downloading reverse dependencies ... downloading apmx_1.1.1.tar.gz ... ok downloading assertHE_1.0.0.tar.gz ... ok downloading augmentedRCBD_0.1.7.tar.gz ... ok downloading autoReg_0.3.3.tar.gz ... ok downloading autoslider.core_0.3.1.tar.gz ... ok downloading bfw_0.4.2.tar.gz ... ok downloading clinify_0.3.0.tar.gz ... ok downloading codebookr_0.1.8.tar.gz ... ok downloading compareGroups_4.10.1.tar.gz ... ok downloading crosstable_0.8.2.tar.gz ... ok downloading demoGraphic_0.1.0.tar.gz ... ok downloading DemographicTable_0.2.3.tar.gz ... ok downloading documenter_0.1.3.tar.gz ... ok downloading eoffice_0.2.2.tar.gz ... ok downloading epiR_2.0.88.tar.gz ... ok downloading EpiReport_1.0.4.tar.gz ... ok downloading examly_0.1.2.tar.gz ... ok downloading export_0.3.2.tar.gz ... ok downloading flextable_0.9.10.tar.gz ... ok downloading GRShiny_1.0.1.tar.gz ... ok downloading gto_0.1.2.tar.gz ... ok downloading gtregression_1.0.0.tar.gz ... ok downloading GWSDAT_3.2.1.tar.gz ... ok downloading interactionR_0.1.7.tar.gz ... ok downloading interpretCI_0.1.1.tar.gz ... ok downloading inTextSummaryTable_3.3.5.tar.gz ... ok downloading ivo.table_0.7.1.tar.gz ... ok downloading jsmodule_1.6.15.tar.gz ... ok downloading kfa_0.2.2.tar.gz ... ok downloading LLMAgentR_0.3.0.tar.gz ... ok downloading MCPModPack_0.5.tar.gz ... ok downloading MedianaDesigner_0.13.tar.gz ... ok downloading metacor_1.2.0.tar.gz ... ok downloading microplot_1.0-47.tar.gz ... ok downloading mschart_0.4.1.tar.gz ... ok downloading officedown_0.4.1.tar.gz ... ok downloading onbrand_1.0.7.tar.gz ... ok downloading pmxcode_0.3.1.tar.gz ... ok downloading presenter_0.1.2.tar.gz ... ok downloading r2pptx_0.1.0.tar.gz ... ok downloading RAGFlowChainR_0.1.5.tar.gz ... ok downloading reappraised_0.1.1.tar.gz ... ok downloading relMix_1.4.1.tar.gz ... ok downloading repmod_0.1.7.tar.gz ... ok downloading revise_0.1.0.tar.gz ... ok downloading robmedExtra_0.1.1.tar.gz ... ok downloading Rrepest_1.5.4.tar.gz ... ok downloading rrtable_0.3.0.tar.gz ... ok downloading rsides_0.1.tar.gz ... ok downloading rtables.officer_0.1.1.tar.gz ... ok downloading rvg_0.4.0.tar.gz ... ok downloading saros_1.6.0.tar.gz ... ok downloading summarySCI_0.1.1.tar.gz ... ok downloading SUMO_1.2.3.tar.gz ... ok downloading survC_0.1.0.tar.gz ... ok downloading TestAnaAPP_1.1.2.tar.gz ... ok downloading thinkr_0.16.tar.gz ... ok downloading VisualizeSimon2Stage_0.2.2.tar.gz ... ok downloading visvaR_1.0.0.tar.gz ... ok downloading washi_0.2.1.tar.gz ... ok downloading WordR_0.3.6.tar.gz ... ok downloading xlsform2word_0.1.0.tar.gz ... ok downloading ztable_0.2.3.tar.gz ... ok downloading accessr_1.1.3.tar.gz ... ok downloading activAnalyzer_2.1.2.tar.gz ... ok downloading basictabler_1.0.4.tar.gz ... ok downloading esquisse_2.1.0.tar.gz ... ok downloading flexlsx_0.3.5.tar.gz ... ok downloading gtsummary_2.4.0.tar.gz ... ok downloading huxtable_5.8.0.tar.gz ... ok downloading kardl_0.1.1.tar.gz ... ok downloading manymome.table_0.4.0.tar.gz ... ok downloading Mediana_1.0.8.tar.gz ... ok downloading mitey_0.2.0.tar.gz ... ok downloading modelsummary_2.5.0.tar.gz ... ok downloading pdfcombiner_1.9.8.tar.gz ... ok downloading r2rtf_1.2.0.tar.gz ... ok downloading reservr_0.0.3.tar.gz ... ok downloading rmsMD_1.0.1.tar.gz ... ok downloading statgenGWAS_1.0.12.tar.gz ... ok downloading strand_0.2.2.tar.gz ... ok downloading SurveyDefense_0.2.0.tar.gz ... ok downloading table1_1.5.1.tar.gz ... ok downloading toxSummary_1.0.0.tar.gz ... ok downloading ubiquity_2.1.0.tar.gz ... ok downloading visOmopResults_1.4.0.tar.gz ... ok installing dependencies ‘altdoc’, ‘asaur’, ‘babelmixr2’, ‘basilisk’, ‘bruceR’, ‘cicerone’, ‘clinUtils’, ‘CohortCharacteristics’, ‘datamods’, ‘did’, ‘difR’, ‘doconv’, ‘docxtractr’, ‘editData’, ‘epiDisplay’, ‘EpiLPS’, ‘equatags’, ‘EstCRM’, ‘evmix’, ‘expss’, ‘extrafont’, ‘fabia’, ‘Familias’, ‘filters’, ‘finalfit’, ‘forestploter’, ‘framecleaner’, ‘ftExtra’, ‘gtExtras’, ‘HardyWeinberg’, ‘hrbrthemes’, ‘IncidencePrevalence’, ‘jskm’, ‘jstable’, ‘keras3’, ‘knitrdata’, ‘LMMsolver’, ‘logKDE’, ‘lordif’, ‘manymome’, ‘modeltime’, ‘modeltime.ensemble’, ‘modeltime.resample’, ‘MOFA2’, ‘MOFAdata’, ‘moonBook’, ‘mschart’, ‘nestcolor’, ‘nlWaldTest’, ‘numform’, ‘officedown’, ‘officer’, ‘onbrand’, ‘PairedData’, ‘pandoc’, ‘papaja’, ‘pedFamilias’, ‘phosphoricons’, ‘PhysicalActivity’, ‘PKNCA’, ‘psychometric’, ‘Rdatasets’, ‘risks’, ‘rlistings’, ‘robmed’, ‘shiny’, ‘shinycustomloader’, ‘simstandard’, ‘sloop’, ‘smd’, ‘staplr’, ‘survIDINRI’, ‘tern’, ‘tesseract’, ‘this.path’, ‘tidycmprsk’, ‘Tplyr’, ‘vcdExtra’, ‘worcs’, ‘xgboost’, ‘ztable’ Warning: packages ‘knitrdata’, ‘hrbrthemes’ are not available for this version of R Versions of these packages for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘aweek’, ‘coarseDataTools’, ‘incidence’, ‘xgxr’, ‘n1qn1’, ‘locatexec’, ‘maditr’, ‘multilevel’, ‘xslt’, ‘katex’, ‘bcaboot’, ‘Rttf2pt1’, ‘survC1’, ‘tinylabels’, ‘rmdfiltr’, ‘prereg’, ‘dir.expiry’, ‘interactions’, ‘deltaPlotR’, ‘toastui’, ‘lmhelprs’, ‘EpiEstim’, ‘DRDID’, ‘dotty’, ‘nlmixr2extra’, ‘nlmixr2plot’, ‘nlmixr2est’, ‘nonmem2rx’, ‘monolix2rx’ begin installing package ‘aweek’ begin installing package ‘coarseDataTools’ begin installing package ‘xgxr’ begin installing package ‘n1qn1’ begin installing package ‘locatexec’ begin installing package ‘multilevel’ begin installing package ‘maditr’ begin installing package ‘xslt’ begin installing package ‘katex’ begin installing package ‘bcaboot’ begin installing package ‘Rttf2pt1’ begin installing package ‘survC1’ begin installing package ‘tinylabels’ begin installing package ‘rmdfiltr’ begin installing package ‘prereg’ begin installing package ‘dir.expiry’ begin installing package ‘interactions’ begin installing package ‘deltaPlotR’ begin installing package ‘lmhelprs’ begin installing package ‘DRDID’ begin installing package ‘dotty’ begin installing package ‘nonmem2rx’ begin installing package ‘monolix2rx’ begin installing package ‘this.path’ begin installing package ‘numform’ begin installing package ‘moonBook’ begin installing package ‘tidycmprsk’ begin installing package ‘finalfit’ * installing *source* package ‘dotty’ ... ** this is package ‘dotty’ version ‘0.1.0’ ** package ‘dotty’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dotty) begin installing package ‘asaur’ * installing *source* package ‘rmdfiltr’ ... ** this is package ‘rmdfiltr’ version ‘0.1.5’ ** package ‘rmdfiltr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmdfiltr) begin installing package ‘PairedData’ * installing *source* package ‘prereg’ ... ** this is package ‘prereg’ version ‘0.6.0’ ** package ‘prereg’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prereg) begin installing package ‘rlistings’ * installing *source* package ‘dir.expiry’ ... ** this is package ‘dir.expiry’ version ‘1.18.0’ ** package ‘dir.expiry’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dir.expiry) begin installing package ‘filters’ * installing *source* package ‘aweek’ ... ** this is package ‘aweek’ version ‘1.0.3’ ** package ‘aweek’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aweek) begin installing package ‘nestcolor’ * installing *source* package ‘locatexec’ ... ** this is package ‘locatexec’ version ‘0.1.1’ ** package ‘locatexec’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (locatexec) begin installing package ‘Tplyr’ * installing *source* package ‘deltaPlotR’ ... ** this is package ‘deltaPlotR’ version ‘1.6’ ** package ‘deltaPlotR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (deltaPlotR) begin installing package ‘HardyWeinberg’ * installing *source* package ‘lmhelprs’ ... ** this is package ‘lmhelprs’ version ‘0.4.3’ ** package ‘lmhelprs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lmhelprs) begin installing package ‘sloop’ * installing *source* package ‘bcaboot’ ... ** this is package ‘bcaboot’ version ‘0.2-3’ ** package ‘bcaboot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bcaboot) begin installing package ‘clinUtils’ * installing *source* package ‘tinylabels’ ... ** this is package ‘tinylabels’ version ‘0.2.5’ ** package ‘tinylabels’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinylabels) begin installing package ‘epiDisplay’ * installing *source* package ‘katex’ ... ** this is package ‘katex’ version ‘1.5.0’ ** package ‘katex’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (katex) begin installing package ‘forestploter’ * installing *source* package ‘asaur’ ... ** this is package ‘asaur’ version ‘0.50’ ** package ‘asaur’ successfully unpacked and MD5 sums checked ** using staged installation ** data *** moving datasets to lazyload DB ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (asaur) begin installing package ‘jskm’ * installing *source* package ‘maditr’ ... ** this is package ‘maditr’ version ‘0.8.6’ ** package ‘maditr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (maditr) begin installing package ‘jstable’ * installing *source* package ‘numform’ ... ** this is package ‘numform’ version ‘0.7.0’ ** package ‘numform’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (numform) begin installing package ‘simstandard’ * installing *source* package ‘multilevel’ ... ** this is package ‘multilevel’ version ‘2.7.1’ ** package ‘multilevel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (multilevel) begin installing package ‘tesseract’ * installing *source* package ‘filters’ ... ** this is package ‘filters’ version ‘0.3.1’ ** package ‘filters’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (filters) begin installing package ‘framecleaner’ * installing *source* package ‘nestcolor’ ... ** this is package ‘nestcolor’ version ‘0.1.3’ ** package ‘nestcolor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nestcolor) begin installing package ‘vcdExtra’ * installing *source* package ‘sloop’ ... ** this is package ‘sloop’ version ‘1.0.1’ ** package ‘sloop’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sloop) begin installing package ‘Familias’ * installing *source* package ‘moonBook’ ... ** this is package ‘moonBook’ version ‘0.3.1’ ** package ‘moonBook’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (moonBook) begin installing package ‘pedFamilias’ * installing *source* package ‘survC1’ ... ** this is package ‘survC1’ version ‘1.0-3’ ** package ‘survC1’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpIOH60z/R.INSTALL59731120ba64c/survC1/src' gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c husurvC1v1.f -o husurvC1v1.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survC1_init.c -o survC1_init.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o survC1.so husurvC1v1.o survC1_init.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpIOH60z/R.INSTALL59731120ba64c/survC1/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-survC1/00new/survC1/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survC1) begin installing package ‘docxtractr’ * installing *source* package ‘framecleaner’ ... ** this is package ‘framecleaner’ version ‘0.2.1’ ** package ‘framecleaner’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (framecleaner) begin installing package ‘robmed’ * installing *source* package ‘simstandard’ ... ** this is package ‘simstandard’ version ‘0.6.3’ ** package ‘simstandard’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (simstandard) begin installing package ‘MOFAdata’ * installing *source* package ‘forestploter’ ... ** this is package ‘forestploter’ version ‘1.1.3’ ** package ‘forestploter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forestploter) begin installing package ‘fabia’ * installing *source* package ‘rlistings’ ... ** this is package ‘rlistings’ version ‘0.2.12’ ** package ‘rlistings’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlistings) begin installing package ‘EstCRM’ * installing *source* package ‘clinUtils’ ... ** this is package ‘clinUtils’ version ‘0.2.1’ ** package ‘clinUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clinUtils) begin installing package ‘lordif’ * installing *source* package ‘MOFAdata’ ... ** this is package ‘MOFAdata’ version ‘1.26.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MOFAdata) begin installing package ‘PhysicalActivity’ * installing *source* package ‘PairedData’ ... ** this is package ‘PairedData’ version ‘1.1.1’ ** package ‘PairedData’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘summary’ in package ‘PairedData’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PairedData) begin installing package ‘phosphoricons’ * installing *source* package ‘coarseDataTools’ ... ** this is package ‘coarseDataTools’ version ‘0.7.2’ ** package ‘coarseDataTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (coarseDataTools) begin installing package ‘smd’ * installing *source* package ‘docxtractr’ ... ** this is package ‘docxtractr’ version ‘0.6.5’ ** package ‘docxtractr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (docxtractr) begin installing package ‘officer’ * installing *source* package ‘Rttf2pt1’ ... ** this is package ‘Rttf2pt1’ version ‘1.3.14’ ** package ‘Rttf2pt1’ successfully unpacked and MD5 sums checked ** using staged installation ** libs make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzUMnIe/R.INSTALL5971a52b3200f/Rttf2pt1/src' echo "make ttf2pt1 in ttf2pt1/ ..." make ttf2pt1 in ttf2pt1/ ... (cd ttf2pt1; make CC="`"/home/hornik/tmp/R/bin/R" CMD config CC`" CFLAGS="-g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native " ttf2pt1) make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpzUMnIe/R.INSTALL5971a52b3200f/Rttf2pt1/src/ttf2pt1' gcc-15 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ttf2pt1.c gcc-15 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt1.c gcc-15 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c runt1asm.c gcc-15 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ttf.c gcc-15 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ft.c gcc-15 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bdf.c gcc-15 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bitmap.c gcc-15 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -o ttf2pt1 ttf2pt1.o pt1.o runt1asm.o ttf.o ft.o bdf.o bitmap.o -lm make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpzUMnIe/R.INSTALL5971a52b3200f/Rttf2pt1/src/ttf2pt1' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzUMnIe/R.INSTALL5971a52b3200f/Rttf2pt1/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Rttf2pt1/00new/Rttf2pt1 [1] "" Installing ttf2pt1/ttf2pt1 to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Rttf2pt1/00new/Rttf2pt1/exec ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rttf2pt1) begin installing package ‘nlWaldTest’ * installing *source* package ‘interactions’ ... ** this is package ‘interactions’ version ‘1.2.0’ ** package ‘interactions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (interactions) begin installing package ‘altdoc’ * installing *source* package ‘tidycmprsk’ ... ** this is package ‘tidycmprsk’ version ‘1.1.1’ ** package ‘tidycmprsk’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidycmprsk) begin installing package ‘gtExtras’ * installing *source* package ‘PhysicalActivity’ ... ** this is package ‘PhysicalActivity’ version ‘0.2-4’ ** package ‘PhysicalActivity’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PhysicalActivity) begin installing package ‘pandoc’ * installing *source* package ‘smd’ ... ** this is package ‘smd’ version ‘0.8.0’ ** package ‘smd’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smd) begin installing package ‘Rdatasets’ * installing *source* package ‘pedFamilias’ ... ** this is package ‘pedFamilias’ version ‘0.2.4’ ** package ‘pedFamilias’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pedFamilias) begin installing package ‘staplr’ * installing *source* package ‘nlWaldTest’ ... ** this is package ‘nlWaldTest’ version ‘1.1.3’ ** package ‘nlWaldTest’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlWaldTest) begin installing package ‘evmix’ * installing *source* package ‘xslt’ ... ** this is package ‘xslt’ version ‘1.5.1’ ** package ‘xslt’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/libxml2 Using PKG_LIBS=-lexslt -lxslt -lxml2 ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpu4KXF6/R.INSTALL597197d820af3/xslt/src' rm -f RcppExports.o xslt.o xslt_init.o xslt.so g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/libxml2 -DSTRICT_R_HEADERS -DSTRICT_R_HEADERS -DR_NO_REMAP -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/xml2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/libxml2 -DSTRICT_R_HEADERS -DSTRICT_R_HEADERS -DR_NO_REMAP -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/xml2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c xslt.cpp -o xslt.