dgemv('N',n,p,one,x,n,b(1,k-1),1,one,d,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./crqfnb.f:23:7: previous reference to 'dgemv' call dgemv('T',n,p,one,x,n,d,1,zero,r,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c dsel05.f -o dsel05.o flang-new-19 -fpic -g -O2 -c extract.f -o extract.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c frand.c -o frand.o flang-new-19 -fpic -g -O2 -c grexp.f -o grexp.o flang-new-19 -fpic -g -O2 -c idmin.f -o idmin.o flang-new-19 -fpic -g -O2 -c iswap.f -o iswap.o flang-new-19 -fpic -g -O2 -c kuantile.f -o kuantile.o flang-new-19 -fpic -g -O2 -c kuantiles.f -o kuantiles.o flang-new-19 -fpic -g -O2 -c linpack.f -o linpack.o ./linpack.f:230:13: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:263:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:272:13: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:280:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:294:13: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:299:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:308:13: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:318:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mcmb.c -o mcmb.o mcmb.c:175:16: warning: variable 'mm' set but not used [-Wunused-but-set-variable] 175 | unsigned int mm; | ^ mcmb.c:176:32: warning: variable 'large' set but not used [-Wunused-but-set-variable] 176 | double taustar, pwtsum, ans, large; | ^ 2 warnings generated. flang-new-19 -fpic -g -O2 -c penalty.f -o penalty.o flang-new-19 -fpic -g -O2 -c pfnb.f -o pfnb.o ./pfnb.f:76:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,glob,1,aa(1,k+1),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:57:7: previous reference to 'dcopy' call dcopy(p,a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:77:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,ghib,1,aa(1,k+2),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:57:7: previous reference to 'dcopy' call dcopy(p,a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:84:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,wp,1,b(1,iq),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:57:7: previous reference to 'dcopy' call dcopy(p,a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:85:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(n,y,1,r,1) ^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:57:7: previous reference to 'dcopy' call dcopy(p,a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:86:7: warning: Reference to the procedure 'dgemv' has an implicit interface that is distinct from another reference: incompatible dummy argument #7: incompatible dummy data object shapes call dgemv('T',p,n,one,a,p,b(1,iq),1,one,r,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:80:7: previous reference to 'dgemv' call dgemv('N',p,k+2,one-tau,aa,p,d,1,zero,rhs,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c powell.f -o powell.o ./powell.f:67:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call daxpy(p,step,d,1,xh,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:58:7: previous reference to 'daxpy' call daxpy(p,one,u(1,k),1,d,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:103:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,a(hin,1),n,v,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:65:7: previous reference to 'dcopy' call dcopy(p,x,1,xh,1) ^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:105:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,b(1,k),1,v,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:65:7: previous reference to 'dcopy' call dcopy(p,x,1,xh,1) ^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c profnb.f -o profnb.o flang-new-19 -fpic -g -O2 -c pwxy.f -o pwxy.o ./pwxy.f:50:7: warning: Reference to the procedure 'dphil' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dphil(p,zero,aa(1,k)) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:42:7: previous reference to 'dphil' call dphil(p,zero,glob) ^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:76:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call daxpy(k+2,one-tau,u,1,wn,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:51:7: previous reference to 'daxpy' call daxpy(p,w(i),a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:78:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,wp,1,b(1,ir),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:70:7: previous reference to 'dcopy' call dcopy(p,glob,1,aa(1,k+1),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:79:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes call dcopy(n,y,1,u,1) ^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:70:7: previous reference to 'dcopy' call dcopy(p,glob,1,aa(1,k+1),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:80:7: warning: Reference to the procedure 'dgemv' has an implicit interface that is distinct from another reference: incompatible dummy argument #7: incompatible dummy data object shapes call dgemv('T',p,n,one,a,p,b(1,ir),1,one,u,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:74:7: previous reference to 'dgemv' call dgemv('N',p,k+2,one-tau,aa,p,d,1,zero,rhs,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c qfnb.f -o qfnb.o flang-new-19 -fpic -g -O2 -c qselect.f -o qselect.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c quantreg_init.c -o quantreg_init.o flang-new-19 -fpic -g -O2 -c rls.f -o rls.o ./rls.f:14:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call daxpy(p,r,ax,1,b(1,i),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./rls.f:13:7: previous reference to 'daxpy' call daxpy(p,one,b(1,i-1),1,b(1,i),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c rq0.f -o rq0.o flang-new-19 -fpic -g -O2 -c rq1.f -o rq1.o flang-new-19 -fpic -g -O2 -c rqbr.f -o rqbr.o flang-new-19 -fpic -g -O2 -c rqfn.f -o rqfn.o ./rqfn.f:48:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(n,c,1,s,1) ^^^^^^^^^^^^^^^^^^^^^ ./rqfn.f:47:7: previous reference to 'dcopy' call dcopy(pp,ada,1,aa,1) ^^^^^^^^^^^^^^^^^^^^^^^^^ ./rqfn.f:76:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,dy,1,rhs,1) ^^^^^^^^^^^^^^^^^^^^^^^^ ./rqfn.f:47:7: previous reference to 'dcopy' call dcopy(pp,ada,1,aa,1) ^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c rqfnb.f -o rqfnb.o flang-new-19 -fpic -g -O2 -c rqfnc.f -o rqfnc.o flang-new-19 -fpic -g -O2 -c rqs.f -o rqs.o flang-new-19 -fpic -g -O2 -c sakj.f -o sakj.o flang-new-19 -fpic -g -O2 -c sparskit2.f -o sparskit2.o flang-new-19 -fpic -g -O2 -c srqfn.f -o srqfn.o flang-new-19 -fpic -g -O2 -c srqfnc.f -o srqfnc.o flang-new-19 -fpic -g -O2 -c srtpai.f -o srtpai.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o quantreg.so akj.o boot.o bound.o boundc.o brute.o chlfct.o cholesky.o combos.o crqf.o crqfnb.o dsel05.o extract.o frand.o grexp.o idmin.o iswap.o kuantile.o kuantiles.o linpack.o mcmb.o penalty.o pfnb.o powell.o profnb.o pwxy.o qfnb.o qselect.o quantreg_init.o rls.o rq0.o rq1.o rqbr.o rqfn.o rqfnb.o rqfnc.o rqs.o sakj.o sparskit2.o srqfn.o srqfnc.o srtpai.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJ9Z2vy/R.INSTALL2a7cd4481100f2/quantreg/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-quantreg/00new/quantreg/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (quantreg) * installing *source* package ‘jquerylib’ ... ** this is package ‘jquerylib’ version ‘0.1.4’ ** package ‘jquerylib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jquerylib) * installing *source* package ‘Rcpp’ ... ** this is package ‘Rcpp’ version ‘1.0.14’ ** package ‘Rcpp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkyPOhL/R.INSTALL2a702e46b5725a/Rcpp/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c api.cpp -o api.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c attributes.cpp -o attributes.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c barrier.cpp -o barrier.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c date.cpp -o date.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c module.cpp -o module.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rcpp_init.cpp -o rcpp_init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkyPOhL/R.INSTALL2a702e46b5725a/Rcpp/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rcpp/00new/Rcpp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rcpp) begin installing package ‘minqa’ begin installing package ‘RcppEigen’ begin installing package ‘later’ begin installing package ‘wordcloud’ begin installing package ‘plyr’ begin installing package ‘princurve’ begin installing package ‘ape’ * installing *source* package ‘fontawesome’ ... ** this is package ‘fontawesome’ version ‘0.5.3’ ** package ‘fontawesome’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fontawesome) * installing *source* package ‘gridExtra’ ... ** this is package ‘gridExtra’ version ‘2.3’ ** package ‘gridExtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gridExtra) * installing *source* package ‘crosstalk’ ... ** this is package ‘crosstalk’ version ‘1.2.1’ ** package ‘crosstalk’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crosstalk) * installing *source* package ‘pkgbuild’ ... ** this is package ‘pkgbuild’ version ‘1.4.7’ ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgbuild) begin installing package ‘pkgload’ * installing *source* package ‘data.table’ ... ** this is package ‘data.table’ version ‘1.17.0’ ** package ‘data.table’ successfully unpacked and MD5 sums checked ** using staged installation zlib 1.3.1 is available ok * checking if R installation supports OpenMP without any extra hints... yes ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHsTOXr/R.INSTALL2a67b26517d80/data.table/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c assign.c -o assign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c between.c -o between.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c bmerge.c -o bmerge.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c chmatch.c -o chmatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c cj.c -o cj.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c coalesce.c -o coalesce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c dogroups.c -o dogroups.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fastmean.c -o fastmean.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fcast.c -o fcast.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fifelse.c -o fifelse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fmelt.c -o fmelt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c forder.c -o forder.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frank.c -o frank.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fread.c -o fread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c freadR.c -o freadR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c froll.c -o froll.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frollR.c -o frollR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frolladaptive.c -o frolladaptive.