* installing *source* package 'onemap' ... ** this is package 'onemap' version '3.2.1' ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 14.2.0' using C++ compiler: 'g++.exe (GCC) 14.2.0' g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c find_bins.cpp -o find_bins.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c hmm_bc.cpp -o hmm_bc.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c hmm_f2.cpp -o hmm_f2.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c hmm_out.cpp -o hmm_out.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c onemap_init.c -o onemap_init.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c out_est.cpp -o out_est.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c twopts_bc.cpp -o twopts_bc.o twopts_bc.cpp: In function 'Rcpp::NumericMatrix est_rf_bc(Rcpp::NumericVector, int, int, int, int)': twopts_bc.cpp:117:27: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] 117 | if(k_sub.size() != n_ind || k1_sub.size() != n_ind) { | ~~~~~~~~~~~~~^~~~~~~~ twopts_bc.cpp:117:53: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] 117 | if(k_sub.size() != n_ind || k1_sub.size() != n_ind) { | ~~~~~~~~~~~~~~^~~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c twopts_out.cpp -o twopts_out.o twopts_out.cpp: In function 'Rcpp::List est_rf_out(Rcpp::NumericVector, int, Rcpp::IntegerVector, int, int)': twopts_out.cpp:122:21: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] 122 | if(k_sub.size() != n_ind || k1_sub.size() != n_ind) { | ~~~~~~~~~~~~~^~~~~~~~ twopts_out.cpp:122:47: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] 122 | if(k_sub.size() != n_ind || k1_sub.size() != n_ind) { | ~~~~~~~~~~~~~~^~~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c utils.cpp -o utils.o g++ -std=gnu++17 -shared -s -static-libgcc -o onemap.dll tmp.def find_bins.o hmm_bc.o hmm_f2.o hmm_out.o onemap_init.o out_est.o twopts_bc.o twopts_out.o utils.o -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-onemap/00new/onemap/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (onemap)