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/libxml2 -DSTRICT_R_HEADERS -DSTRICT_R_HEADERS -DR_NO_REMAP -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/xml2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c xslt_init.cpp -o xslt_init.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o xslt.so RcppExports.o xslt.o xslt_init.o -lexslt -lxslt -lxml2 -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpu4KXF6/R.INSTALL597197d820af3/xslt/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-xslt/00new/xslt/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xslt) begin installing package ‘logKDE’ * installing *source* package ‘phosphoricons’ ... ** this is package ‘phosphoricons’ version ‘0.2.1’ ** package ‘phosphoricons’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phosphoricons) begin installing package ‘LMMsolver’ * installing *source* package ‘n1qn1’ ... ** this is package ‘n1qn1’ version ‘6.0.1-12’ ** package ‘n1qn1’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDiGKOp/R.INSTALL596f55620df25/n1qn1/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ajour.c -o ajour.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c calmaj.c -o calmaj.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c n1qn1_all.c -o n1qn1_all.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c proj.c -o proj.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c satur.c -o satur.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExpMod.cpp -o RcppExpMod.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o n1qn1.so ajour.o calmaj.o init.o n1qn1_all.o proj.o satur.o RcppExpMod.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDiGKOp/R.INSTALL596f55620df25/n1qn1/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-n1qn1/00new/n1qn1/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (n1qn1) begin installing package ‘PKNCA’ * installing *source* package ‘Tplyr’ ... ** this is package ‘Tplyr’ version ‘1.2.1’ ** package ‘Tplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Tplyr) begin installing package ‘CohortCharacteristics’ * installing *source* package ‘EstCRM’ ... ** this is package ‘EstCRM’ version ‘1.6’ ** package ‘EstCRM’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EstCRM) begin installing package ‘IncidencePrevalence’ * installing *source* package ‘Rdatasets’ ... ** this is package ‘Rdatasets’ version ‘0.0.1’ ** package ‘Rdatasets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rdatasets) begin installing package ‘shiny’ * installing *source* package ‘altdoc’ ... ** this is package ‘altdoc’ version ‘0.7.0’ ** package ‘altdoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (altdoc) begin installing package ‘xgboost’ * installing *source* package ‘DRDID’ ... ** this is package ‘DRDID’ version ‘1.2.2’ ** package ‘DRDID’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpf27GUo/R.INSTALL5974551f36f8f/DRDID/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sanity_checks.cpp -o sanity_checks.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o DRDID.so RcppExports.o sanity_checks.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpf27GUo/R.INSTALL5974551f36f8f/DRDID/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-DRDID/00new/DRDID/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DRDID) begin installing package ‘incidence’ * installing *source* package ‘pandoc’ ... ** this is package ‘pandoc’ version ‘0.2.0’ ** package ‘pandoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pandoc) begin installing package ‘nlmixr2est’ * installing *source* package ‘xgxr’ ... ** this is package ‘xgxr’ version ‘1.1.2’ ** package ‘xgxr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xgxr) begin installing package ‘doconv’ * installing *source* package ‘vcdExtra’ ... ** this is package ‘vcdExtra’ version ‘0.8-6’ ** package ‘vcdExtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vcdExtra) begin installing package ‘tern’ * installing *source* package ‘this.path’ ... ** this is package ‘this.path’ version ‘2.7.1’ ** package ‘this.path’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpAsSbZ0/R.INSTALL5974d6bc95562/this.path/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c 0.c -o 0.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c aquarootscript.c -o aquarootscript.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c backports.c -o backports.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c basename2.c -o basename2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c error.c -o error.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ext.c -o ext.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c files.c -o files.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ns-hooks.c -o ns-hooks.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pathjoin.c -o pathjoin.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pathsplit.c -o pathsplit.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c print.c -o print.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c progargs.c -o progargs.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c promises.c -o promises.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rgui_path.c -o rgui_path.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rprojroot.c -o rprojroot.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c setsyspath.c -o setsyspath.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shfile.c -o shfile.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c startup.c -o startup.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sys.c -o sys.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c thispath.c -o thispath.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c thispathdefn.c -o thispathdefn.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o this.path.so 0.o aquarootscript.o backports.o basename2.o error.o ext.o files.o ns-hooks.o pathjoin.o pathsplit.o print.o progargs.o promises.o rgui_path.o rprojroot.o setsyspath.o shfile.o startup.o sys.o thispath.o thispathdefn.o utils.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpAsSbZ0/R.INSTALL5974d6bc95562/this.path/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-this.path/00new/this.path/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (this.path) begin installing package ‘expss’ * installing *source* package ‘epiDisplay’ ... ** this is package ‘epiDisplay’ version ‘3.5.0.2’ ** package ‘epiDisplay’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (epiDisplay) begin installing package ‘psychometric’ * installing *source* package ‘finalfit’ ... ** this is package ‘finalfit’ version ‘1.1.0’ ** package ‘finalfit’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (finalfit) begin installing package ‘equatags’ * installing *source* package ‘jskm’ ... ** this is package ‘jskm’ version ‘0.5.22’ ** package ‘jskm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jskm) begin installing package ‘risks’ * installing *source* package ‘incidence’ ... ** this is package ‘incidence’ version ‘1.7.6’ ** package ‘incidence’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (incidence) begin installing package ‘extrafont’ * installing *source* package ‘tesseract’ ... ** this is package ‘tesseract’ version ‘5.2.3’ ** package ‘tesseract’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/leptonica Using PKG_LIBS=-ltesseract -larchive -lcurl Using CXX11CPP: g++-15 -E -std=gnu++11 ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9FZBXI/R.INSTALL59e97168c07c8/tesseract/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/leptonica -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/leptonica -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c tesseract.cpp -o tesseract.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o tesseract.so RcppExports.o tesseract.o -ltesseract -larchive -lcurl -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9FZBXI/R.INSTALL59e97168c07c8/tesseract/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-tesseract/00new/tesseract/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tesseract) begin installing package ‘survIDINRI’ * installing *source* package ‘staplr’ ... ** this is package ‘staplr’ version ‘3.2.2’ ** package ‘staplr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (staplr) begin installing package ‘papaja’ * installing *source* package ‘doconv’ ... ** this is package ‘doconv’ version ‘0.3.3’ ** package ‘doconv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (doconv) begin installing package ‘worcs’ * installing *source* package ‘equatags’ ... ** this is package ‘equatags’ version ‘0.2.2’ ** package ‘equatags’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (equatags) begin installing package ‘basilisk’ * installing *source* package ‘CohortCharacteristics’ ... ** this is package ‘CohortCharacteristics’ version ‘1.1.0’ ** package ‘CohortCharacteristics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortCharacteristics) begin installing package ‘bruceR’ * installing *source* package ‘extrafont’ ... ** this is package ‘extrafont’ version ‘0.20’ ** package ‘extrafont’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (extrafont) begin installing package ‘difR’ * installing *source* package ‘IncidencePrevalence’ ... ** this is package ‘IncidencePrevalence’ version ‘1.2.1’ ** package ‘IncidencePrevalence’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IncidencePrevalence) begin installing package ‘manymome’ * installing *source* package ‘psychometric’ ... ** this is package ‘psychometric’ version ‘2.4’ ** package ‘psychometric’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (psychometric) begin installing package ‘did’ * installing *source* package ‘robmed’ ... ** this is package ‘robmed’ version ‘1.2.2’ ** package ‘robmed’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (robmed) begin installing package ‘keras3’ * installing *source* package ‘jstable’ ... ** this is package ‘jstable’ version ‘1.3.19’ ** package ‘jstable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jstable) begin installing package ‘EpiEstim’ * installing *source* package ‘risks’ ... ** this is package ‘risks’ version ‘0.4.3’ ** package ‘risks’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (risks) * installing *source* package ‘fabia’ ... ** this is package ‘fabia’ version ‘2.56.0’ ** package ‘fabia’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4qvjTX/R.INSTALL5a1b6362b164d/fabia/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fabiac.c -o fabiac.o fabiac.c: In function ‘readSpfabicResult’: fabiac.c:3588:17: warning: argument 1 null where non-null expected [-Wnonnull] 3588 | fclose (pFile); | ^~~~~~~~~~~~~~ In file included from fabiac.c:2: /usr/include/stdio.h:184:12: note: in a call to function ‘fclose’ declared ‘nonnull’ 184 | extern int fclose (FILE *__stream) __nonnull ((1)); | ^~~~~~ gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fabia.so fabiac.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4qvjTX/R.INSTALL5a1b6362b164d/fabia/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fabia/00new/fabia/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fabia) * installing *source* package ‘logKDE’ ... ** this is package ‘logKDE’ version ‘0.3.3’ ** package ‘logKDE’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuJllwO/R.INSTALL5a59636a8daa3/logKDE/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c logKDE.cpp -o logKDE.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o logKDE.so RcppExports.o logKDE.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuJllwO/R.INSTALL5a59636a8daa3/logKDE/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-logKDE/00new/logKDE/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (logKDE) * installing *source* package ‘monolix2rx’ ... ** this is package ‘monolix2rx’ version ‘0.0.6’ ** package ‘monolix2rx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpvowdhq/R.INSTALL59751af98366/monolix2rx/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dataSettings.c -o dataSettings.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation.c -o equation.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c longDef.c -o longDef.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c longOutput.c -o longOutput.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mem.c -o mem.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranContent.c -o mlxtranContent.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranFileinfo.c -o mlxtranFileinfo.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranFit.c -o mlxtranFit.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranInd.c -o mlxtranInd.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranIndDefinition.c -o mlxtranIndDefinition.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranOp.c -o mlxtranOp.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranParameter.c -o mlxtranParameter.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranTask.c -o mlxtranTask.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sbuf.c -o sbuf.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shared.c -o shared.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c summaryData.c -o summaryData.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util.cpp -o util.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o monolix2rx.so dataSettings.o equation.o init.o longDef.o longOutput.o mem.o mlxtranContent.o mlxtranFileinfo.o mlxtranFit.o mlxtranInd.o mlxtranIndDefinition.o mlxtranOp.o mlxtranParameter.o mlxtranTask.o sbuf.o shared.o summaryData.o util.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpvowdhq/R.INSTALL59751af98366/monolix2rx/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-monolix2rx/00new/monolix2rx/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monolix2rx) * installing *source* package ‘survIDINRI’ ... ** this is package ‘survIDINRI’ version ‘1.1-2’ ** package ‘survIDINRI’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp81o2bW/R.INSTALL5ad235f231c75/survIDINRI/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survIDINRI_init.c -o survIDINRI_init.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c unoecdfv1.f -o unoecdfv1.o unoecdfv1.f:7:72: 7 | double precision cutoff(nc), OUTECDF(nc), score(n), weight(n), TMP1, TMP2 | 1 Warning: Line truncated at (1) [-Wline-truncation] unoecdfv1.f:13:17: 13 | TMP2=TMP2+weight(i) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] unoecdfv1.f:15:20: 15 | TMP1=TMP1+weight(i) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] unoecdfv1.f:7:70: 7 | double precision cutoff(nc), OUTECDF(nc), score(n), weight(n), TMP1, TMP2 | 1~~ Warning: Unused variable ‘tmp’ declared at (1) [-Wunused-variable] gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o survIDINRI.so survIDINRI_init.o unoecdfv1.