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fsort.c -o fsort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fwrite.c -o fwrite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fwriteR.c -o fwriteR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c gsumm.c -o gsumm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c idatetime.c -o idatetime.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c ijoin.c -o ijoin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c inrange.c -o inrange.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c nafill.c -o nafill.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c negate.c -o negate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c nqrecreateindices.c -o nqrecreateindices.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c openmp-utils.c -o openmp-utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c programming.c -o programming.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c quickselect.c -o quickselect.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c rbindlist.c -o rbindlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c reorder.c -o reorder.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c shift.c -o shift.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c snprintf.c -o snprintf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c subset.c -o subset.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c transpose.c -o transpose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c types.c -o types.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c uniqlist.c -o uniqlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c vecseq.c -o vecseq.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c wrappers.c -o wrappers.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o fsort.o fwrite.o fwriteR.o gsumm.o idatetime.o ijoin.o init.o inrange.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR PKG_CFLAGS = -fopenmp PKG_LIBS = -fopenmp -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHsTOXr/R.INSTALL2a67b26517d80/data.table/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-data.table/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) * installing *source* package ‘wordcloud’ ... ** this is package ‘wordcloud’ version ‘2.6’ ** package ‘wordcloud’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpV1dS3U/R.INSTALL2a94c7516b03e1/wordcloud/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c layout.cpp -o layout.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o wordcloud.so RcppExports.o layout.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpV1dS3U/R.INSTALL2a94c7516b03e1/wordcloud/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-wordcloud/00new/wordcloud/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wordcloud) * installing *source* package ‘princurve’ ... ** this is package ‘princurve’ version ‘2.1.6’ ** package ‘princurve’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQlULFY/R.INSTALL2a94c5ced1d88/princurve/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c project_to_curve.cpp -o project_to_curve.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o princurve.so RcppExports.o project_to_curve.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQlULFY/R.INSTALL2a94c5ced1d88/princurve/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-princurve/00new/princurve/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (princurve) * installing *source* package ‘minqa’ ... ** this is package ‘minqa’ version ‘1.2.8’ ** package ‘minqa’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpIOFSmg/R.INSTALL2a94b776967420/minqa/src' flang-new-19 -fpic -g -O2 -c altmov.f -o altmov.o flang-new-19 -fpic -g -O2 -c bigden.f -o bigden.o flang-new-19 -fpic -g -O2 -c biglag.f -o biglag.o flang-new-19 -fpic -g -O2 -c bobyqa.f -o bobyqa.o flang-new-19 -fpic -g -O2 -c bobyqb.f -o bobyqb.o flang-new-19 -fpic -g -O2 -c lagmax.f -o lagmax.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c minqa.cpp -o minqa.o flang-new-19 -fpic -g -O2 -c newuoa.f -o newuoa.o flang-new-19 -fpic -g -O2 -c newuob.f -o newuob.o flang-new-19 -fpic -g -O2 -c prelim.f -o prelim.o flang-new-19 -fpic -g -O2 -c rescue.f -o rescue.o flang-new-19 -fpic -g -O2 -c trsapp.f -o trsapp.o flang-new-19 -fpic -g -O2 -c trsbox.f -o trsbox.o flang-new-19 -fpic -g -O2 -c trstep.f -o trstep.o flang-new-19 -fpic -g -O2 -c uobyqa.f -o uobyqa.o flang-new-19 -fpic -g -O2 -c uobyqb.f -o uobyqb.o flang-new-19 -fpic -g -O2 -c update.f -o update.o flang-new-19 -fpic -g -O2 -c updatebobyqa.f -o updatebobyqa.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o minqa.so altmov.o bigden.o biglag.o bobyqa.o bobyqb.o lagmax.o minqa.o newuoa.o newuob.o prelim.o rescue.o trsapp.o trsbox.o trstep.o uobyqa.o uobyqb.o update.o updatebobyqa.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpIOFSmg/R.INSTALL2a94b776967420/minqa/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-minqa/00new/minqa/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (minqa) * installing *source* package ‘pkgload’ ... ** this is package ‘pkgload’ version ‘1.4.0’ ** package ‘pkgload’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgload) begin installing package ‘testthat’ * installing *source* package ‘plyr’ ... ** this is package ‘plyr’ version ‘1.8.9’ ** package ‘plyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpH3R5Pu/R.INSTALL2a94c15acb4d4c/plyr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loop_apply.c -o loop_apply.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c split-numeric.cpp -o split-numeric.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpH3R5Pu/R.INSTALL2a94c15acb4d4c/plyr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-plyr/00new/plyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plyr) * installing *source* package ‘scales’ ... ** this is package ‘scales’ version ‘1.4.0’ ** package ‘scales’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scales) * installing *source* package ‘later’ ... ** this is package ‘later’ version ‘1.4.2’ ** package ‘later’ successfully unpacked and MD5 sums checked ** using staged installation Running configure script -latomic linker flag not needed. Found UBSAN. Will skip tests that raise false positives. ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLb9wiu/R.INSTALL2a94bf4db87f1e/later/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c callback_registry.cpp -o callback_registry.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c debug.cpp -o debug.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c fd.cpp -o fd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c later.cpp -o later.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c later_posix.cpp -o later_posix.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c later_win32.cpp -o later_win32.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c timer_posix.cpp -o timer_posix.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c timestamp_unix.cpp -o timestamp_unix.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c timestamp_win32.cpp -o timestamp_win32.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tinycthread.c -o tinycthread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wref.c -o wref.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o later.so RcppExports.o callback_registry.o debug.o fd.o init.o later.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o tinycthread.o wref.o -pthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLb9wiu/R.INSTALL2a94bf4db87f1e/later/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-later/00new/later/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (later) begin installing package ‘promises’ * installing *source* package ‘vegan’ ... ** this is package ‘vegan’ version ‘2.6-10’ ** package ‘vegan’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuFwZbq/R.INSTALL2a77f511b92b31/vegan/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c data2hill.c -o data2hill.o flang-new-19 -fpic -g -O2 -c decorana.f -o decorana.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c getF.c -o getF.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c goffactor.c -o goffactor.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o flang-new-19 -fpic -g -O2 -c monoMDS.f -o monoMDS.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nestedness.c -o nestedness.o flang-new-19 -fpic -g -O2 -c ordering.f -o ordering.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pnpoly.c -o pnpoly.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c stepacross.c -o stepacross.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vegdist.c -o vegdist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o vegan.so data2hill.o decorana.o getF.o goffactor.o init.o monoMDS.o nestedness.o ordering.o pnpoly.o stepacross.o vegdist.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuFwZbq/R.INSTALL2a77f511b92b31/vegan/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-vegan/00new/vegan/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vegan) * installing *source* package ‘vctrs’ ... ** this is package ‘vctrs’ version ‘0.6.5’ ** package ‘vctrs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpdxonWD/R.INSTALL2a91f02fc934e0/vctrs/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep-lazy-character.c -o altrep-lazy-character.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep-rle.c -o altrep-rle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep.c -o altrep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c arg-counter.c -o arg-counter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c arg.c -o arg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c assert.c -o assert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c bind.c -o bind.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c c-unchop.c -o c-unchop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c c.c -o c.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c callables.c -o callables.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast-bare.c -o cast-bare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast-dispatch.c -o cast-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast.c -o cast.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c compare.c -o compare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c complete.c -o complete.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c conditions.c -o conditions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c dictionary.c -o dictionary.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c dim.c -o dim.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c empty.c -o empty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c equal.c -o equal.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c expand.c -o expand.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fields.c -o fields.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fill.c -o fill.