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Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(oncmap) > > test_check("oncmap") New names: * `` -> `...2` New names: * `` -> `...2` New names: * `` -> `...2` [ FAIL 8 | WARN 0 | SKIP 0 | PASS 27 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-process_eamd-script.R:3:3'): process_eamd processing ───────── round(process_eamd(input_file)$adh, 4) (`actual`) not equal to data.frame(...) (`expected`). actual vs expected daysadh daysdose perdoses n - actual[1, ] 0.5652 0.6957 0.8261 23 + expected[1, ] 0.5833 0.7083 0.8333 24 `actual$daysadh`: 0.565 `expected$daysadh`: 0.583 `actual$daysdose`: 0.696 `expected$daysdose`: 0.708 `actual$perdoses`: 0.8261 `expected$perdoses`: 0.8333 `actual$n`: 23.0 `expected$n`: 24.0 ── Failure ('test-process_eamd-script.R:11:3'): process_eamd processing ──────── round(...) (`actual`) not equal to data.frame(...) (`expected`). actual vs expected daysadh daysdose perdoses n - actual[1, ] 0.2174 0.7391 1.3571 23 + expected[1, ] 0.2083 0.7083 1.2500 24 `actual$daysadh`: 0.2174 `expected$daysadh`: 0.2083 `actual$daysdose`: 0.739 `expected$daysdose`: 0.708 `actual$perdoses`: 1.36 `expected$perdoses`: 1.25 `actual$n`: 23.0 `expected$n`: 24.0 ── Failure ('test-process_eamd-script.R:19:3'): process_eamd processing ──────── round(report$adh, 4) (`actual`) not equal to data.frame(daysadh = 0.6, daysdose = 0.7, perdoses = 0.8, n = 20) (`expected`). actual vs expected daysadh daysdose perdoses n - actual[1, ] 0.5789 0.6842 0.7895 19 + expected[1, ] 0.6000 0.7000 0.8000 20 `actual$daysadh`: 0.579 `expected$daysadh`: 0.600 `actual$daysdose`: 0.684 `expected$daysdose`: 0.700 `actual$perdoses`: 0.789 `expected$perdoses`: 0.800 `actual$n`: 19.0 `expected$n`: 20.0 ── Failure ('test-process_eamd.R:5:3'): process_eamd processing ──────────────── round(process_eamd("test_ecap2.xls")$adh, 4) (`actual`) not equal to data.frame(...) (`expected`). actual vs expected daysadh daysdose perdoses n - actual[1, ] 0.0482 0.0799 0.1116 726 + expected[1, ] 0.0495 0.0812 0.1128 727 `actual$daysadh`: 0.0482 `expected$daysadh`: 0.0495 `actual$daysdose`: 0.0799 `expected$daysdose`: 0.0812 `actual$perdoses`: 0.1116 `expected$perdoses`: 0.1128 `actual$n`: 726.0 `expected$n`: 727.0 ── Failure ('test-process_eamd.R:6:3'): process_eamd processing ──────────────── round(...) (`actual`) not equal to data.frame(...) (`expected`). actual vs expected daysadh daysdose perdoses n - actual[1, ] 0.0482 0.0799 0.1116 726 + expected[1, ] 0.0495 0.0812 0.1128 727 `actual$daysadh`: 0.0482 `expected$daysadh`: 0.0495 `actual$daysdose`: 0.0799 `expected$daysdose`: 0.0812 `actual$perdoses`: 0.1116 `expected$perdoses`: 0.1128 `actual$n`: 726.0 `expected$n`: 727.0 ── Failure ('test-process_eamd.R:7:3'): process_eamd processing ──────────────── round(...) (`actual`) not equal to data.frame(...) (`expected`). actual vs expected daysadh daysdose perdoses n - actual[1, ] 0.0482 0.0799 0.1116 726 + expected[1, ] 0.0495 0.0812 0.1128 727 `actual$daysadh`: 0.0482 `expected$daysadh`: 0.0495 `actual$daysdose`: 0.0799 `expected$daysdose`: 0.0812 `actual$perdoses`: 0.1116 `expected$perdoses`: 0.1128 `actual$n`: 726.0 `expected$n`: 727.0 ── Failure ('test-process_eamd.R:8:3'): process_eamd processing ──────────────── round(...) (`actual`) not equal to data.frame(...) (`expected`). actual vs expected daysadh daysdose perdoses n - actual[1, ] 0.0482 0.0799 0.1116 726 + expected[1, ] 0.0495 0.0812 0.1128 727 `actual$daysadh`: 0.0482 `expected$daysadh`: 0.0495 `actual$daysdose`: 0.0799 `expected$daysdose`: 0.0812 `actual$perdoses`: 0.1116 `expected$perdoses`: 0.1128 `actual$n`: 726.0 `expected$n`: 727.0 ── Failure ('test-process_eamd.R:9:3'): process_eamd processing ──────────────── round(...) (`actual`) not equal to data.frame(...) (`expected`). actual vs expected daysadh daysdose perdoses n - actual[1, ] 0.0482 0.0799 0.1116 726 + expected[1, ] 0.0495 0.0812 0.1128 727 `actual$daysadh`: 0.0482 `expected$daysadh`: 0.0495 `actual$daysdose`: 0.0799 `expected$daysdose`: 0.0812 `actual$perdoses`: 0.1116 `expected$perdoses`: 0.1128 `actual$n`: 726.0 `expected$n`: 727.0 [ FAIL 8 | WARN 0 | SKIP 0 | PASS 27 ] Error: Test failures Execution halted