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp81o2bW/R.INSTALL5ad235f231c75/survIDINRI/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-survIDINRI/00new/survIDINRI/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survIDINRI) * installing *source* package ‘gtExtras’ ... ** this is package ‘gtExtras’ version ‘0.6.1’ ** package ‘gtExtras’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtExtras) * installing *source* package ‘basilisk’ ... ** this is package ‘basilisk’ version ‘1.22.0’ ** package ‘basilisk’ successfully unpacked and MD5 sums checked ** using non-staged installation via StagedInstall field ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (basilisk) begin installing package ‘MOFA2’ * installing *source* package ‘lordif’ ... ** this is package ‘lordif’ version ‘0.4.2’ ** package ‘lordif’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lordif) * installing *source* package ‘Familias’ ... ** this is package ‘Familias’ version ‘2.6.3’ ** package ‘Familias’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprkEvRw/R.INSTALL59fc521de209e/Familias/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Element.cpp -o Element.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c FamInterface.cpp -o FamInterface.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c GroupOfPersons.cpp -o GroupOfPersons.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Node.cpp -o Node.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Pedigree.cpp -o Pedigree.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PedigreeList.cpp -o PedigreeList.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PedigreeSet.cpp -o PedigreeSet.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c aldata.cpp -o aldata.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c alsys.cpp -o alsys.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cutset.cpp -o cutset.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c family.cpp -o family.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c help.cpp -o help.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c main.cpp -o main.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c odds.cpp -o odds.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pater.cpp -o pater.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c person.cpp -o person.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c read.cpp -o read.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registerDynamicSymbol.c -o registerDynamicSymbol.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c special.cpp -o special.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c table.cpp -o table.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o Familias.so Element.o FamInterface.o GroupOfPersons.o Node.o Pedigree.o PedigreeList.o PedigreeSet.o aldata.o alsys.o cutset.o family.o help.o main.o odds.o pater.o person.o read.o registerDynamicSymbol.o special.o table.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprkEvRw/R.INSTALL59fc521de209e/Familias/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Familias/00new/Familias/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Familias) * installing *source* package ‘PKNCA’ ... ** this is package ‘PKNCA’ version ‘0.12.1’ ** package ‘PKNCA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PKNCA) * installing *source* package ‘papaja’ ... ** this is package ‘papaja’ version ‘0.1.4’ ** package ‘papaja’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (papaja) * installing *source* package ‘nonmem2rx’ ... ** this is package ‘nonmem2rx’ version ‘0.1.9’ ** package ‘nonmem2rx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnL1hof/R.INSTALL597486f45ebba/nonmem2rx/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c abbrec.c -o abbrec.o abbrec.c: In function ‘wprint_parsetree_abbrec’: abbrec.c:270:32: warning: value computed is not used [-Wunused-value] 270 | abbrecProcessSeq(name, pn) || | ^~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c abbrev.c -o abbrev.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c data.c -o data.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c input.c -o input.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lst.c -o lst.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mem.c -o mem.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c model.c -o model.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nonmemId.cpp -o nonmemId.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c omega.c -o omega.o omega.c: In function ‘wprint_parsetree_omega’: omega.c:372:5: warning: value computed is not used [-Wunused-value] 372 | || omegaParseNameOption(_arg_) | ^~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c records.c -o records.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sbuf.c -o sbuf.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c strncmpi.c -o strncmpi.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sub.c -o sub.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tab.c -o tab.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c theta.c -o theta.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util.cpp -o util.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c validate.c -o validate.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o nonmem2rx.so RcppExports.o abbrec.o abbrev.o data.o init.o input.o lst.o mem.o model.o nonmemId.o omega.o records.o sbuf.o strncmpi.o sub.o tab.o theta.o util.o validate.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnL1hof/R.INSTALL597486f45ebba/nonmem2rx/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-nonmem2rx/00new/nonmem2rx/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nonmem2rx) * installing *source* package ‘expss’ ... ** this is package ‘expss’ version ‘0.11.7’ ** package ‘expss’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (expss) * installing *source* package ‘worcs’ ... ** this is package ‘worcs’ version ‘0.1.19’ ** package ‘worcs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (worcs) * installing *source* package ‘manymome’ ... ** this is package ‘manymome’ version ‘0.3.1’ ** package ‘manymome’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (manymome) * installing *source* package ‘HardyWeinberg’ ... ** this is package ‘HardyWeinberg’ version ‘1.7.9’ ** package ‘HardyWeinberg’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpOA9fwX/R.INSTALL59cce19e715ea/HardyWeinberg/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c HWxChromosomal.cpp -o HWxChromosomal.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SNPHWEX.cpp -o SNPHWEX.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c support.cpp -o support.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o HardyWeinberg.so HWxChromosomal.o RcppExports.o SNPHWEX.o support.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpOA9fwX/R.INSTALL59cce19e715ea/HardyWeinberg/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-HardyWeinberg/00new/HardyWeinberg/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HardyWeinberg) * installing *source* package ‘EpiEstim’ ... ** this is package ‘EpiEstim’ version ‘2.2-5’ ** package ‘EpiEstim’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EpiEstim) begin installing package ‘EpiLPS’ * installing *source* package ‘officer’ ... ** this is package ‘officer’ version ‘0.7.2’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (officer) begin installing package ‘ftExtra’ begin installing package ‘officedown’ begin installing package ‘ztable’ begin installing package ‘mschart’ begin installing package ‘onbrand’ * installing *source* package ‘bruceR’ ... ** this is package ‘bruceR’ version ‘2025.8’ ** package ‘bruceR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bruceR) * installing *source* package ‘did’ ... ** this is package ‘did’ version ‘2.1.2’ ** package ‘did’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (did) * installing *source* package ‘evmix’ ... ** this is package ‘evmix’ version ‘2.12’ ** package ‘evmix’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (evmix) * installing *source* package ‘tern’ ... ** this is package ‘tern’ version ‘0.9.9’ ** package ‘tern’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tern) * installing *source* package ‘ftExtra’ ... ** this is package ‘ftExtra’ version ‘0.6.4’ ** package ‘ftExtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ftExtra) * installing *source* package ‘LMMsolver’ ... ** this is package ‘LMMsolver’ version ‘1.0.11’ ** package ‘LMMsolver’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp6oQssC/R.INSTALL5a5b463993543/LMMsolver/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ADcholesky.cpp -o ADcholesky.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AuxFun.cpp -o AuxFun.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SparseMatrix.cpp -o SparseMatrix.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cholesky.cpp -o cholesky.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o LMMsolver.so ADcholesky.o AuxFun.o RcppExports.o SparseMatrix.o cholesky.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp6oQssC/R.INSTALL5a5b463993543/LMMsolver/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-LMMsolver/00new/LMMsolver/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (LMMsolver) * installing *source* package ‘officedown’ ... ** this is package ‘officedown’ version ‘0.4.1’ ** package ‘officedown’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (officedown) * installing *source* package ‘mschart’ ... ** this is package ‘mschart’ version ‘0.4.1’ ** package ‘mschart’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mschart) * installing *source* package ‘shiny’ ... ** this is package ‘shiny’ version ‘1.12.0’ ** package ‘shiny’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny) begin installing package ‘toastui’ begin installing package ‘shinycustomloader’ begin installing package ‘editData’ begin installing package ‘cicerone’ * installing *source* package ‘onbrand’ ... ** this is package ‘onbrand’ version ‘1.0.7’ ** package ‘onbrand’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (onbrand) * installing *source* package ‘ztable’ ... ** this is package ‘ztable’ version ‘0.2.3’ ** package ‘ztable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ztable) * installing *source* package ‘difR’ ... ** this is package ‘difR’ version ‘6.1.0’ ** package ‘difR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (difR) * installing *source* package ‘shinycustomloader’ ... ** this is package ‘shinycustomloader’ version ‘0.9.0’ ** package ‘shinycustomloader’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinycustomloader) * installing *source* package ‘cicerone’ ... ** this is package ‘cicerone’ version ‘1.0.4’ ** package ‘cicerone’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cicerone) * installing *source* package ‘editData’ ... ** this is package ‘editData’ version ‘0.1.8’ ** package ‘editData’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (editData) * installing *source* package ‘toastui’ ... ** this is package ‘toastui’ version ‘0.4.0’ ** package ‘toastui’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (toastui) begin installing package ‘datamods’ * installing *source* package ‘MOFA2’ ... ** this is package ‘MOFA2’ version ‘1.20.0’ ** package ‘MOFA2’ successfully unpacked and MD5 sums checked ** using non-staged installation via StagedInstall field ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘rownames’ from package ‘base’ in package ‘MOFA2’ Creating a generic function for ‘colnames’ from package ‘base’ in package ‘MOFA2’ Creating a generic function for ‘nrow’ from package ‘base’ in package ‘MOFA2’ Creating a generic function for ‘ncol’ from package ‘base’ in package ‘MOFA2’ Creating a generic function for ‘rownames<-’ from package ‘base’ in package ‘MOFA2’ Creating a generic function for ‘colnames<-’ from package ‘base’ in package ‘MOFA2’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (MOFA2) * installing *source* package ‘datamods’ ... ** this is package ‘datamods’ version ‘1.5.3’ ** package ‘datamods’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (datamods) * installing *source* package ‘keras3’ ... ** this is package ‘keras3’ version ‘1.4.0’ ** package ‘keras3’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (keras3) * installing *source* package ‘EpiLPS’ ... ** this is package ‘EpiLPS’ version ‘1.3.0’ ** package ‘EpiLPS’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNty332/R.INSTALL5b34937042fba/EpiLPS/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c KerLaplace.cpp -o KerLaplace.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c KerLaplaceIncub.cpp -o KerLaplaceIncub.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c KerLaplaceNowcast.cpp -o KerLaplaceNowcast.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c KerMVN.cpp -o KerMVN.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c KerRpostmap.cpp -o KerRpostmap.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c KerRpostmcmc.cpp -o KerRpostmcmc.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c KercubicBspline.cpp -o KercubicBspline.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Kerhyperoptim.cpp -o Kerhyperoptim.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o EpiLPS.so KerLaplace.o KerLaplaceIncub.o KerLaplaceNowcast.o KerMVN.o KerRpostmap.o KerRpostmcmc.o KercubicBspline.o Kerhyperoptim.o RcppExports.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNty332/R.INSTALL5b34937042fba/EpiLPS/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-EpiLPS/00new/EpiLPS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EpiLPS) * installing *source* package ‘nlmixr2est’ ... ** this is package ‘nlmixr2est’ version ‘5.0.2’ ** package ‘nlmixr2est’ successfully unpacked and MD5 sums checked ** using staged installation --------[begin src/Makevars]-------- # -*- mode: makefile-gmake -*- ARMA=/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include BH=/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include RCPP=/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include RXP=/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include CXX_STD = CXX17 PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) $(SHLIB_OPENMP_CXXFLAGS) PKG_CXXFLAGS = -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"$(BH)" -I"$(RCPP)" -I"$(ARMA)" -I"$(RXP)" $(SHLIB_OPENMP_CXXFLAGS) -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT SHLIB_LDFLAGS = $(SHLIB_CXXLDFLAGS) SHLIB_LD = $(SHLIB_CXXLD) SOURCES_C = init.c rprintf.c merge3.c lbfgsR.c utilc.c SOURCES_CPP = uninformativeEtas.cpp nlm.cpp filterNormalLike.cpp inner.cpp shi21.cpp nearPD.cpp censEst.cpp saem.cpp expandNlme.cpp npde.cpp shrink.cpp ires.cpp res.cpp cwres.cpp censResid.cpp cholse.cpp neldermead.cpp resid.cpp slice.cpp RcppExportMod.cpp RcppExports.cpp rxcmp.cpp OBJECTS = $(SOURCES_CPP:.cpp=.o) $(SOURCES_C:.c=.o) all: $(SHLIB) $(SHLIB): $(OBJECTS) --------[end src/Makevars]-------- ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVWq0QX/R.INSTALL5a848b006876/nlmixr2est/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c uninformativeEtas.cpp -o uninformativeEtas.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from uninformativeEtas.