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c globals.c -o globals.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c group.c -o group.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c growable.c -o growable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c hash.c -o hash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c interval.c -o interval.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c match-joint.c -o match-joint.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c match.c -o match.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c missing.c -o missing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c names.c -o names.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-collate.c -o order-collate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-groups.c -o order-groups.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-sortedness.c -o order-sortedness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-truelength.c -o order-truelength.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order.c -o order.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c poly-op.c -o poly-op.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c proxy-restore.c -o proxy-restore.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c proxy.c -o proxy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype-common.c -o ptype-common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype.c -o ptype.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype2-dispatch.c -o ptype2-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype2.c -o ptype2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rank.c -o rank.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rep.c -o rep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang-dev.c -o rlang-dev.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang.c -o rlang.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c runs.c -o runs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c set.c -o set.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c shape.c -o shape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c size-common.c -o size-common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c size.c -o size.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-array.c -o slice-array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-assign-array.c -o slice-assign-array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-assign.c -o slice-assign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-chop.c -o slice-chop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-interleave.c -o slice-interleave.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice.c -o slice.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c split.c -o split.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c subscript-loc.c -o subscript-loc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c subscript.c -o subscript.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c translate.c -o translate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-data-frame.c -o type-data-frame.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-date-time.c -o type-date-time.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-factor.c -o type-factor.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-info.c -o type-info.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-integer64.c -o type-integer64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-tibble.c -o type-tibble.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typeof2-s3.c -o typeof2-s3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typeof2.c -o typeof2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c unspecified.c -o unspecified.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils-dispatch.c -o utils-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vctrs-core.c -o vctrs-core.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o vctrs.so altrep-lazy-character.o altrep-rle.o altrep.o arg-counter.o arg.o assert.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o empty.o equal.o expand.o fields.o fill.o globals.o group.o growable.o hash.o init.o interval.o match-joint.o match.o missing.o names.o order-collate.o order-groups.o order-sortedness.o order-truelength.o order.o poly-op.o proxy-restore.o proxy.o ptype-common.o ptype.o ptype2-dispatch.o ptype2.o rank.o rep.o rlang-dev.o rlang.o runs.o set.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice-interleave.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-integer64.o type-tibble.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils.o vctrs-core.o version.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpdxonWD/R.INSTALL2a91f02fc934e0/vctrs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-vctrs/00new/vctrs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vctrs) begin installing package ‘hms’ begin installing package ‘purrr’ begin installing package ‘pillar’ begin installing package ‘tidyselect’ * installing *source* package ‘hms’ ... ** this is package ‘hms’ version ‘1.1.3’ ** package ‘hms’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hms) begin installing package ‘progress’ * installing *source* package ‘tidyselect’ ... ** this is package ‘tidyselect’ version ‘1.2.1’ ** package ‘tidyselect’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyselect) * installing *source* package ‘promises’ ... ** this is package ‘promises’ version ‘1.3.2’ ** package ‘promises’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuHzGND/R.INSTALL2a99337e5a87dd/promises/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c promise_task.cpp -o promise_task.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o promises.so RcppExports.o promise_task.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuHzGND/R.INSTALL2a99337e5a87dd/promises/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-promises/00new/promises/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (promises) * installing *source* package ‘progress’ ... ** this is package ‘progress’ version ‘1.2.3’ ** package ‘progress’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (progress) * installing *source* package ‘purrr’ ... ** this is package ‘purrr’ version ‘1.0.4’ ** package ‘purrr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCq8rJg/R.INSTALL2a99c063b205b4/purrr/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c backports.c -o backports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c coerce.c -o coerce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c conditions.c -o conditions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c flatten.c -o flatten.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c map.c -o map.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c pluck.c -o pluck.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c transpose.c -o transpose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o purrr.so backports.o cleancall.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCq8rJg/R.INSTALL2a99c063b205b4/purrr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-purrr/00new/purrr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (purrr) * installing *source* package ‘pillar’ ... ** this is package ‘pillar’ version ‘1.10.2’ ** package ‘pillar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pillar) begin installing package ‘tibble’ * installing *source* package ‘tibble’ ... ** this is package ‘tibble’ version ‘3.2.1’ ** package ‘tibble’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9pUCHI/R.INSTALL2a9cc611c5671e/tibble/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c attributes.c -o attributes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c coerce.c -o coerce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c matrixToDataFrame.c -o matrixToDataFrame.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9pUCHI/R.INSTALL2a9cc611c5671e/tibble/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tibble/00new/tibble/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tibble) begin installing package ‘vroom’ begin installing package ‘forcats’ begin installing package ‘dplyr’ begin installing package ‘ggplot2’ * installing *source* package ‘stringi’ ... ** this is package ‘stringi’ version ‘1.8.7’ ** package ‘stringi’ successfully unpacked and MD5 sums checked ** using staged installation checking for R_HOME... /home/hornik/tmp/R-d-clang-xtra checking for R... /home/hornik/tmp/R-d-clang-xtra/bin/R checking for endianness... little checking for cat... /usr/bin/cat checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking whether the C++ compiler supports the 'long long' type... yes checking whether the compiler implements namespaces... yes checking whether the compiler supports the Standard Template Library... yes checking whether std::map is available... yes checking for pkg-config... /usr/bin/pkg-config checking with 'pkg-config' for the system ICU4C (icu-i18n icu-uc)... 76.1 checking for ICU4C >= 61... yes checking for additional CPPFLAGS, LDFLAGS, and LIBS required... done checking whether an ICU4C-based project can be built... yes checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes checking the capabilities of the ICU data library (ucol)... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for elf.h... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/uconfig_local.h config.status: creating src/install.libs.R *** stringi configure summary: ICU_FOUND=1 STRINGI_CXXSTD= STRINGI_CXXFLAGS= -fpic STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H STRINGI_LDFLAGS= -L/usr/lib/x86_64-linux-gnu STRINGI_LIBS= -licui18n -licuuc -licudata *** Compiler settings used: CXX=clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 LD=clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 CXXFLAGS=-g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator CPPFLAGS=-I/usr/local/include LDFLAGS= LIBS= ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQqc4bD/R.INSTALL2a6ef07a73bb3/stringi/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_brkiter.cpp -o stri_brkiter.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_callables.cpp -o stri_callables.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_collator.cpp -o stri_collator.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_common.cpp -o stri_common.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_compare.cpp -o stri_compare.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_base.cpp -o stri_container_base.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_listint.cpp -o stri_container_listint.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_listraw.cpp -o stri_container_listraw.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_listutf8.cpp -o stri_container_listutf8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_regex.cpp -o stri_container_regex.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_usearch.cpp -o stri_container_usearch.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_utf16.cpp -o stri_container_utf16.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_utf8.cpp -o stri_container_utf8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_encoding_detection.cpp -o stri_encoding_detection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_encoding_management.cpp -o stri_encoding_management.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_escape.cpp -o stri_escape.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_exception.cpp -o stri_exception.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_ICU_settings.cpp -o stri_ICU_settings.o In file included from stri_ICU_settings.cpp:37: ./uconfig_local.h:42:9: warning: 'UCONFIG_USE_WINDOWS_LCID_MAPPING_API' macro redefined [-Wmacro-redefined] 42 | #define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 0 | ^ /usr/include/unicode/uconfig.h:391:12: note: previous definition is here 391 | # define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_join.cpp -o stri_join.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_length.cpp -o stri_length.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_pad.cpp -o stri_pad.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_prepare_arg.cpp -o stri_prepare_arg.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_random.cpp -o stri_random.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_reverse.cpp -o stri_reverse.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_count.cpp -o stri_search_class_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_detect.cpp -o stri_search_class_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_extract.cpp -o stri_search_class_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_locate.cpp -o stri_search_class_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_replace.cpp -o stri_search_class_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_split.cpp -o stri_search_class_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_subset.cpp -o stri_search_class_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_class_trim.cpp -o stri_search_class_trim.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_common.cpp -o stri_search_common.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_coll_count.cpp -o stri_search_coll_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_coll_split.cpp -o stri_search_coll_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_in.cpp -o stri_search_in.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_other_split.cpp -o stri_search_other_split.o stri_search_other_split.cpp:202:24: warning: variable 'k' set but not used [-Wunused-but-set-variable] 202 | R_len_t jlast, k=1; | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_regex_count.cpp -o stri_search_regex_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_regex_match.cpp -o stri_search_regex_match.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_regex_split.cpp -o stri_search_regex_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_sort.cpp -o stri_sort.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_sprintf.cpp -o stri_sprintf.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_stats.cpp -o stri_stats.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_string8.cpp -o stri_string8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_stringi.cpp -o stri_stringi.o In file included from stri_stringi.cpp:40: ./uconfig_local.h:42:9: warning: 'UCONFIG_USE_WINDOWS_LCID_MAPPING_API' macro redefined [-Wmacro-redefined] 42 | #define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 0 | ^ /usr/include/unicode/uconfig.h:391:12: note: previous definition is here 391 | # define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_sub.cpp -o stri_sub.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_test.cpp -o stri_test.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_time_zone.cpp -o stri_time_zone.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_time_calendar.cpp -o stri_time_calendar.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_time_symbols.cpp -o stri_time_symbols.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_time_format.cpp -o stri_time_format.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_trans_casemap.cpp -o stri_trans_casemap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_trans_other.cpp -o stri_trans_other.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_trans_normalization.cpp -o stri_trans_normalization.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_ucnv.cpp -o stri_ucnv.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_uloc.cpp -o stri_uloc.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_utils.cpp -o stri_utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stri_wrap.cpp -o stri_wrap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o stringi.so stri_brkiter.o stri_callables.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_sprintf.o stri_stats.o stri_string8.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQqc4bD/R.INSTALL2a6ef07a73bb3/stringi/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-stringi/00new/stringi ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringi) begin installing package ‘stringr’ * installing *source* package ‘RcppEigen’ ... ** this is package ‘RcppEigen’ version ‘0.3.4.0.2’ ** package ‘RcppEigen’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpvw4pwO/R.INSTALL2a94ba4f4fb408/RcppEigen/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppEigen.cpp -o RcppEigen.o In file included from RcppEigen.cpp:22: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:26: In file included from ../inst/include/Eigen/SparseCore:61: ../inst/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppEigen.cpp:22: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:29: In file included from ../inst/include/Eigen/SparseLU:35: ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppEigen.cpp:22: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:31: In file included from ../inst/include/unsupported/Eigen/IterativeSolvers:46: ../inst/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppEigen.cpp:22: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:37: In file included from ../inst/include/unsupported/Eigen/SparseExtra:45: ../inst/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:26: In file included from ../inst/include/Eigen/SparseCore:61: ../inst/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:29: In file included from ../inst/include/Eigen/SparseLU:35: ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:31: In file included from ../inst/include/unsupported/Eigen/IterativeSolvers:46: ../inst/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:37: In file included from ../inst/include/unsupported/Eigen/SparseExtra:45: ../inst/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c fastLm.cpp -o fastLm.o In file included from fastLm.cpp:23: In file included from ./fastLm.h:25: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:26: In file included from ../inst/include/Eigen/SparseCore:61: ../inst/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from fastLm.cpp:23: In file included from ./fastLm.h:25: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:29: In file included from ../inst/include/Eigen/SparseLU:35: ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from fastLm.cpp:23: In file included from ./fastLm.h:25: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:31: In file included from ../inst/include/unsupported/Eigen/IterativeSolvers:46: ../inst/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from fastLm.cpp:23: In file included from ./fastLm.h:25: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:37: In file included from ../inst/include/unsupported/Eigen/SparseExtra:45: ../inst/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o RcppEigen.so RcppEigen.o RcppExports.o fastLm.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpvw4pwO/R.INSTALL2a94ba4f4fb408/RcppEigen/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-RcppEigen/00new/RcppEigen/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppEigen) begin installing package ‘glmnet’ begin installing package ‘lme4’ * installing *source* package ‘forcats’ ... ** this is package ‘forcats’ version ‘1.0.0’ ** package ‘forcats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forcats) * installing *source* package ‘stringr’ ... ** this is package ‘stringr’ version ‘1.5.1’ ** package ‘stringr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringr) begin installing package ‘reshape2’ * installing *source* package ‘ape’ ... ** this is package ‘ape’ version ‘5.8-1’ ** package ‘ape’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQg20dO/R.INSTALL2a94c36841f0eb/ape/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c BIONJ.c -o BIONJ.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c NNI.c -o NNI.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SPR.c -o SPR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c additive.c -o additive.o additive.c:13:9: warning: variable 'm' set but not used [-Wunused-but-set-variable] 13 | int m=*mp; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ape.c -o ape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bNNI.c -o bNNI.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bionjs.c -o bionjs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bipartition.c -o bipartition.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bitsplits.c -o bitsplits.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c delta_plot.c -o delta_plot.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dist_dna.c -o dist_dna.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dist_nodes.c -o dist_nodes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ewLasso.c -o ewLasso.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c heap.c -o heap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mat_expo.c -o mat_expo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c me.c -o me.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c me_balanced.c -o me_balanced.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c me_ols.c -o me_ols.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mvr.c -o mvr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mvrs.c -o mvrs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nj.c -o nj.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c njs.c -o njs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pic.c -o pic.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c plot_phylo.c -o plot_phylo.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c prop_part.cpp -o prop_part.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rTrait.c -o rTrait.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_dna.c -o read_dna.