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c nlm.cpp -o nlm.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from nlm.cpp:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ nlm.cpp: In function ‘arma::vec nlmSolveF(arma::vec&)’: nlm.cpp:393:7: warning: unused variable ‘cores’ [-Wunused-variable] 393 | int cores = getOpCores(op); | ^~~~~ nlm.cpp: In function ‘arma::mat nlmSolveGrad(arma::vec&)’: nlm.cpp:519:7: warning: unused variable ‘cores’ [-Wunused-variable] 519 | int cores = getOpCores(op); | ^~~~~ nlm.cpp: In function ‘Rcpp::NumericVector solveGradNls(arma::vec&, int)’: nlm.cpp:602:12: warning: unused variable ‘llik’ [-Wunused-variable] 602 | double llik; | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c filterNormalLike.cpp -o filterNormalLike.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from filterNormalLike.cpp:10: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c inner.cpp -o inner.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from inner.cpp:5: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ inner.cpp: In function ‘void parHistData(Rcpp::Environment, bool)’: inner.cpp:31:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 31 | #define min2( a , b ) ( (a) < (b) ? (a) : (b) ) | ~~~~^~~~~ inner.cpp:6008:23: note: in expansion of macro ‘min2’ 6008 | for (i = 0; i < min2(op_focei.npars+1, vals.n_cols); i++){ | ^~~~ inner.cpp:6008:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long long unsigned int’ [-Wsign-compare] 6008 | for (i = 0; i < min2(op_focei.npars+1, vals.n_cols); i++){ | ^ inner.cpp: In function ‘Rcpp::List nlmixr2Gill83_(Rcpp::Function, Rcpp::NumericVector, Rcpp::Environment, Rcpp::LogicalVector, double, int, double, double, bool)’: inner.cpp:4469:13: warning: ‘gillF’ may be used uninitialized [-Wmaybe-uninitialized] 4469 | fN[i] = gillF; inner.cpp:4462:10: note: ‘gillF’ was declared here 4462 | double gillF; | ^~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c shi21.cpp -o shi21.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from shi21.cpp:11: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c nearPD.cpp -o nearPD.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from nearPD.cpp:5: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c censEst.cpp -o censEst.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c saem.cpp -o saem.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from saem.cpp:8: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c expandNlme.cpp -o expandNlme.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c npde.cpp -o npde.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from npde.h:7, from npde.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ npde.cpp: In function ‘void handleCensNpdeCdf(calcNpdeInfoId&, arma::Col&, arma::vec&, int&, bool&, unsigned int, arma::vec&, arma::vec&, unsigned int&, bool&)’: npde.cpp:129:15: warning: variable ‘hi’ set but not used [-Wunused-but-set-variable] 129 | double low, hi, low2, hi2; | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c shrink.cpp -o shrink.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from shrink.h:5, from shrink.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c ires.cpp -o ires.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from res.h:4, from ires.h:4, from ires.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c res.cpp -o res.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from res.h:4, from res.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/iterator/iterator_categories.hpp:16, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/iterator/iterator_facade.hpp:13, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/iterator_range_core.hpp:27, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/iterator_range.hpp:13, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/as_literal.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/algorithm/string/trim.hpp:19, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/algorithm/string.hpp:19, from res.cpp:3: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/bind/mem_fn.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mem_fn.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/function/function_template.hpp:16, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/function.hpp:16, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/algorithm/string/find_iterator.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/algorithm/string/iter_find.hpp:27, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/algorithm/string/split.hpp:16, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/algorithm/string.hpp:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/current/armadillo:38, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:32, from armahead.h:12: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ res.cpp: In function ‘void calculateDfFull(arma::Col&, arma::mat&, Rcpp::List&, int&, unsigned int&)’: res.cpp:10:7: warning: unused variable ‘idSize’ [-Wunused-variable] 10 | int idSize = ID.size(); | ^~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c cwres.cpp -o cwres.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from res.h:4, from cwres.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c censResid.cpp -o censResid.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from censResid.h:3, from censResid.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c cholse.cpp -o cholse.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from cholse.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c neldermead.cpp -o neldermead.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c resid.cpp -o resid.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from resid.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c slice.cpp -o slice.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExportMod.cpp -o RcppExportMod.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from ../inst/include/nlmixr2est_RcppExports.h:8, from ../inst/include/nlmixr2est.h:7, from RcppExports.cpp:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include" -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -c rxcmp.cpp -o rxcmp.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from armahead.h:13, from rxcmp.cpp:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rprintf.c -o rprintf.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c merge3.c -o merge3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lbfgsR.c -o lbfgsR.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/n1qn1/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lbfgsb3c/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/lotri/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utilc.c -o utilc.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o nlmixr2est.so uninformativeEtas.o nlm.o filterNormalLike.o inner.o shi21.o nearPD.o censEst.o saem.o expandNlme.o npde.o shrink.o ires.o res.o cwres.o censResid.o cholse.o neldermead.o resid.o slice.o RcppExportMod.o RcppExports.o rxcmp.o init.o rprintf.o merge3.o lbfgsR.o utilc.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVWq0QX/R.INSTALL5a848b006876/nlmixr2est/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-nlmixr2est/00new/nlmixr2est/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlmixr2est) begin installing package ‘nlmixr2extra’ * installing *source* package ‘nlmixr2extra’ ... ** this is package ‘nlmixr2extra’ version ‘5.0.0’ ** package ‘nlmixr2extra’ successfully unpacked and MD5 sums checked ** using staged installation R Under development (unstable) (2025-12-02 r89085) -- "Unsuffered Consequences" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. R> if (!dir.exists("data")) { + dir.create("data") + } R> R> .in <- suppressWarnings(readLines("src/Makevars.in")) R> if (.Platform$OS.type == "windows") { + .makevars <- file("src/Makevars.win", "wb") + .i <- "I" + } else { + .makevars <- file("src/Makevars", "wb") + if (any(grepl("Pop!_OS", utils::osVersion, fixed=TRUE))) { + .i <- "isystem" + } else { + .i <- "I" + } + } R> R> writeLines(gsub("@ISYSTEM@", .i, .in), + .makevars) R> close(.makevars) R> > proc.time() user system elapsed 0.136 0.040 0.161 --------[begin src/Makevars]-------- ## -*- mode: makefile; -*- PKG_CXXFLAGS = $(SHLIB_OPENMP_CXXFLAGS) -DARMA_USE_CXX11 PKG_LIBS = $(SHLIB_OPENMP_CXXFLAGS) $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) --------[end src/Makevars]-------- ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDMnByM/R.INSTALL5bac742df5e72/nlmixr2extra/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CXX11 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CXX11 -fpic -g -O2 -Wall -pedantic -mtune=native -c preCondInv.cpp -o preCondInv.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o nlmixr2extra.so RcppExports.o init.o preCondInv.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDMnByM/R.INSTALL5bac742df5e72/nlmixr2extra/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-nlmixr2extra/00new/nlmixr2extra/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlmixr2extra) begin installing package ‘nlmixr2plot’ * installing *source* package ‘nlmixr2plot’ ... ** this is package ‘nlmixr2plot’ version ‘5.0.0’ ** package ‘nlmixr2plot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlmixr2plot) begin installing package ‘babelmixr2’ * installing *source* package ‘babelmixr2’ ... ** this is package ‘babelmixr2’ version ‘0.1.11’ ** package ‘babelmixr2’ successfully unpacked and MD5 sums checked ** using staged installation --------[begin src/Makevars]-------- # -*- mode: makefile-gmake -*- ARMA=`"$(R_HOME)/bin$(R_ARCH_BIN)/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'` RCPP=`"$(R_HOME)/bin$(R_ARCH_BIN)/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'` EG=`"$(R_HOME)/bin$(R_ARCH_BIN)/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'` RXAPI=`"$(R_HOME)/bin$(R_ARCH_BIN)/Rscript" -e 'cat(length(rxode2::.rxode2ptrs()))'` PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) PKG_CXXFLAGS = -Id -I"$(EG)" -I"$(RCPP)" -I"$(ARMA)" -DRXAPI=$(RXAPI) SHLIB_LDFLAGS = $(SHLIB_CXXLDFLAGS) SHLIB_LD = $(SHLIB_CXXLD) --------[end src/Makevars]-------- ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpoIgJNI/R.INSTALL5bc256fb5f482/babelmixr2/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'`" -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'`" -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -DRXAPI=`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(length(rxode2::.rxode2ptrs()))'` -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'`" -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'`" -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -DRXAPI=`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(length(rxode2::.rxode2ptrs()))'` -fpic -g -O2 -Wall -pedantic -mtune=native -c classicReverse.cpp -o classicReverse.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'`" -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'`" -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -DRXAPI=`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(length(rxode2::.rxode2ptrs()))'` -fpic -g -O2 -Wall -pedantic -mtune=native -c poped.cpp -o poped.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2ptr.h:4, from poped.cpp:13: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Id -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'`" -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'`" -I"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -DRXAPI=`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(length(rxode2::.rxode2ptrs()))'` -fpic -g -O2 -Wall -pedantic -mtune=native -c transform.cpp -o transform.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2_RcppExports.h:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rxode2/include/rxode2.h:44, from transform.cpp:12: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o babelmixr2.so RcppExports.o classicReverse.o init.o poped.o transform.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpoIgJNI/R.INSTALL5bc256fb5f482/babelmixr2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-babelmixr2/00new/babelmixr2/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (babelmixr2) * installing *source* package ‘xgboost’ ... ** this is package ‘xgboost’ version ‘3.1.2.1’ ** package ‘xgboost’ successfully unpacked and MD5 sums checked ** using staged installation configure: Checking if/where backtrace is available checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++-15 -std=gnu++17 accepts -g... yes checking for g++-15 -std=gnu++17 option to enable C++11 features... none needed checking for backtrace in -lexecinfo... no checking for backtrace... yes configure: Checking whether fopen64 is available checking for fopen64... yes configure: Endian detection checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes configure: Checking system endianness as USE_LITTLE_ENDIAN is unset checking whether byte ordering is bigendian... no using little endian configure: Checking for prefetch builtin Doesn't have __builtin_prefetch configure: Checking for mm_prefetch Doesn't have _mm_prefetch configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/config.h config.status: src/config.h is unchanged ** libs Makevars:22: -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 Makevars:22: -DXGBOOST_MM_PREFETCH_PRESENT=1 Makevars:22: -DXGBOOST_STRICT_R_MODE=1 Makevars:22: -DDMLC_LOG_BEFORE_THROW=0 Makevars:22: -DDMLC_ENABLE_STD_THREAD=1 Makevars:22: -DDMLC_DISABLE_STDIN=1 Makevars:22: -DDMLC_LOG_CUSTOMIZE=1 using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp6f3dC4/R.INSTALL5a70a8cfad68/xgboost/src' Makevars:22: -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 Makevars:22: -DXGBOOST_MM_PREFETCH_PRESENT=1 Makevars:22: -DXGBOOST_STRICT_R_MODE=1 Makevars:22: -DDMLC_LOG_BEFORE_THROW=0 Makevars:22: -DDMLC_ENABLE_STD_THREAD=1 Makevars:22: -DDMLC_DISABLE_STDIN=1 Makevars:22: -DDMLC_LOG_CUSTOMIZE=1 g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xgboost_R.cc -o xgboost_R.o In file included from ./dmlc-core/include/dmlc/common.h:15, from xgboost_R.cc:4: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: ./dmlc-core/include/../../src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = unsigned int; Y = int]’: xgboost_R.cc:1350:9: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: ./dmlc-core/include/../../src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 1; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/../../src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 1; bool allow_mask = true; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ ./dmlc-core/include/../../src/data/array_interface.h:454:13: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::Json&) [with int D = 1; bool allow_mask = true]’ 454 | this->Initialize(get(array)); | ~~~~~~^~~~~~~~~~ ./dmlc-core/include/../../src/data/array_interface.h:467:75: required from ‘xgboost::ArrayInterface::ArrayInterface(xgboost::StringView) [with int D = 1; bool allow_mask = true]’ 467 | explicit ArrayInterface(StringView str) : ArrayInterface{Json::Load(str)} {} | ^ xgboost_R.cc:239:66: required from here 239 | xgboost::ArrayInterface<1> array{xgboost::StringView{array_str}}; | ^ ./dmlc-core/include/dmlc/./logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xgboost_custom.cc -o xgboost_custom.o In file included from ./include/xgboost/logging.h:11, from xgboost_custom.cc:5: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: ./dmlc-core/include/../../src/common/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/metric/metric.cc -o src/metric/metric.