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c reorder_Rcpp.cpp -o reorder_Rcpp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reorder_phylo.c -o reorder_phylo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c treePop.c -o treePop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tree_build.c -o tree_build.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tree_phylo.c -o tree_phylo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c triangMtd.c -o triangMtd.o triangMtd.c:89:9: warning: variable 'ij' set but not used [-Wunused-but-set-variable] 89 | int ij=-1; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c triangMtds.c -o triangMtds.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ultrametric.c -o ultrametric.o ultrametric.c:13:9: warning: variable 'm' set but not used [-Wunused-but-set-variable] 13 | int m=*mp; | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ape.so BIONJ.o NNI.o RcppExports.o SPR.o additive.o ape.o bNNI.o bionjs.o bipartition.o bitsplits.o delta_plot.o dist_dna.o dist_nodes.o ewLasso.o heap.o mat_expo.o me.o me_balanced.o me_ols.o mvr.o mvrs.o nj.o njs.o pic.o plot_phylo.o prop_part.o rTrait.o read_dna.o reorder_Rcpp.o reorder_phylo.o treePop.o tree_build.o tree_phylo.o triangMtd.o triangMtds.o ultrametric.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQg20dO/R.INSTALL2a94c36841f0eb/ape/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ape/00new/ape/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ape) * installing *source* package ‘reshape2’ ... ** this is package ‘reshape2’ version ‘1.4.4’ ** package ‘reshape2’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplkftDp/R.INSTALL2a9e8034be1731/reshape2/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c melt.cpp -o melt.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o reshape2.so RcppExports.o melt.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplkftDp/R.INSTALL2a9e8034be1731/reshape2/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-reshape2/00new/reshape2/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reshape2) * installing *source* package ‘testthat’ ... ** this is package ‘testthat’ version ‘3.2.3’ ** package ‘testthat’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUJlMf6/R.INSTALL2a989e75f76111/testthat/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reassign.c -o reassign.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c test-catch.cpp -o test-catch.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c test-example.cpp -o test-example.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c test-runner.cpp -o test-runner.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUJlMf6/R.INSTALL2a989e75f76111/testthat/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-testthat/00new/testthat/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (testthat) * installing *source* package ‘dplyr’ ... ** this is package ‘dplyr’ version ‘1.1.4’ ** package ‘dplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3Lr8fT/R.INSTALL2a9d3f516c5dc7/dplyr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c chop.cpp -o chop.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c filter.cpp -o filter.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c funs.cpp -o funs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c group_by.cpp -o group_by.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c group_data.cpp -o group_data.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c imports.cpp -o imports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c init.cpp -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c mask.cpp -o mask.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c mutate.cpp -o mutate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c reconstruct.cpp -o reconstruct.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c slice.cpp -o slice.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c summarise.cpp -o summarise.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o reconstruct.o slice.o summarise.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3Lr8fT/R.INSTALL2a9d3f516c5dc7/dplyr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-dplyr/00new/dplyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dplyr) begin installing package ‘tidyr’ begin installing package ‘vcfR’ * installing *source* package ‘tidyr’ ... ** this is package ‘tidyr’ version ‘1.3.1’ ** package ‘tidyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmps2H0EM/R.INSTALL2aa0804b429472/tidyr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c melt.cpp -o melt.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c simplifyPieces.cpp -o simplifyPieces.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tidyr.so cpp11.o melt.o simplifyPieces.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmps2H0EM/R.INSTALL2aa0804b429472/tidyr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tidyr/00new/tidyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyr) begin installing package ‘broom’ * installing *source* package ‘ggplot2’ ... ** this is package ‘ggplot2’ version ‘3.5.2’ ** package ‘ggplot2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggplot2) begin installing package ‘ggrepel’ begin installing package ‘ggsci’ begin installing package ‘cowplot’ begin installing package ‘ggsignif’ begin installing package ‘viridis’ * installing *source* package ‘ggsignif’ ... ** this is package ‘ggsignif’ version ‘0.6.4’ ** package ‘ggsignif’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggsignif) * installing *source* package ‘viridis’ ... ** this is package ‘viridis’ version ‘0.6.5’ ** package ‘viridis’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (viridis) begin installing package ‘dendextend’ * installing *source* package ‘ggsci’ ... ** this is package ‘ggsci’ version ‘3.2.0’ ** package ‘ggsci’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggsci) * installing *source* package ‘cowplot’ ... ** this is package ‘cowplot’ version ‘1.1.3’ ** package ‘cowplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cowplot) * installing *source* package ‘ggrepel’ ... ** this is package ‘ggrepel’ version ‘0.9.6’ ** package ‘ggrepel’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5MG3tP/R.INSTALL2aa1281f5b09de/ggrepel/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c repel_boxes.cpp -o repel_boxes.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ggrepel.so RcppExports.o repel_boxes.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5MG3tP/R.INSTALL2aa1281f5b09de/ggrepel/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ggrepel/00new/ggrepel/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggrepel) * installing *source* package ‘broom’ ... ** this is package ‘broom’ version ‘1.0.8’ ** package ‘broom’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (broom) begin installing package ‘modelr’ * installing *source* package ‘modelr’ ... ** this is package ‘modelr’ version ‘0.1.11’ ** package ‘modelr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modelr) begin installing package ‘doBy’ * installing *source* package ‘dendextend’ ... ** this is package ‘dendextend’ version ‘1.19.0’ ** package ‘dendextend’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dendextend) * installing *source* package ‘lme4’ ... ** this is package ‘lme4’ version ‘1.1-37’ ** package ‘lme4’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCX7mrV/R.INSTALL2a9e191d64a873/lme4/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c external.cpp -o external.o In file included from external.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from external.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from external.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from external.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c glmFamily.cpp -o glmFamily.o In file included from glmFamily.cpp:8: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from glmFamily.cpp:8: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from glmFamily.cpp:8: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from glmFamily.cpp:8: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c optimizer.cpp -o optimizer.o In file included from optimizer.cpp:13: In file included from ./optimizer.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from optimizer.cpp:13: In file included from ./optimizer.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from optimizer.cpp:13: In file included from ./optimizer.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from optimizer.cpp:13: In file included from ./optimizer.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c predModule.cpp -o predModule.o In file included from predModule.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from predModule.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from predModule.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from predModule.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c respModule.cpp -o respModule.o In file included from respModule.cpp:7: In file included from ./respModule.h:12: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from respModule.cpp:7: In file included from ./respModule.h:12: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from respModule.cpp:7: In file included from ./respModule.h:12: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from respModule.cpp:7: In file included from ./respModule.h:12: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o lme4.so external.o glmFamily.o optimizer.o predModule.o respModule.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCX7mrV/R.INSTALL2a9e191d64a873/lme4/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-lme4/00new/lme4/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lme4) begin installing package ‘jomo’ * installing *source* package ‘vroom’ ... ** this is package ‘vroom’ version ‘1.6.5’ ** package ‘vroom’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4QQRed/R.INSTALL2a9d414765a231/vroom/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Iconv.cpp -o Iconv.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c LocaleInfo.cpp -o LocaleInfo.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c altrep.cc -o altrep.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c delimited_index.cc -o delimited_index.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c delimited_index_connection.cc -o delimited_index_connection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c fixed_width_index_connection.cc -o fixed_width_index_connection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c gen.cc -o gen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c grisu3.c -o grisu3.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c guess_type.cc -o guess_type.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c iconv_file.cc -o iconv_file.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c index_collection.cc -o index_collection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom.cc -o vroom.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_big_int.cc -o vroom_big_int.