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from src/metric/metric.cc:6: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/metric/elementwise_metric.cc -o src/metric/elementwise_metric.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from src/metric/elementwise_metric.cu:9, from src/metric/elementwise_metric.cc:7: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/elementwise_metric.cu:466:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/metric/multiclass_metric.cc -o src/metric/multiclass_metric.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from ./include/xgboost/metric.h:10, from src/metric/multiclass_metric.cu:7, from src/metric/multiclass_metric.cc:7: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/metric/rank_metric.cc -o src/metric/rank_metric.o In file included from ./include/xgboost/logging.h:11, from src/metric/../common/common.h:18, from src/metric/rank_metric.h:8, from src/metric/rank_metric.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/metric/../common/ranking_utils.h:221:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/metric/auc.cc -o src/metric/auc.o In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/json.h:8, from src/metric/../collective/communicator-inl.h:7, from src/metric/auc.h:11, from src/metric/auc.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/auc.cc:353:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/auc.cc:218:3: required from ‘std::pair xgboost::metric::RankingAUC(const xgboost::Context*, const std::vector >&, const xgboost::MetaInfo&, int32_t) [with bool is_roc = true; int32_t = int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/metric/auc.cc:344:27: required from here 344 | RankingAUC(ctx_, predts.ConstHostVector(), info, n_threads); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/metric/survival_metric.cc -o src/metric/survival_metric.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from src/metric/survival_metric.cu:8, from src/metric/survival_metric.cc:10: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/metric/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/objective.cc -o src/objective/objective.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/regression_obj.cc -o src/objective/regression_obj.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from src/objective/regression_obj.cc:7: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/multiclass_obj.cc -o src/objective/multiclass_obj.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from src/objective/multiclass_obj.cc:7: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/multiclass_obj.cu:45:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:199:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 199 | DEFINE_CHECK_FUNC(_LE, <=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = long int]’: src/objective/multiclass_obj.cu:209:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const long int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/lambdarank_obj.cc -o src/objective/lambdarank_obj.o In file included from ./dmlc-core/include/dmlc/common.h:15, from src/objective/../common/numeric.h:7, from src/objective/../common/algorithm.h:12, from src/objective/lambdarank_obj.h:25, from src/objective/lambdarank_obj.cc:4: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/objective/../common/ranking_utils.h:221:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/lambdarank_obj.cc:489:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/lambdarank_obj.cc:281:5: required from ‘xgboost::bst_target_t xgboost::obj::LambdaRankObj::Targets(const xgboost::MetaInfo&) const [with Loss = xgboost::obj::LambdaRankMAP; Cache = xgboost::ltr::MAPCache; xgboost::bst_target_t = unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/objective/lambdarank_obj.cc:492:52: required from here 492 | out_gpair->Reshape(info.num_row_, this->Targets(info)); | ~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:199:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 199 | DEFINE_CHECK_FUNC(_LE, <=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/hinge.cc -o src/objective/hinge.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/aft_obj.cc -o src/objective/aft_obj.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/adaptive.cc -o src/objective/adaptive.o In file included from ./include/xgboost/logging.h:11, from src/objective/../collective/../data/../common/common.h:18, from src/objective/../collective/../data/../common/bitfield.h:21, from src/objective/../collective/../data/array_interface.h:18, from src/objective/../collective/allreduce.h:11, from src/objective/../collective/aggregator.h:13, from src/objective/adaptive.h:11, from src/objective/adaptive.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/adaptive.cc:65:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:198:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 198 | DEFINE_CHECK_FUNC(_GT, >) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long int; Y = long unsigned int]’: src/objective/adaptive.cc:72:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/adaptive.cc:112:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/init_estimation.cc -o src/objective/init_estimation.o In file included from ./dmlc-core/include/dmlc/io.h:15, from ./include/xgboost/data.h:11, from src/objective/init_estimation.h:6, from src/objective/init_estimation.cc:4: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/init_estimation.cc:50:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/objective/quantile_obj.cc -o src/objective/quantile_obj.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from src/objective/quantile_obj.cc:7: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/objective/quantile_obj.cu:63:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/gbm/gbm.cc -o src/gbm/gbm.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/gbm/gbtree.cc -o src/gbm/gbtree.o In file included from ./include/xgboost/logging.h:11, from src/gbm/../common/timer.h:5, from src/gbm/gbtree.h:20, from src/gbm/gbtree.cc:8: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/gbm/gbtree_model.h:118:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LE(const X&, const Y&) [with X = int; Y = long unsigned int]’: src/gbm/gbtree.h:232:9: required from ‘xgboost::gbm::GBTree::FeatureScore(const std::string&, xgboost::common::Span, std::vector*, std::vector >*) const:: [with auto:53 = xgboost::gbm::GBTree::FeatureScore(const std::string&, xgboost::common::Span, std::vector*, std::vector >*) const::]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/gbm/gbtree.h:245:16: required from here 245 | add_score([&](auto const&, bst_node_t, bst_feature_t split) { | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 | gain_map[split] = split_counts[split]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 | }); | ~~ ./dmlc-core/include/dmlc/logging.h:199:24: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘const long unsigned int’ [-Wsign-compare] 199 | DEFINE_CHECK_FUNC(_LE, <=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/gbm/../data/proxy_dmatrix.h:159:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = int; Y = long unsigned int]’: src/gbm/gbtree.cc:186:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘const long unsigned int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/gbm/gbtree.cc:225:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = unsigned int; Y = int]’: src/gbm/gbtree.cc:495:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = int; Y = unsigned int]’: src/gbm/gbtree.cc:744:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘const unsigned int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/gbm/../common/../collective/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/gbm/../common/../collective/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/gbm/../common/../collective/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/gbm/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/gbm/gbtree_model.cc -o src/gbm/gbtree_model.o In file included from ./dmlc-core/include/dmlc/io.h:15, from src/gbm/gbtree_model.h:9, from src/gbm/gbtree_model.cc:4: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/gbm/gbtree_model.h:118:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/gbm/gblinear.cc -o src/gbm/gblinear.o In file included from ./dmlc-core/include/dmlc/./json.h:24, from ./dmlc-core/include/dmlc/parameter.h:26, from src/gbm/gblinear.cc:9: ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = unsigned int; Y = int]’: src/gbm/gblinear.cc:52:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/././logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/gbm/gblinear_model.cc -o src/gbm/gblinear_model.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/adapter.cc -o src/data/adapter.o In file included from ./dmlc-core/include/dmlc/./io.h:15, from ./dmlc-core/include/dmlc/data.h:14, from src/data/adapter.h:7, from src/data/adapter.cc:4: ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/././logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/columnar.h:44:3: required from ‘auto xgboost::data::GetArrowNames(const xgboost::JsonObject::Map&, std::vector*) [with CategoricalIndex = std::variant, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span >; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/columnar.h:102:29: required from ‘std::size_t xgboost::data::GetArrowDictionary(const xgboost::Json&, std::vector*, std::vector >*, std::size_t*, xgboost::bst_idx_t*) [with CategoricalIndex = std::variant, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span, xgboost::common::Span >; bool allow_mask = true; std::size_t = long unsigned int; xgboost::bst_idx_t = long unsigned int]’ 102 | auto names = GetArrowNames(get(tup[0]), p_cat_columns); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/data/adapter.cc:55:31: required from here 55 | GetArrowDictionary(jcol, &this->cats_, &this->columns_, &this->n_bytes_, &n_samples); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./dmlc-core/include/dmlc/././logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/././logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/array_interface.cc -o src/data/array_interface.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/../common/bitfield.h:21, from src/data/array_interface.h:18, from src/data/array_interface.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/cat_container.cc -o src/data/cat_container.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/../common/bitfield.h:21, from src/data/../common/categorical.h:8, from src/data/cat_container.h:14, from src/data/cat_container.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/simple_dmatrix.cc -o src/data/simple_dmatrix.o In file included from ./dmlc-core/include/dmlc/io.h:15, from ./include/xgboost/data.h:11, from src/data/simple_dmatrix.h:11, from src/data/simple_dmatrix.cc:7: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/gradient_index.h:105:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../collective/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/../collective/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/../collective/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/./logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/data.cc -o src/data/data.o In file included from ./dmlc-core/include/dmlc/io.h:15, from ./include/xgboost/data.h:11, from src/data/data.cc:5: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = int; Y = long unsigned int]’: src/data/data.cc:273:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘const long unsigned int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/data.cc:749:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/data/../data/sparse_page_source.h:416:5: required from ‘void xgboost::data::SparsePageSourceImpl::EndIter() [with S = xgboost::SparsePage; FormatStreamPolicy = xgboost::data::DefaultFormatStreamPolicy]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/../data/sparse_page_source.h:506:20: required from here 506 | this->EndIter(); | ~~~~~~~~~~~~~^~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../collective/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/../collective/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/../collective/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/./logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/sparse_page_raw_format.cc -o src/data/sparse_page_raw_format.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from src/data/sparse_page_raw_format.cc:6: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/io.h:451:5: required from ‘std::enable_if_t<((bool)is_pod_v), bool> xgboost::common::AlignedResourceReadStream::Consume(T*) [with T = long unsigned int; std::enable_if_t<((bool)is_pod_v), bool> = bool]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/../common/io.h:474:25: required from ‘std::enable_if_t<((bool)is_pod_v), bool> xgboost::common::AlignedResourceReadStream::Read(T*) [with T = long unsigned int; std::enable_if_t<((bool)is_pod_v), bool> = bool]’ 474 | return this->Consume(out); | ~~~~~~~~~~~~~^~~~~ src/data/../common/ref_resource_view.h:116:16: required from ‘bool xgboost::common::ReadVec(AlignedResourceReadStream*, Vec*) [with Vec = std::vector]’ 116 | if (!fi->Read(&n)) { | ~~~~~~~~^~~~ src/data/sparse_page_raw_format.cc:22:25: required from ‘bool xgboost::data::SparsePageRawFormat::Read(T*, xgboost::common::AlignedResourceReadStream*) [with T = xgboost::SortedCSCPage]’ 22 | if (!common::ReadVec(fi, &offset_vec)) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ src/data/sparse_page_raw_format.cc:20:8: required from here 20 | bool Read(T* page, common::AlignedResourceReadStream* fi) override { | ^~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/ellpack_page.cc -o src/data/ellpack_page.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/../common/bitfield.h:21, from src/data/../common/categorical.h:8, from src/data/../common/hist_util.h:17, from src/data/ellpack_page.h:9, from src/data/ellpack_page.cc:6: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/quantile.h:175:7: required from ‘void xgboost::common::WQSummary::CopyFrom(const xgboost::common::WQSummary&) [with DType = float; RType = float]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/../common/quantile.h:609:28: required from ‘void xgboost::common::QuantileSketchTemplate::PushTemp() [with DType = float; RType = float; TSummary = xgboost::common::WXQSummary]’ 609 | level[l].CopyFrom(temp); break; | ~~~~~~~~~~~~~~~~~^~~~~~ src/data/../common/quantile.h:990:21: required from here 990 | sketch->PushTemp(); | ~~~~~~~~~~~~~~~~^~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/file_iterator.cc -o src/data/file_iterator.o In file included from ./dmlc-core/include/dmlc/./io.h:15, from ./dmlc-core/include/dmlc/data.h:14, from src/data/file_iterator.h:12, from src/data/file_iterator.cc:4: ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/file_iterator.cc:22:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/././logging.h:199:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 199 | DEFINE_CHECK_FUNC(_LE, <=) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/file_iterator.cc:27:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/././logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/gradient_index.cc -o src/data/gradient_index.