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_chr.cc -o vroom_chr.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_date.cc -o vroom_date.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_dbl.cc -o vroom_dbl.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_dttm.cc -o vroom_dttm.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_errors.cpp -o vroom_errors.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_fct.cc -o vroom_fct.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_fwf.cc -o vroom_fwf.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_int.cc -o vroom_int.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_num.cc -o vroom_num.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_rle.cc -o vroom_rle.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_time.cc -o vroom_time.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/progress/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vroom_write.cc -o vroom_write.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o vroom.so Iconv.o LocaleInfo.o altrep.o cpp11.o delimited_index.o delimited_index_connection.o fixed_width_index_connection.o gen.o grisu3.o guess_type.o iconv_file.o index_collection.o vroom.o vroom_big_int.o vroom_chr.o vroom_date.o vroom_dbl.o vroom_dttm.o vroom_errors.o vroom_fct.o vroom_fwf.o vroom_int.o vroom_num.o vroom_rle.o vroom_time.o vroom_write.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4QQRed/R.INSTALL2a9d414765a231/vroom/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-vroom/00new/vroom/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vroom) begin installing package ‘readr’ * installing *source* package ‘sass’ ... ** this is package ‘sass’ version ‘0.4.10’ ** package ‘sass’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKw5CJs/R.INSTALL2a93676d82107c/sass/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libsass/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compile.c -o compile.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libsass/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c init.cpp -o init.o MAKEFLAGS= CC="clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23" CFLAGS="-g -O3 -Wall -pedantic" CXX="clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17" AR="ar" LDFLAGS="-Wl,-O1" make -C libsass make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpKw5CJs/R.INSTALL2a93676d82107c/sass/src/libsass' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -g -O3 -Wall -pedantic -O2 -I ./include -fPIC -c -o src/cencode.o src/cencode.c clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast.o src/ast.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_values.o src/ast_values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_supports.o src/ast_supports.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_cmp.o src/ast_sel_cmp.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_unify.o src/ast_sel_unify.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_super.o src/ast_sel_super.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_weave.o src/ast_sel_weave.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_selectors.o src/ast_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/context.o src/context.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/constants.o src/constants.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_utils.o src/fn_utils.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_miscs.o src/fn_miscs.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_maps.o src/fn_maps.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_lists.o src/fn_lists.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_colors.o src/fn_colors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_numbers.o src/fn_numbers.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_strings.o src/fn_strings.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_selectors.o src/fn_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/color_maps.o src/color_maps.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/environment.o src/environment.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_fwd_decl.o src/ast_fwd_decl.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/bind.o src/bind.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/file.o src/file.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util.o src/util.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util_string.o src/util_string.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/json.o src/json.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/units.o src/units.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/values.o src/values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/plugins.o src/plugins.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source.o src/source.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/position.o src/position.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/lexer.o src/lexer.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser.o src/parser.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser_selectors.o src/parser_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/prelexer.o src/prelexer.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval.o src/eval.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval_selectors.o src/eval_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/expand.o src/expand.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/listize.o src/listize.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/cssize.o src/cssize.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extender.o src/extender.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extension.o src/extension.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/stylesheet.o src/stylesheet.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/output.o src/output.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/inspect.o src/inspect.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/emitter.o src/emitter.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/check_nesting.o src/check_nesting.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/remove_placeholders.o src/remove_placeholders.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass.o src/sass.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_values.o src/sass_values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_context.o src/sass_context.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_functions.o src/sass_functions.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass2scss.o src/sass2scss.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/backtrace.o src/backtrace.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/operators.o src/operators.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast2c.o src/ast2c.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/c2ast.o src/c2ast.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/to_value.o src/to_value.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source_map.o src/source_map.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/error_handling.o src/error_handling.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/allocator.o src/memory/allocator.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/shared_ptr.o src/memory/shared_ptr.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/utf8_string.o src/utf8_string.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/base64vlq.o src/base64vlq.cpp mkdir lib ar rcvs lib/libsass.a src/cencode.o src/ast.o src/ast_values.o src/ast_supports.o src/ast_sel_cmp.o src/ast_sel_unify.o src/ast_sel_super.o src/ast_sel_weave.o src/ast_selectors.o src/context.o src/constants.o src/fn_utils.o src/fn_miscs.o src/fn_maps.o src/fn_lists.o src/fn_colors.o src/fn_numbers.o src/fn_strings.o src/fn_selectors.o src/color_maps.o src/environment.o src/ast_fwd_decl.o src/bind.o src/file.o src/util.o src/util_string.o src/json.o src/units.o src/values.o src/plugins.o src/source.o src/position.o src/lexer.o src/parser.o src/parser_selectors.o src/prelexer.o src/eval.o src/eval_selectors.o src/expand.o src/listize.o src/cssize.o src/extender.o src/extension.o src/stylesheet.o src/output.o src/inspect.o src/emitter.o src/check_nesting.o src/remove_placeholders.o src/sass.o src/sass_values.o src/sass_context.o src/sass_functions.o src/sass2scss.o src/backtrace.o src/operators.o src/ast2c.o src/c2ast.o src/to_value.o src/source_map.o src/error_handling.o src/memory/allocator.o src/memory/shared_ptr.o src/utf8_string.o src/base64vlq.o a - src/cencode.o a - src/ast.o a - src/ast_values.o a - src/ast_supports.o a - src/ast_sel_cmp.o a - src/ast_sel_unify.o a - src/ast_sel_super.o a - src/ast_sel_weave.o a - src/ast_selectors.o a - src/context.o a - src/constants.o a - src/fn_utils.o a - src/fn_miscs.o a - src/fn_maps.o a - src/fn_lists.o a - src/fn_colors.o a - src/fn_numbers.o a - src/fn_strings.o a - src/fn_selectors.o a - src/color_maps.o a - src/environment.o a - src/ast_fwd_decl.o a - src/bind.o a - src/file.o a - src/util.o a - src/util_string.o a - src/json.o a - src/units.o a - src/values.o a - src/plugins.o a - src/source.o a - src/position.o a - src/lexer.o a - src/parser.o a - src/parser_selectors.o a - src/prelexer.o a - src/eval.o a - src/eval_selectors.o a - src/expand.o a - src/listize.o a - src/cssize.o a - src/extender.o a - src/extension.o a - src/stylesheet.o a - src/output.o a - src/inspect.o a - src/emitter.o a - src/check_nesting.o a - src/remove_placeholders.o a - src/sass.o a - src/sass_values.o a - src/sass_context.o a - src/sass_functions.o a - src/sass2scss.o a - src/backtrace.o a - src/operators.o a - src/ast2c.o a - src/c2ast.o a - src/to_value.o a - src/source_map.o a - src/error_handling.o a - src/memory/allocator.o a - src/memory/shared_ptr.o a - src/utf8_string.o a - src/base64vlq.o make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpKw5CJs/R.INSTALL2a93676d82107c/sass/src/libsass' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o sass.so compile.o init.o ./libsass/lib/libsass.a -L/home/hornik/tmp/R-d-clang-xtra/lib -lR rm -f libsass/lib/libsass.a make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKw5CJs/R.INSTALL2a93676d82107c/sass/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-sass/00new/sass/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sass) begin installing package ‘bslib’ * installing *source* package ‘doBy’ ... ** this is package ‘doBy’ version ‘4.6.26’ ** package ‘doBy’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (doBy) begin installing package ‘pbkrtest’ * installing *source* package ‘glmnet’ ... ** this is package ‘glmnet’ version ‘4.1-8’ ** package ‘glmnet’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2CAbVG/R.INSTALL2a9e1b8fa3d54/glmnet/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iglmnetpp/include -Iglmnetpp/src -Iglmnetpp/test -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. flang-new-19 -fpic -g -O2 -c coxnet5dpclean.f -o coxnet5dpclean.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iglmnetpp/include -Iglmnetpp/src -Iglmnetpp/test -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c elnet_exp.cpp -o elnet_exp.o In file included from elnet_exp.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from elnet_exp.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from elnet_exp.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from elnet_exp.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iglmnetpp/include -Iglmnetpp/src -Iglmnetpp/test -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c glmnet_init.cpp -o glmnet_init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iglmnetpp/include -Iglmnetpp/src -Iglmnetpp/test -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c internal.cpp -o internal.o In file included from internal.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from internal.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from internal.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from internal.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pb.c -o pb.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iglmnetpp/include -Iglmnetpp/src -Iglmnetpp/test -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c pb_exp.cpp -o pb_exp.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iglmnetpp/include -Iglmnetpp/src -Iglmnetpp/test -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c wls_exp.cpp -o wls_exp.o In file included from wls_exp.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from wls_exp.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from wls_exp.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from wls_exp.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o glmnet.so RcppExports.o coxnet5dpclean.o elnet_exp.o glmnet_init.o internal.o pb.o pb_exp.o wls_exp.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2CAbVG/R.INSTALL2a9e1b8fa3d54/glmnet/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-glmnet/00new/glmnet/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmnet) * installing *source* package ‘vcfR’ ... ** this is package ‘vcfR’ version ‘1.15.0’ ** package ‘vcfR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmps8VvrI/R.INSTALL2aa07e40ae27ad/vcfR/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c NM2winNM.cpp -o NM2winNM.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c ad_frequency.cpp -o ad_frequency.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c deprecated_funcs.cpp -o deprecated_funcs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c extract_gt.cpp -o extract_gt.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c freq_peak.cpp -o freq_peak.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c gt_to_popsum.cpp -o gt_to_popsum.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c is_het.cpp -o is_het.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c masplit.cpp -o masplit.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c pair_sort.cpp -o pair_sort.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c rank_variants.cpp -o rank_variants.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c read_vcfR.cpp -o read_vcfR.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c seq_to_rects.cpp -o seq_to_rects.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c var_window.cpp -o var_window.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c vcfRCommon.cpp -o vcfRCommon.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c write_vcfR.cpp -o write_vcfR.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o vcfR.so NM2winNM.o RcppExports.o ad_frequency.o deprecated_funcs.o extract_gt.o freq_peak.o gt_to_popsum.o is_het.o masplit.o pair_sort.o rank_variants.o read_vcfR.o seq_to_rects.o var_window.o vcfRCommon.o write_vcfR.o -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmps8VvrI/R.INSTALL2aa07e40ae27ad/vcfR/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-vcfR/00new/vcfR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘rbind’ from package ‘base’ in package ‘vcfR’ Creating a generic function for ‘nrow’ from package ‘base’ in package ‘vcfR’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vcfR) * installing *source* package ‘bslib’ ... ** this is package ‘bslib’ version ‘0.9.0’ ** package ‘bslib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bslib) begin installing package ‘rmarkdown’ * installing *source* package ‘pbkrtest’ ... ** this is package ‘pbkrtest’ version ‘0.5.3’ ** package ‘pbkrtest’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pbkrtest) begin installing package ‘car’ * installing *source* package ‘rmarkdown’ ... ** this is package ‘rmarkdown’ version ‘2.29’ ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmarkdown) begin installing package ‘htmlwidgets’ * installing *source* package ‘htmlwidgets’ ... ** this is package ‘htmlwidgets’ version ‘1.6.4’ ** package ‘htmlwidgets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmlwidgets) begin installing package ‘htmlTable’ begin installing package ‘plotly’ * installing *source* package ‘htmlTable’ ... ** this is package ‘htmlTable’ version ‘2.4.3’ ** package ‘htmlTable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmlTable) begin installing package ‘Hmisc’ * installing *source* package ‘readr’ ... ** this is package ‘readr’ version ‘2.1.5’ ** package ‘readr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyM9IJW/R.INSTALL2aa4ad78f2559a/readr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Collector.cpp -o Collector.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c CollectorGuess.cpp -o CollectorGuess.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Iconv.cpp -o Iconv.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c LocaleInfo.cpp -o LocaleInfo.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Reader.cpp -o Reader.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Source.cpp -o Source.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Tokenizer.cpp -o Tokenizer.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c TokenizerDelim.cpp -o TokenizerDelim.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c TokenizerFwf.cpp -o TokenizerFwf.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c TokenizerWs.cpp -o TokenizerWs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c connection.cpp -o connection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c datetime.cpp -o datetime.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c grisu3.c -o grisu3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c parse.cpp -o parse.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c read.cpp -o read.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c type_convert.cpp -o type_convert.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c write.cpp -o write.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c write_delim.cpp -o write_delim.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o readr.so Collector.o CollectorGuess.o Iconv.o LocaleInfo.o Reader.o Source.o Tokenizer.o TokenizerDelim.o TokenizerFwf.o TokenizerWs.o connection.o cpp11.o datetime.o grisu3.o init.o parse.o read.o type_convert.o write.o write_delim.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyM9IJW/R.INSTALL2aa4ad78f2559a/readr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-readr/00new/readr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (readr) begin installing package ‘haven’ * installing *source* package ‘car’ ... ** this is package ‘car’ version ‘3.1-3’ ** package ‘car’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (car) begin installing package ‘rstatix’ * installing *source* package ‘plotly’ ... ** this is package ‘plotly’ version ‘4.10.4’ ** package ‘plotly’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plotly) * installing *source* package ‘rstatix’ ... ** this is package ‘rstatix’ version ‘0.7.2’ ** package ‘rstatix’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rstatix) begin installing package ‘ggpubr’ * installing *source* package ‘haven’ ... ** this is package ‘haven’ version ‘2.5.4’ ** package ‘haven’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS= Using PKG_LIBS=-lz ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpYPtQa2/R.INSTALL2aa83d73a55855/haven/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c tagged_na.c -o tagged_na.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/CKHashTable.c -o readstat/CKHashTable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_bits.c -o readstat/readstat_bits.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_convert.c -o readstat/readstat_convert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_error.c -o readstat/readstat_error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_io_unistd.c -o readstat/readstat_io_unistd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_malloc.c -o readstat/readstat_malloc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_metadata.c -o readstat/readstat_metadata.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_parser.c -o readstat/readstat_parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_value.c -o readstat/readstat_value.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_variable.c -o readstat/readstat_variable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/readstat_writer.c -o readstat/readstat_writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/ieee.c -o readstat/sas/ieee.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_sas.c -o readstat/sas/readstat_sas.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_sas7bcat_read.c -o readstat/sas/readstat_sas7bcat_read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_sas7bcat_write.c -o readstat/sas/readstat_sas7bcat_write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_sas7bdat_read.c -o readstat/sas/readstat_sas7bdat_read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_sas7bdat_write.c -o readstat/sas/readstat_sas7bdat_write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_sas_rle.c -o readstat/sas/readstat_sas_rle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_xport.c -o readstat/sas/readstat_xport.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_xport_parse_format.c -o readstat/sas/readstat_xport_parse_format.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_xport_read.c -o readstat/sas/readstat_xport_read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/sas/readstat_xport_write.c -o readstat/sas/readstat_xport_write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_por.c -o readstat/spss/readstat_por.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_por_parse.c -o readstat/spss/readstat_por_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_por_read.c -o readstat/spss/readstat_por_read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_por_write.c -o readstat/spss/readstat_por_write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_sav.c -o readstat/spss/readstat_sav.