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/../common/bitfield.h:21, from src/data/../common/categorical.h:8, from src/data/gradient_index.h:16, from src/data/gradient_index.cc:5: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/gradient_index.h:105:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/../common/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/../common/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/../common/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/gradient_index_page_source.cc -o src/data/gradient_index_page_source.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/../common/bitfield.h:21, from src/data/../common/categorical.h:8, from src/data/../common/hist_util.h:17, from src/data/gradient_index_page_source.h:13, from src/data/gradient_index_page_source.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/gradient_index.h:105:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/gradient_index_page_source.cc:26:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = unsigned int; Y = int]’: src/data/gradient_index_page_source.cc:35:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/data/sparse_page_source.h:416:5: required from ‘void xgboost::data::SparsePageSourceImpl::EndIter() [with S = xgboost::SparsePage; FormatStreamPolicy = xgboost::data::DefaultFormatStreamPolicy]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/sparse_page_source.h:506:20: required from here 506 | this->EndIter(); | ~~~~~~~~~~~~~^~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/gradient_index_format.cc -o src/data/gradient_index_format.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/../common/bitfield.h:21, from src/data/../common/categorical.h:8, from src/data/../common/hist_util.h:17, from src/data/gradient_index_format.h:9, from src/data/gradient_index_format.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/gradient_index.h:105:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/validation.cc -o src/data/validation.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/sparse_page_dmatrix.cc -o src/data/sparse_page_dmatrix.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/../common/compressed_iterator.h:13, from src/data/ellpack_page_source.h:15, from src/data/sparse_page_dmatrix.h:16, from src/data/sparse_page_dmatrix.cc:8: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/sparse_page_dmatrix.cc:134:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/data/sparse_page_source.h:416:5: required from ‘void xgboost::data::SparsePageSourceImpl::EndIter() [with S = xgboost::SparsePage; FormatStreamPolicy = xgboost::data::DefaultFormatStreamPolicy]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/sparse_page_source.h:506:20: required from here 506 | this->EndIter(); | ~~~~~~~~~~~~~^~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/sparse_page_source.cc -o src/data/sparse_page_source.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/sparse_page_source.h:21, from src/data/sparse_page_source.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/proxy_dmatrix.h:159:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/data/sparse_page_source.h:416:5: required from ‘void xgboost::data::SparsePageSourceImpl::EndIter() [with S = xgboost::SparsePage; FormatStreamPolicy = xgboost::data::DefaultFormatStreamPolicy]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/sparse_page_source.h:506:20: required from here 506 | this->EndIter(); | ~~~~~~~~~~~~~^~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/extmem_quantile_dmatrix.cc -o src/data/extmem_quantile_dmatrix.o In file included from ./include/xgboost/logging.h:11, from src/data/../common/common.h:18, from src/data/../common/compressed_iterator.h:13, from src/data/ellpack_page_source.h:15, from src/data/extmem_quantile_dmatrix.h:11, from src/data/extmem_quantile_dmatrix.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/data/sparse_page_source.h:416:5: required from ‘void xgboost::data::SparsePageSourceImpl::EndIter() [with S = xgboost::SparsePage; FormatStreamPolicy = xgboost::data::DefaultFormatStreamPolicy]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/sparse_page_source.h:506:20: required from here 506 | this->EndIter(); | ~~~~~~~~~~~~~^~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/quantile_dmatrix.cc -o src/data/quantile_dmatrix.o In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/string_view.h:6, from src/data/../common/nvtx_utils.h:10, from src/data/proxy_dmatrix.h:15, from src/data/quantile_dmatrix.h:9, from src/data/quantile_dmatrix.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/proxy_dmatrix.h:159:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = int; Y = long unsigned int]’: src/data/quantile_dmatrix.cc:135:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘const long unsigned int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/batch_utils.cc -o src/data/batch_utils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/proxy_dmatrix.cc -o src/data/proxy_dmatrix.o In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/string_view.h:6, from src/data/../common/nvtx_utils.h:10, from src/data/proxy_dmatrix.h:15, from src/data/proxy_dmatrix.cc:5: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/proxy_dmatrix.h:159:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/data/iterative_dmatrix.cc -o src/data/iterative_dmatrix.o In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/string_view.h:6, from src/data/../common/nvtx_utils.h:10, from src/data/proxy_dmatrix.h:15, from src/data/quantile_dmatrix.h:9, from src/data/iterative_dmatrix.h:12, from src/data/iterative_dmatrix.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/proxy_dmatrix.h:159:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/predictor/predictor.cc -o src/predictor/predictor.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from ./include/xgboost/predictor.h:8, from src/predictor/predictor.cc:4: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/predictor/../gbm/gbtree_model.h:118:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/predictor/predictor.cc:58:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/predictor/cpu_predictor.cc -o src/predictor/cpu_predictor.o In file included from ./include/xgboost/logging.h:11, from src/predictor/../collective/../data/../common/common.h:18, from src/predictor/../collective/../data/../common/bitfield.h:21, from src/predictor/../collective/../data/array_interface.h:18, from src/predictor/../collective/allreduce.h:11, from src/predictor/cpu_predictor.cc:12: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/predictor/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/predictor/../common/../data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/predictor/../collective/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/predictor/../collective/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/predictor/../collective/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/predictor/../common/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/predictor/cpu_predictor.cc:926:5: required from ‘void xgboost::predictor::CPUPredictor::PredictContributionKernel(DataView, const xgboost::MetaInfo&, const xgboost::gbm::GBTreeModel&, const std::vector >*, std::vector > >*, xgboost::predictor::{anonymous}::ThreadTmp<1>*, std::vector >*, xgboost::bst_tree_t, bool, int, unsigned int) const [with DataView = xgboost::predictor::{anonymous}::GHistIndexMatrixView; xgboost::bst_tree_t = int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/predictor/cpu_predictor.cc:1109:9: required from ‘xgboost::predictor::CPUPredictor::PredictContribution(xgboost::DMatrix*, xgboost::HostDeviceVector*, const xgboost::gbm::GBTreeModel&, xgboost::bst_tree_t, const std::vector >*, bool, int, unsigned int) const:::: [with auto:88 = xgboost::predictor::{anonymous}::GHistIndexMatrixView]’ 1109 | PredictContributionKernel(batch, info, model, tree_weights, &mean_values, &feat_vecs, | ^~~~~~~~~~~~~~~~~~~~~~~~~ src/predictor/cpu_predictor.cc:459:11: required from ‘void xgboost::predictor::{anonymous}::LaunchConfig::ForEachBatch(Fn&&) [with Fn = xgboost::predictor::CPUPredictor::PredictContribution(xgboost::DMatrix*, xgboost::HostDeviceVector*, const xgboost::gbm::GBTreeModel&, xgboost::bst_tree_t, const std::vector >*, bool, int, unsigned int) const::::; Args = {xgboost::predictor::{anonymous}::BlockPolicy, xgboost::predictor::{anonymous}::EncAccessorPolicy}]’ 459 | fn(GHistIndexMatrixView{page, acc, ft}); | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/predictor/cpu_predictor.cc:1108:26: required from ‘xgboost::predictor::CPUPredictor::PredictContribution(xgboost::DMatrix*, xgboost::HostDeviceVector*, const xgboost::gbm::GBTreeModel&, xgboost::bst_tree_t, const std::vector >*, bool, int, unsigned int) const:: [with auto:87 = xgboost::predictor::{anonymous}::LaunchConfig]’ 1108 | policy.ForEachBatch([&](auto &&batch) { | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ 1109 | PredictContributionKernel(batch, info, model, tree_weights, &mean_values, &feat_vecs, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1110 | &contribs, ntree_limit, approximate, condition, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1111 | condition_feature); | ~~~~~~~~~~~~~~~~~~~ 1112 | }); | ~~ src/predictor/cpu_predictor.cc:485:9: required from ‘void xgboost::predictor::{anonymous}::LaunchPredict(const xgboost::Context*, xgboost::DMatrix*, const xgboost::gbm::GBTreeModel&, Fn&&, NeedRecode&&) [with Fn = xgboost::predictor::CPUPredictor::PredictContribution(xgboost::DMatrix*, xgboost::HostDeviceVector*, const xgboost::gbm::GBTreeModel&, xgboost::bst_tree_t, const std::vector >*, bool, int, unsigned int) const::&; NeedRecode = LaunchPredict*, const xgboost::gbm::GBTreeModel&, xgboost::bst_tree_t, const std::vector >*, bool, int, unsigned int) const:: >(const xgboost::Context*, xgboost::DMatrix*, const xgboost::gbm::GBTreeModel&, xgboost::predictor::CPUPredictor::PredictContribution(xgboost::DMatrix*, xgboost::HostDeviceVector*, const xgboost::gbm::GBTreeModel&, xgboost::bst_tree_t, const std::vector >*, bool, int, unsigned int) const::&&)::]’ 485 | fn(Policy{ctx, p_fmat, model}); | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/predictor/cpu_predictor.cc:503:16: required from ‘void xgboost::predictor::{anonymous}::LaunchPredict(const xgboost::Context*, xgboost::DMatrix*, const xgboost::gbm::GBTreeModel&, Fn&&) [with Fn = xgboost::predictor::CPUPredictor::PredictContribution(xgboost::DMatrix*, xgboost::HostDeviceVector*, const xgboost::gbm::GBTreeModel&, xgboost::bst_tree_t, const std::vector >*, bool, int, unsigned int) const::]’ 503 | LaunchPredict(ctx, p_fmat, model, fn, | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 504 | [](DMatrix const *p_fmat) { return p_fmat->Cats()->NeedRecode(); }); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/predictor/cpu_predictor.cc:1107:18: required from here 1107 | LaunchPredict(this->ctx_, p_fmat, model, [&](auto &&policy) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 | policy.ForEachBatch([&](auto &&batch) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1109 | PredictContributionKernel(batch, info, model, tree_weights, &mean_values, &feat_vecs, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1110 | &contribs, ntree_limit, approximate, condition, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1111 | condition_feature); | ~~~~~~~~~~~~~~~~~~~ 1112 | }); | ~~~ 1113 | }); | ~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/predictor/treeshap.cc -o src/predictor/treeshap.o In file included from ./dmlc-core/include/dmlc/io.h:15, from ./include/xgboost/data.h:11, from ./include/xgboost/tree_model.h:11, from src/predictor/treeshap.h:8, from src/predictor/treeshap.cc:4: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/predictor/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/predictor/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/predictor/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/predictor/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/predictor/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/./logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/constraints.cc -o src/tree/constraints.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/param.cc -o src/tree/param.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/fit_stump.cc -o src/tree/fit_stump.o In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/context.h:9, from src/tree/fit_stump.h:13, from src/tree/fit_stump.cc:6: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/tree_model.cc -o src/tree/tree_model.o In file included from ./dmlc-core/include/dmlc/io.h:15, from ./include/xgboost/data.h:11, from ./include/xgboost/tree_model.h:11, from src/tree/tree_model.cc:6: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GT(const X&, const Y&) [with X = unsigned int; Y = int]’: src/tree/tree_model.cc:899:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:198:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 198 | DEFINE_CHECK_FUNC(_GT, >) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/tree_model.cc:997:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/tree_model.cc:1021:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/tree/tree_model.cc:53:3: required from ‘std::string xgboost::{anonymous}::ToStr(xgboost::linalg::VectorView, xgboost::bst_target_t) [with Float = const float; std::string = std::__cxx11::basic_string; xgboost::linalg::VectorView = xgboost::linalg::TensorView; xgboost::bst_target_t = unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/tree/tree_model.cc:733:68: required from here 733 | {"{leaf-value}", ToStr(value, kLimit)}, | ~~~~~^~~~~~~~~~~~~~~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/tree_updater.cc -o src/tree/tree_updater.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/multi_target_tree_model.cc -o src/tree/multi_target_tree_model.o In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/context.h:9, from ./include/xgboost/multi_target_tree_model.h:10, from src/tree/multi_target_tree_model.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GT(const X&, const Y&) [with X = unsigned int; Y = int]’: src/tree/multi_target_tree_model.cc:30:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:198:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 198 | DEFINE_CHECK_FUNC(_GT, >) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/multi_target_tree_model.cc:68:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/multi_target_tree_model.cc:81:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/tree/multi_target_tree_model.cc:165:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = int; Y = long unsigned int]’: src/tree/multi_target_tree_model.cc:239:7: required from ‘xgboost::MultiTargetTree::SaveModel(xgboost::Json*) const:: [with auto:6 = xgboost::JsonTypedArray]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/tree/multi_target_tree_model.cc:263:14: required from here 263 | save_tree(&indices_64); | ~~~~~~~~~^~~~~~~~~~~~~ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘const long unsigned int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/updater_approx.cc -o src/tree/updater_approx.o In file included from ./include/xgboost/logging.h:11, from src/tree/../collective/../data/../common/common.h:18, from src/tree/../collective/../data/../common/bitfield.h:21, from src/tree/../collective/../data/array_interface.h:18, from src/tree/../collective/allreduce.h:11, from src/tree/../collective/aggregator.h:13, from src/tree/updater_approx.cc:13: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/tree/hist/histogram.h:338:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../collective/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/tree/../collective/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/tree/../collective/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/tree/../common/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/updater_colmaker.cc -o src/tree/updater_colmaker.o In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/context.h:9, from src/tree/../common/error_msg.h:15, from src/tree/updater_colmaker.cc:11: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../common/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/updater_prune.cc -o src/tree/updater_prune.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/updater_quantile_hist.cc -o src/tree/updater_quantile_hist.o In file included from ./include/xgboost/logging.h:11, from src/tree/../collective/../data/../common/common.h:18, from src/tree/../collective/../data/../common/bitfield.h:21, from src/tree/../collective/../data/array_interface.h:18, from src/tree/../collective/allreduce.h:11, from src/tree/../collective/aggregator.h:13, from src/tree/updater_quantile_hist.cc:15: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/tree/hist/histogram.h:338:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../collective/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/tree/../collective/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/tree/../collective/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/tree/../common/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/updater_refresh.cc -o src/tree/updater_refresh.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from ./include/xgboost/tree_updater.h:11, from src/tree/updater_refresh.cc:7: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../collective/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/tree/../collective/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/tree/../collective/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/tree/../predictor/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/./logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/updater_sync.cc -o src/tree/updater_sync.o In file included from ./include/xgboost/logging.h:11, from src/tree/../collective/../common/timer.h:5, from src/tree/../collective/loop.h:17, from src/tree/../collective/comm.h:14, from src/tree/../collective/broadcast.h:8, from src/tree/updater_sync.cc:9: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/hist/hist_param.cc -o src/tree/hist/hist_param.o In file included from ./dmlc-core/include/dmlc/./json.h:24, from ./dmlc-core/include/dmlc/parameter.h:26, from ./include/xgboost/parameter.h:11, from src/tree/hist/hist_param.h:9, from src/tree/hist/hist_param.cc:4: ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/hist/../../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/././logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/tree/hist/histogram.cc -o src/tree/hist/histogram.o In file included from ./include/xgboost/logging.h:11, from src/tree/hist/../../collective/../data/../common/common.h:18, from src/tree/hist/../../collective/../data/../common/bitfield.h:21, from src/tree/hist/../../collective/../data/array_interface.h:18, from src/tree/hist/../../collective/allreduce.h:11, from src/tree/hist/histogram.h:13, from src/tree/hist/histogram.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/hist/../../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/tree/hist/../../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/tree/hist/histogram.h:338:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/linear/linear_updater.cc -o src/linear/linear_updater.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/linear/updater_coordinate.cc -o src/linear/updater_coordinate.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from ./include/xgboost/linear_updater.h:6, from src/linear/updater_coordinate.cc:6: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/linear/../common/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/linear/updater_shotgun.cc -o src/linear/updater_shotgun.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from ./include/xgboost/linear_updater.h:6, from src/linear/updater_shotgun.cc:6: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/linear/../common/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/learner.cc -o src/learner.o In file included from ./dmlc-core/include/dmlc/io.h:15, from ./include/xgboost/learner.h:11, from src/learner.cc:7: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/learner.cc:207:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/learner.cc:422:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/learner.cc:814:5: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/context.cc -o src/context.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/logging.cc -o src/logging.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/global_config.cc -o src/global_config.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/result.cc -o src/collective/result.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/allgather.cc -o src/collective/allgather.o In file included from ./include/xgboost/logging.h:11, from src/collective/../common/timer.h:5, from src/collective/loop.h:17, from src/collective/comm.h:14, from src/collective/allgather.h:14, from src/collective/allgather.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/allgather.cc:36:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/allreduce.cc -o src/collective/allreduce.o In file included from ./include/xgboost/logging.h:11, from src/collective/../data/../common/common.h:18, from src/collective/../data/../common/bitfield.h:21, from src/collective/../data/array_interface.h:18, from src/collective/allreduce.h:11, from src/collective/allreduce.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/broadcast.cc -o src/collective/broadcast.o In file included from ./include/xgboost/logging.h:11, from src/collective/../common/timer.h:5, from src/collective/loop.h:17, from src/collective/comm.h:14, from src/collective/broadcast.h:8, from src/collective/broadcast.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/collective/broadcast.cc:31:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/comm.cc -o src/collective/comm.o In file included from ./include/xgboost/logging.h:11, from src/collective/../common/timer.h:5, from src/collective/loop.h:17, from src/collective/comm.h:14, from src/collective/comm.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/comm_group.cc -o src/collective/comm_group.o In file included from ./include/xgboost/logging.h:11, from src/collective/../data/../common/common.h:18, from src/collective/../data/../common/bitfield.h:21, from src/collective/../data/array_interface.h:18, from src/collective/coll.h:8, from src/collective/comm_group.h:9, from src/collective/comm_group.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/coll.cc -o src/collective/coll.o In file included from ./include/xgboost/logging.h:11, from src/collective/../data/../common/common.h:18, from src/collective/../data/../common/bitfield.h:21, from src/collective/../data/array_interface.h:18, from src/collective/coll.h:8, from src/collective/coll.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/tracker.cc -o src/collective/tracker.o In file included from src/collective/tracker.cc:30: ./include/xgboost/collective/poll_utils.h:46:14: warning: this use of ‘defined’ may not be portable [-Wexpansion-to-defined] 46 | #if IS_MINGW() && !defined(POLLRDNORM) && !defined(POLLRDBAND) | ^ ./include/xgboost/collective/poll_utils.h:230:14: warning: this use of ‘defined’ may not be portable [-Wexpansion-to-defined] 230 | #if IS_MINGW() && !defined(POLLRDNORM) && !defined(POLLRDBAND) | ^ In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/json.h:8, from src/collective/../common/json_utils.h:13, from src/collective/tracker.cc:25: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/tracker.cc:182:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/tracker.cc:188:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:199:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 199 | DEFINE_CHECK_FUNC(_LE, <=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/tracker.cc:207:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/in_memory_handler.cc -o src/collective/in_memory_handler.o In file included from ./include/xgboost/logging.h:11, from src/collective/../data/../common/common.h:18, from src/collective/../data/../common/bitfield.h:21, from src/collective/../data/array_interface.h:18, from src/collective/in_memory_handler.h:9, from src/collective/in_memory_handler.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/loop.cc -o src/collective/loop.o In file included from src/collective/loop.cc:18: ./include/xgboost/collective/poll_utils.h:46:14: warning: this use of ‘defined’ may not be portable [-Wexpansion-to-defined] 46 | #if IS_MINGW() && !defined(POLLRDNORM) && !defined(POLLRDBAND) | ^ ./include/xgboost/collective/poll_utils.h:230:14: warning: this use of ‘defined’ may not be portable [-Wexpansion-to-defined] 230 | #if IS_MINGW() && !defined(POLLRDNORM) && !defined(POLLRDBAND) | ^ In file included from ./include/xgboost/logging.h:11, from src/collective/../common/timer.h:5, from src/collective/loop.h:17, from src/collective/loop.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/loop.cc:264:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/collective/socket.cc -o src/collective/socket.o In file included from src/collective/socket.cc:14: ./include/xgboost/collective/poll_utils.h:46:14: warning: this use of ‘defined’ may not be portable [-Wexpansion-to-defined] 46 | #if IS_MINGW() && !defined(POLLRDNORM) && !defined(POLLRDBAND) | ^ ./include/xgboost/collective/poll_utils.h:230:14: warning: this use of ‘defined’ may not be portable [-Wexpansion-to-defined] 230 | #if IS_MINGW() && !defined(POLLRDNORM) && !defined(POLLRDBAND) | ^ In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/collective/socket.h:54, from src/collective/socket.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/collective/socket.cc:70:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/charconv.cc -o src/common/charconv.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/column_matrix.cc -o src/common/column_matrix.o In file included from ./dmlc-core/include/dmlc/./io.h:15, from ./dmlc-core/include/dmlc/data.h:14, from src/common/../data/adapter.h:7, from src/common/column_matrix.h:18, from src/common/column_matrix.cc:5: ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/././logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../data/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/././logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/common/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/common/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/common/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/././logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/common.cc -o src/common/common.o In file included from ./include/xgboost/logging.h:11, from src/common/common.h:18, from src/common/common.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/./../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/cuda_rt_utils.cc -o src/common/cuda_rt_utils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/error_msg.cc -o src/common/error_msg.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/hist_util.cc -o src/common/hist_util.o In file included from ./include/xgboost/logging.h:11, from src/common/common.h:18, from src/common/bitfield.h:21, from src/common/categorical.h:8, from src/common/hist_util.h:17, from src/common/hist_util.cc:5: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/common/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/common/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/common/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/hist_util.cc:240:3: required from ‘void xgboost::common::RowsWiseBuildHistKernel(Span >, Span, const xgboost::GHistIndexMatrix&, GHistRow) [with bool do_prefetch = false; BuildingManager = GHistBuildingManager; GHistRow = Span >]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/common/hist_util.cc:354:54: required from ‘void xgboost::common::BuildHistDispatch(Span >, Span, const xgboost::GHistIndexMatrix&, GHistRow) [with BuildingManager = GHistBuildingManager; GHistRow = Span >]’ 354 | RowsWiseBuildHistKernel(gpair, row_indices, gmat, hist); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/common/hist_util.cc:384:9: required from ‘xgboost::common::BuildHist(Span >, Span, const xgboost::GHistIndexMatrix&, GHistRow, bool):: [with auto:63 = xgboost::common::GHistBuildingManager]’ 384 | BuildHistDispatch(gpair, row_indices, gmat, hist); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/common/hist_util.cc:206:9: required from ‘static void xgboost::common::GHistBuildingManager<_any_missing, _first_page, _read_by_column, BinIdxTypeName>::DispatchAndExecute(const xgboost::common::RuntimeFlags&, Fn&&) [with Fn = xgboost::common::BuildHist(Span >, Span, const xgboost::GHistIndexMatrix&, GHistRow, bool)::; bool _any_missing = true; bool _first_page = false; bool _read_by_column = false; BinIdxTypeName = unsigned char]’ 206 | fn(Type()); | ~~^~~~~~~~ src/common/hist_util.cc:381:56: required from ‘void xgboost::common::BuildHist(Span >, Span, const xgboost::GHistIndexMatrix&, GHistRow, bool) [with bool any_missing = true; GHistRow = Span >]’ 381 | GHistBuildingManager::DispatchAndExecute( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 382 | {first_page, read_by_column || force_read_by_column, bin_type_size}, [&](auto t) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 | using BuildingManager = decltype(t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 | BuildHistDispatch(gpair, row_indices, gmat, hist); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 | }); | ~~ src/common/hist_util.cc:390:56: required from here 390 | bool force_read_by_column); | ^ ./dmlc-core/include/dmlc/logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/host_device_vector.cc -o src/common/host_device_vector.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/io.cc -o src/common/io.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/json.cc -o src/common/json.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/linalg_op.cc -o src/common/linalg_op.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/numeric.cc -o src/common/numeric.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/optional_weight.cc -o src/common/optional_weight.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/pseudo_huber.cc -o src/common/pseudo_huber.