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_sav_compress.c -o readstat/spss/readstat_sav_compress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_sav_parse.c -o readstat/spss/readstat_sav_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_sav_parse_timestamp.c -o readstat/spss/readstat_sav_parse_timestamp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_sav_read.c -o readstat/spss/readstat_sav_read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_sav_write.c -o readstat/spss/readstat_sav_write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_spss.c -o readstat/spss/readstat_spss.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_spss_parse.c -o readstat/spss/readstat_spss_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_zsav_compress.c -o readstat/spss/readstat_zsav_compress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_zsav_read.c -o readstat/spss/readstat_zsav_read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/spss/readstat_zsav_write.c -o readstat/spss/readstat_zsav_write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/stata/readstat_dta.c -o readstat/stata/readstat_dta.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/stata/readstat_dta_parse_timestamp.c -o readstat/stata/readstat_dta_parse_timestamp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/stata/readstat_dta_read.c -o readstat/stata/readstat_dta_read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -c readstat/stata/readstat_dta_write.c -o readstat/stata/readstat_dta_write.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c DfReader.cpp -o DfReader.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c DfWriter.cpp -o DfWriter.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ireadstat -DHAVE_ZLIB -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c haven_types.cpp -o haven_types.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o haven.so tagged_na.o readstat/CKHashTable.o readstat/readstat_bits.o readstat/readstat_convert.o readstat/readstat_error.o readstat/readstat_io_unistd.o readstat/readstat_malloc.o readstat/readstat_metadata.o readstat/readstat_parser.o readstat/readstat_value.o readstat/readstat_variable.o readstat/readstat_writer.o readstat/sas/ieee.o readstat/sas/readstat_sas.o readstat/sas/readstat_sas7bcat_read.o readstat/sas/readstat_sas7bcat_write.o readstat/sas/readstat_sas7bdat_read.o readstat/sas/readstat_sas7bdat_write.o readstat/sas/readstat_sas_rle.o readstat/sas/readstat_xport.o readstat/sas/readstat_xport_parse_format.o readstat/sas/readstat_xport_read.o readstat/sas/readstat_xport_write.o readstat/spss/readstat_por.o readstat/spss/readstat_por_parse.o readstat/spss/readstat_por_read.o readstat/spss/readstat_por_write.o readstat/spss/readstat_sav.o readstat/spss/readstat_sav_compress.o readstat/spss/readstat_sav_parse.o readstat/spss/readstat_sav_parse_timestamp.o readstat/spss/readstat_sav_read.o readstat/spss/readstat_sav_write.o readstat/spss/readstat_spss.o readstat/spss/readstat_spss_parse.o readstat/spss/readstat_zsav_compress.o readstat/spss/readstat_zsav_read.o readstat/spss/readstat_zsav_write.o readstat/stata/readstat_dta.o readstat/stata/readstat_dta_parse_timestamp.o readstat/stata/readstat_dta_read.o readstat/stata/readstat_dta_write.o DfReader.o DfWriter.o cpp11.o haven_types.o -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpYPtQa2/R.INSTALL2aa83d73a55855/haven/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-haven/00new/haven/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (haven) * installing *source* package ‘ggpubr’ ... ** this is package ‘ggpubr’ version ‘0.6.0’ ** package ‘ggpubr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggpubr) * installing *source* package ‘Hmisc’ ... ** this is package ‘Hmisc’ version ‘5.2-3’ ** package ‘Hmisc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using Fortran compiler: ‘Debian flang-new version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7zlhAr/R.INSTALL2aa821437870a1/Hmisc/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Hmisc.c -o Hmisc.o flang-new-19 -fpic -g -O2 -c cidxcn.f90 -o cidxcn.o flang-new-19 -fpic -g -O2 -c cidxcp.f90 -o cidxcp.o flang-new-19 -fpic -g -O2 -c cutgn.f90 -o cutgn.o flang-new-19 -fpic -g -O2 -c hlqest.f90 -o hlqest.o flang-new-19 -fpic -g -O2 -c hoeffd.f90 -o hoeffd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o flang-new-19 -fpic -g -O2 -c jacklins.f90 -o jacklins.o flang-new-19 -fpic -g -O2 -c largrec.f -o largrec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mChoice.c -o mChoice.o flang-new-19 -fpic -g -O2 -c maxempr.f90 -o maxempr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nstr.c -o nstr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ranksort.c -o ranksort.o flang-new-19 -fpic -g -O2 -c rcorr.f90 -o rcorr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c string_box.c -o string_box.o flang-new-19 -fpic -g -O2 -c wclosest.f90 -o wclosest.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Hmisc.so Hmisc.o cidxcn.o cidxcp.o cutgn.o hlqest.o hoeffd.o init.o jacklins.o largrec.o mChoice.o maxempr.o nstr.o ranksort.o rcorr.o string_box.o wclosest.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7zlhAr/R.INSTALL2aa821437870a1/Hmisc/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Hmisc/00new/Hmisc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Hmisc) * installing *source* package ‘jomo’ ... ** this is package ‘jomo’ version ‘2.7-6’ ** package ‘jomo’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeEDjaX/R.INSTALL2aa43439de8220/jomo/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo1C.c -o jomo1C.o jomo1C.c:13:157: warning: variable 'indic' set but not used [-Wunused-but-set-variable] 13 | int i,j,k, IY,JY, IX, JX, Io, Jo, Ib, Jb, ns, nmiss=0,t, countm=0, counto=0, countmm=0, countmo=0, countoo=0, jj, tt, kk, ncon,ncat, pos,flag=0,nmaxx,h,fl, indic=0,currncat, MCMC, np; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo1ranC.c -o jomo1ranC.o jomo1ranC.c:13:5: warning: variable 'indic' set but not used [-Wunused-but-set-variable] 13 | int indic=0,i,j,k, IY,JY, IX, JX, Io, Jo, Ib, Jb, ns, nmiss=0,t, countm=0, counto=0, countmm=0, countmo=0,countoo=0, jj, tt, kk, ncon,ncat, pos,flag=0,nmaxx,h; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo1ranhrC.c -o jomo1ranhrC.o jomo1ranhrC.c:13:5: warning: variable 'indic' set but not used [-Wunused-but-set-variable] 13 | int indic=0,i,j,k, IY,JY, IX, JX, Io, Jo, Ib, Jb, ns, nmiss=0,t, countm=0, counto=0, countmm=0, countmo=0,countoo=0, jj, tt, kk, ncon,ncat, pos,flag=0,nmaxx,h; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo1ranhrsmcC.c -o jomo1ranhrsmcC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo1ransmcC.c -o jomo1ransmcC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo1smcC.c -o jomo1smcC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo2comC.c -o jomo2comC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo2hrC.c -o jomo2hrC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo2hrsmcC.c -o jomo2hrsmcC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo2smcC.c -o jomo2smcC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jomo_init.c -o jomo_init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pdflib.c -o pdflib.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wishart.c -o wishart.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o jomo.so jomo1C.o jomo1ranC.o jomo1ranhrC.o jomo1ranhrsmcC.o jomo1ransmcC.o jomo1smcC.o jomo2comC.o jomo2hrC.o jomo2hrsmcC.o jomo2smcC.o jomo_init.o pdflib.o wishart.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeEDjaX/R.INSTALL2aa43439de8220/jomo/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-jomo/00new/jomo/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jomo) begin installing package ‘mitml’ * installing *source* package ‘mitml’ ... ** this is package ‘mitml’ version ‘0.4-5’ ** package ‘mitml’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mitml) begin installing package ‘mice’ * installing *source* package ‘mice’ ... ** this is package ‘mice’ version ‘3.17.0’ ** package ‘mice’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5KksEj/R.INSTALL2aad713b9ae3c0/mice/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c legendre.cpp -o legendre.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c match.cpp -o match.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c matchindex.cpp -o matchindex.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o mice.so RcppExports.o legendre.o match.o matchindex.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5KksEj/R.INSTALL2aad713b9ae3c0/mice/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-mice/00new/mice/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mice) begin installing package ‘weights’ * installing *source* package ‘weights’ ... ** this is package ‘weights’ version ‘1.0.4’ ** package ‘weights’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpA0SYy5/R.INSTALL2aaeac63349cfc/weights/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wcorr.c -o wcorr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o weights.so init.o wcorr.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpA0SYy5/R.INSTALL2aaeac63349cfc/weights/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-weights/00new/weights/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (weights) begin installing package ‘smacof’ * installing *source* package ‘smacof’ ... ** this is package ‘smacof’ version ‘2.1-7’ ** package ‘smacof’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9pUb4J/R.INSTALL2aaefca3afbd9/smacof/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nextperm.c -o nextperm.o nextperm.c:20:24: warning: unused variable 'r' [-Wunused-variable] 20 | int i, j, r, s, n = *nn; | ^ nextperm.c:20:27: warning: unused variable 's' [-Wunused-variable] 20 | int i, j, r, s, n = *nn; | ^ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c weightedMean.c -o weightedMean.o weightedMean.c:24:7: warning: variable 'i' set but not used [-Wunused-but-set-variable] 24 | int i, k, l, ind, nprevties; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wmonreg.c -o wmonreg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o smacof.so init.o nextperm.o weightedMean.o wmonreg.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9pUb4J/R.INSTALL2aaefca3afbd9/smacof/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-smacof/00new/smacof/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smacof) checking onemap_3.2.1.tar.gz ... Depends: Package: onemap Depends: R (>= 3.6.0) Imports: ggplot2 (>= 2.2.1), plotly (>= 4.7.1), reshape2 (>= 1.4.1), Rcpp (>= 0.10.5), graphics, methods, stats, utils, grDevices, smacof, princurve, parallel, dplyr, tidyr, htmlwidgets, ggpubr, RColorBrewer, dendextend, rebus, vcfR (>= 1.6.0) LinkingTo: Rcpp (>= 1.0.0) Timings: user system elapsed onemap 395.872 27.434 424.473 Results: Check status summary: OK Source packages 1 Check results summary: onemap ... OK