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/quantile.cc -o src/common/quantile.o In file included from ./dmlc-core/include/dmlc/io.h:15, from ./include/xgboost/data.h:11, from src/common/quantile.h:10, from src/common/quantile.cc:4: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/quantile.cc:30:3: required from ‘xgboost::common::SketchContainerImpl::SketchContainerImpl(const xgboost::Context*, std::vector, xgboost::bst_bin_t, xgboost::common::Span, bool) [with WQSketch = xgboost::common::WXQuantileSketch; xgboost::bst_bin_t = int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/common/quantile.h:1002:71: required from here 1002 | : SketchContainerImpl{ctx, columns_size, max_bins, ft, use_group} { | ^ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../collective/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/common/../collective/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/common/../collective/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/common/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/./logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/random.cc -o src/common/random.o In file included from ./include/xgboost/logging.h:11, from src/common/random.h:10, from src/common/random.cc:4: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/random.cc:33:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:198:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 198 | DEFINE_CHECK_FUNC(_GT, >) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/stats.cc -o src/common/stats.o In file included from ./dmlc-core/include/dmlc/common.h:15, from src/common/numeric.h:7, from src/common/algorithm.h:12, from src/common/stats.h:11, from src/common/stats.cc:4: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_NE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/common/stats.cc:40:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:202:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 202 | DEFINE_CHECK_FUNC(_NE, !=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/survival_util.cc -o src/common/survival_util.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/threading_utils.cc -o src/common/threading_utils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/ranking_utils.cc -o src/common/ranking_utils.o In file included from ./dmlc-core/include/dmlc/./json.h:24, from ./dmlc-core/include/dmlc/parameter.h:26, from src/common/ranking_utils.h:14, from src/common/ranking_utils.cc:4: ./dmlc-core/include/dmlc/././logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = unsigned int; Y = int]’: src/common/ranking_utils.h:221:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/././logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/././logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/param_array.cc -o src/common/param_array.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/quantile_loss_utils.cc -o src/common/quantile_loss_utils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/timer.cc -o src/common/timer.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/common/version.cc -o src/common/version.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/c_api/c_api.cc -o src/c_api/c_api.o In file included from ./dmlc-core/include/dmlc/registry.h:13, from ./include/xgboost/predictor.h:8, from src/c_api/../common/api_entry.h:10, from src/c_api/c_api.cc:18: ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_GE(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/c_api/../common/quantile.h:699:3: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:200:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 200 | DEFINE_CHECK_FUNC(_GE, >=) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/c_api/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/./logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ ./dmlc-core/include/dmlc/./logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_LT(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/c_api/../data/array_interface.h:245:7: required from ‘static void xgboost::ArrayInterfaceHandler::ExtractShape(const xgboost::JsonObject::Map&, size_t (&)[D]) [with int D = 2; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >; size_t = long unsigned int]’ 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ src/c_api/../data/array_interface.h:411:40: required from ‘void xgboost::ArrayInterface::Initialize(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 411 | ArrayInterfaceHandler::ExtractShape(array, shape); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ src/c_api/../data/array_interface.h:450:61: required from ‘xgboost::ArrayInterface::ArrayInterface(const xgboost::JsonObject::Map&) [with int D = 2; bool allow_mask = false; xgboost::JsonObject::Map = std::map, xgboost::Json, std::less >]’ 450 | explicit ArrayInterface(Object::Map const &array) { this->Initialize(array); } | ~~~~~~^~~~~~~~~~ src/c_api/../data/adapter.h:204:62: required from here 204 | array_interface_ = ArrayInterface<2>(get(j)); | ^ ./dmlc-core/include/dmlc/./logging.h:197:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 197 | DEFINE_CHECK_FUNC(_LT, <) | ^ ./dmlc-core/include/dmlc/./logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c src/c_api/c_api_error.cc -o src/c_api/c_api_error.o In file included from ./include/xgboost/logging.h:11, from ./include/xgboost/json.h:8, from src/c_api/./../common/json_utils.h:13, from src/c_api/./c_api_utils.h:17, from src/c_api/./c_api_error.h:11, from src/c_api/c_api_error.cc:6: ./dmlc-core/include/dmlc/logging.h: In instantiation of ‘std::unique_ptr > dmlc::LogCheck_EQ(const X&, const Y&) [with X = long unsigned int; Y = int]’: src/c_api/../collective/../data/array_interface.h:172:7: required from here 206 | if (auto __dmlc__log__err = dmlc::LogCheck##name(x, y)) \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~ ./dmlc-core/include/dmlc/logging.h:201:24: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 201 | DEFINE_CHECK_FUNC(_EQ, ==) | ^ ./dmlc-core/include/dmlc/logging.h:188:11: note: in definition of macro ‘DEFINE_CHECK_FUNC’ 188 | if (x op y) return nullptr; \ | ^~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./include -I./dmlc-core/include -I. -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=1 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c amalgamation/dmlc-minimum0.cc -o amalgamation/dmlc-minimum0.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o xgboost.so ./xgboost_R.o ./xgboost_custom.o ./init.o ./src/metric/metric.o ./src/metric/elementwise_metric.o ./src/metric/multiclass_metric.o ./src/metric/rank_metric.o ./src/metric/auc.o ./src/metric/survival_metric.o ./src/objective/objective.o ./src/objective/regression_obj.o ./src/objective/multiclass_obj.o ./src/objective/lambdarank_obj.o ./src/objective/hinge.o ./src/objective/aft_obj.o ./src/objective/adaptive.o ./src/objective/init_estimation.o ./src/objective/quantile_obj.o ./src/gbm/gbm.o ./src/gbm/gbtree.o ./src/gbm/gbtree_model.o ./src/gbm/gblinear.o ./src/gbm/gblinear_model.o ./src/data/adapter.o ./src/data/array_interface.o ./src/data/cat_container.o ./src/data/simple_dmatrix.o ./src/data/data.o ./src/data/sparse_page_raw_format.o ./src/data/ellpack_page.o ./src/data/file_iterator.o ./src/data/gradient_index.o ./src/data/gradient_index_page_source.o ./src/data/gradient_index_format.o ./src/data/validation.o ./src/data/sparse_page_dmatrix.o ./src/data/sparse_page_source.o ./src/data/extmem_quantile_dmatrix.o ./src/data/quantile_dmatrix.o ./src/data/batch_utils.o ./src/data/proxy_dmatrix.o ./src/data/iterative_dmatrix.o ./src/predictor/predictor.o ./src/predictor/cpu_predictor.o ./src/predictor/treeshap.o ./src/tree/constraints.o ./src/tree/param.o ./src/tree/fit_stump.o ./src/tree/tree_model.o ./src/tree/tree_updater.o ./src/tree/multi_target_tree_model.o ./src/tree/updater_approx.o ./src/tree/updater_colmaker.o ./src/tree/updater_prune.o ./src/tree/updater_quantile_hist.o ./src/tree/updater_refresh.o ./src/tree/updater_sync.o ./src/tree/hist/hist_param.o ./src/tree/hist/histogram.o ./src/linear/linear_updater.o ./src/linear/updater_coordinate.o ./src/linear/updater_shotgun.o ./src/learner.o ./src/context.o ./src/logging.o ./src/global_config.o ./src/collective/result.o ./src/collective/allgather.o ./src/collective/allreduce.o ./src/collective/broadcast.o ./src/collective/comm.o ./src/collective/comm_group.o ./src/collective/coll.o ./src/collective/tracker.o ./src/collective/in_memory_handler.o ./src/collective/loop.o ./src/collective/socket.o ./src/common/charconv.o ./src/common/column_matrix.o ./src/common/common.o ./src/common/cuda_rt_utils.o ./src/common/error_msg.o ./src/common/hist_util.o ./src/common/host_device_vector.o ./src/common/io.o ./src/common/json.o ./src/common/linalg_op.o ./src/common/numeric.o ./src/common/optional_weight.o ./src/common/pseudo_huber.o ./src/common/quantile.o ./src/common/random.o ./src/common/stats.o ./src/common/survival_util.o ./src/common/threading_utils.o ./src/common/ranking_utils.o ./src/common/param_array.o ./src/common/quantile_loss_utils.o ./src/common/timer.o ./src/common/version.o ./src/c_api/c_api.o ./src/c_api/c_api_error.o ./amalgamation/dmlc-minimum0.o -fopenmp -DDMLC_CMAKE_LITTLE_ENDIAN=1 -pthread -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp6f3dC4/R.INSTALL5a70a8cfad68/xgboost/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-xgboost/00new/xgboost/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xgboost) begin installing package ‘modeltime’ * installing *source* package ‘modeltime’ ... ** this is package ‘modeltime’ version ‘1.3.2’ ** package ‘modeltime’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modeltime) begin installing package ‘modeltime.resample’ * installing *source* package ‘modeltime.resample’ ... ** this is package ‘modeltime.resample’ version ‘0.3.0’ ** package ‘modeltime.resample’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modeltime.resample) begin installing package ‘modeltime.ensemble’ * installing *source* package ‘modeltime.ensemble’ ... ** this is package ‘modeltime.ensemble’ version ‘1.1.0’ ** package ‘modeltime.ensemble’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modeltime.ensemble) checking officer_0.7.2.tar.gz ... checking apmx_1.1.1.tar.gz ... checking assertHE_1.0.0.tar.gz ... checking augmentedRCBD_0.1.7.tar.gz ... checking autoReg_0.3.3.tar.gz ... checking autoslider.core_0.3.1.tar.gz ... checking bfw_0.4.2.tar.gz ... checking codebookr_0.1.8.tar.gz ... checking clinify_0.3.0.tar.gz ... checking compareGroups_4.10.1.tar.gz ... checking crosstable_0.8.2.tar.gz ... checking demoGraphic_0.1.0.tar.gz ... checking documenter_0.1.3.tar.gz ... checking DemographicTable_0.2.3.tar.gz ... checking epiR_2.0.88.tar.gz ... checking eoffice_0.2.2.tar.gz ... checking EpiReport_1.0.4.tar.gz ... checking examly_0.1.2.tar.gz ... checking export_0.3.2.tar.gz ... checking flextable_0.9.10.tar.gz ... checking GRShiny_1.0.1.tar.gz ... checking gto_0.1.2.tar.gz ... checking gtregression_1.0.0.tar.gz ... checking GWSDAT_3.2.1.tar.gz ... checking interactionR_0.1.7.tar.gz ... checking interpretCI_0.1.1.tar.gz ... checking inTextSummaryTable_3.3.5.tar.gz ... checking ivo.table_0.7.1.tar.gz ... checking presenter_0.1.2.tar.gz ... checking RAGFlowChainR_0.1.5.tar.gz ... checking rsides_0.1.tar.gz ... checking officedown_0.4.1.tar.gz ... checking gtsummary_2.4.0.tar.gz ... checking microplot_1.0-47.tar.gz ... checking robmedExtra_0.1.1.tar.gz ... checking survC_0.1.0.tar.gz ... checking LLMAgentR_0.3.0.tar.gz ... checking esquisse_2.1.0.tar.gz ... checking revise_0.1.0.tar.gz ... checking r2pptx_0.1.0.tar.gz ... checking saros_1.6.0.tar.gz ... checking repmod_0.1.7.tar.gz ... checking reappraised_0.1.1.tar.gz ... checking table1_1.5.1.tar.gz ... checking flexlsx_0.3.5.tar.gz ... checking accessr_1.1.3.tar.gz ... checking manymome.table_0.4.0.tar.gz ... checking kfa_0.2.2.tar.gz ... checking mschart_0.4.1.tar.gz ... checking rrtable_0.3.0.tar.gz ... checking Mediana_1.0.8.tar.gz ... checking MCPModPack_0.5.tar.gz ... checking pmxcode_0.3.1.tar.gz ... checking summarySCI_0.1.1.tar.gz ... checking xlsform2word_0.1.0.tar.gz ... checking mitey_0.2.0.tar.gz ... checking ztable_0.2.3.tar.gz ... checking r2rtf_1.2.0.tar.gz ... checking statgenGWAS_1.0.12.tar.gz ... checking onbrand_1.0.7.tar.gz ... checking jsmodule_1.6.15.tar.gz ... checking Rrepest_1.5.4.tar.gz ... checking relMix_1.4.1.tar.gz ... checking thinkr_0.16.tar.gz ... checking basictabler_1.0.4.tar.gz ... checking huxtable_5.8.0.tar.gz ... checking visvaR_1.0.0.tar.gz ... checking pdfcombiner_1.9.8.tar.gz ... checking MedianaDesigner_0.13.tar.gz ... checking VisualizeSimon2Stage_0.2.2.tar.gz ... checking SUMO_1.2.3.tar.gz ... checking rvg_0.4.0.tar.gz ... checking rtables.officer_0.1.1.tar.gz ... checking modelsummary_2.5.0.tar.gz ... checking activAnalyzer_2.1.2.tar.gz ... checking metacor_1.2.0.tar.gz ... checking kardl_0.1.1.tar.gz ... checking ubiquity_2.1.0.tar.gz ... checking WordR_0.3.6.tar.gz ... checking SurveyDefense_0.2.0.tar.gz ... checking visOmopResults_1.4.0.tar.gz ... checking rmsMD_1.0.1.tar.gz ... checking TestAnaAPP_1.1.2.tar.gz ... checking reservr_0.0.3.tar.gz ... checking strand_0.2.2.tar.gz ... checking washi_0.2.1.tar.gz ... checking toxSummary_1.0.0.tar.gz ... Depends: Package: officer Imports: cli, dplyr, graphics, grDevices, openssl, R6, ragg, stats, tidyr, utils, uuid, xml2 (>= 1.1.0), zip (>= 2.1.0) Timings: user system elapsed officer 219.698 9.64 236.311 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 6 80 Check results summary: officer ... OK rdepends_accessr ... OK rdepends_activAnalyzer ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_apmx ... OK rdepends_assertHE ... OK rdepends_augmentedRCBD ... OK rdepends_autoReg ... OK rdepends_autoslider.core ... OK rdepends_basictabler ... OK rdepends_bfw ... OK rdepends_clinify ... OK rdepends_codebookr ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_compareGroups ... OK rdepends_crosstable ... OK rdepends_demoGraphic ... NOTE * checking for non-standard things in the check directory ... NOTE rdepends_DemographicTable ... OK rdepends_documenter ... OK rdepends_eoffice ... OK rdepends_epiR ... OK rdepends_EpiReport ... OK rdepends_esquisse ... OK rdepends_examly ... OK rdepends_export ... OK rdepends_flexlsx ... OK rdepends_flextable ... OK rdepends_GRShiny ... OK rdepends_gto ... OK rdepends_gtregression ... OK rdepends_gtsummary ... OK rdepends_GWSDAT ... OK rdepends_huxtable ... OK rdepends_interactionR ... OK rdepends_interpretCI ... OK rdepends_inTextSummaryTable ... OK rdepends_ivo.table ... OK rdepends_jsmodule ... OK rdepends_kardl ... OK rdepends_kfa ... OK rdepends_LLMAgentR ... OK rdepends_manymome.table ... OK rdepends_MCPModPack ... OK rdepends_Mediana ... OK rdepends_MedianaDesigner ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_metacor ... OK rdepends_microplot ... OK rdepends_mitey ... OK rdepends_modelsummary ... OK rdepends_mschart ... OK rdepends_officedown ... OK rdepends_onbrand ... OK rdepends_pdfcombiner ... OK rdepends_pmxcode ... OK rdepends_presenter ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_r2pptx ... OK rdepends_r2rtf ... OK rdepends_RAGFlowChainR ... OK rdepends_reappraised ... OK rdepends_relMix ... OK rdepends_repmod ... OK rdepends_reservr ... OK rdepends_revise ... OK rdepends_rmsMD ... OK rdepends_robmedExtra ... OK rdepends_Rrepest ... OK rdepends_rrtable ... OK rdepends_rsides ... OK rdepends_rtables.officer ... OK rdepends_rvg ... OK rdepends_saros ... OK rdepends_statgenGWAS ... OK rdepends_strand ... OK rdepends_summarySCI ... OK rdepends_SUMO ... OK rdepends_survC ... OK rdepends_SurveyDefense ... OK rdepends_table1 ... OK rdepends_TestAnaAPP ... OK rdepends_thinkr ... OK rdepends_toxSummary ... OK rdepends_ubiquity ... OK rdepends_visOmopResults ... OK rdepends_VisualizeSimon2Stage ... OK rdepends_visvaR ... OK rdepends_washi ... OK rdepends_WordR ... OK rdepends_xlsform2word ... OK rdepends_ztable ... NOTE * checking Rd files ... [0s/0s] NOTE Check results changes: Package: augmentedRCBD Check: DESCRIPTION meta-information Old result: NOTE New result: OK Package: GWSDAT Check: CRAN incoming feasibility Old result: NOTE Package: interactionR Check: CRAN incoming feasibility Old result: NOTE Package: kfa Check: CRAN incoming feasibility Old result: NOTE Package: Mediana Check: CRAN incoming feasibility Old result: NOTE Package: repmod Check: CRAN incoming feasibility Old result: NOTE Package: WordR Check: CRAN incoming feasibility Old result: NOTE