downloading reverse dependencies ... downloading datrProfile_0.1.0.tar.gz ... ok downloading epidm_1.0.4.tar.gz ... ok downloading MCOE_0.4.0.tar.gz ... ok downloading pgTools_1.0.2.tar.gz ... ok downloading SangerTools_1.0.2.tar.gz ... ok downloading shiny.telemetry_0.3.1.tar.gz ... ok downloading sqlHelpers_0.1.2.tar.gz ... ok downloading virtuoso_0.1.8.tar.gz ... ok downloading AzureCosmosR_1.0.0.tar.gz ... ok downloading CDMConnector_2.0.0.tar.gz ... ok downloading CodelistGenerator_3.4.0.tar.gz ... ok downloading CohortCharacteristics_0.4.0.tar.gz ... ok downloading CohortConstructor_0.3.5.tar.gz ... ok downloading CohortSymmetry_0.2.1.tar.gz ... ok downloading DatabaseConnector_6.4.0.tar.gz ... ok downloading dbplyr_2.5.0.tar.gz ... ok downloading dbx_0.3.2.tar.gz ... ok downloading diseasystore_0.3.1.tar.gz ... ok downloading dittodb_0.1.8.tar.gz ... ok downloading dm_1.0.11.tar.gz ... ok downloading DrugExposureDiagnostics_1.1.1.tar.gz ... ok downloading DrugUtilisation_0.8.2.tar.gz ... ok downloading implyr_0.5.0.tar.gz ... ok downloading IncidencePrevalence_1.1.0.tar.gz ... ok downloading nhanesA_1.3.tar.gz ... ok downloading octopus_0.4.2.tar.gz ... ok downloading OmopSketch_0.2.2.tar.gz ... ok downloading PatientProfiles_1.3.0.tar.gz ... ok downloading pointblank_0.12.2.tar.gz ... ok downloading REDCapR_1.4.0.tar.gz ... ok downloading SCDB_0.5.1.tar.gz ... ok downloading sf_1.0-19.tar.gz ... ok downloading soilDB_2.8.8.tar.gz ... ok downloading sqlhelper_0.2.1.tar.gz ... ok downloading tidywikidatar_0.5.9.tar.gz ... ok installing dependencies ‘Andromeda’, ‘aqp’, ‘AzureStor’, ‘AzureTableStor’, ‘bigrquery’, ‘blastula’, ‘CirceR’, ‘CohortCharacteristics’, ‘CohortConstructor’, ‘CohortSurvival’, ‘connectcreds’, ‘dittodb’, ‘DrugUtilisation’, ‘IncidencePrevalence’, ‘log4r’, ‘odbc’, ‘omock’, ‘ParallelLogger’, ‘phonics’, ‘pixarfilms’, ‘pkgcond’, ‘SCDB’, ‘semantic.dashboard’, ‘shiny.semantic’, ‘timevis’, ‘toolbox’, ‘WikidataQueryServiceR’, ‘WikidataR’ also installing the dependencies ‘semantic.assets’, ‘WikipediR’ begin installing package ‘semantic.assets’ begin installing package ‘WikipediR’ begin installing package ‘connectcreds’ begin installing package ‘phonics’ begin installing package ‘timevis’ begin installing package ‘toolbox’ begin installing package ‘CirceR’ begin installing package ‘bigrquery’ begin installing package ‘CohortConstructor’ begin installing package ‘DrugUtilisation’ begin installing package ‘omock’ begin installing package ‘IncidencePrevalence’ begin installing package ‘CohortCharacteristics’ begin installing package ‘Andromeda’ begin installing package ‘ParallelLogger’ begin installing package ‘AzureStor’ begin installing package ‘pkgcond’ begin installing package ‘SCDB’ begin installing package ‘pixarfilms’ begin installing package ‘CohortSurvival’ begin installing package ‘blastula’ begin installing package ‘log4r’ begin installing package ‘dittodb’ begin installing package ‘aqp’ begin installing package ‘odbc’ * installing *source* package ‘toolbox’ ... ** this is package ‘toolbox’ version ‘0.1.1’ ** package ‘toolbox’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (toolbox) * installing *source* package ‘pkgcond’ ... ** this is package ‘pkgcond’ version ‘0.1.1’ ** package ‘pkgcond’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgcond) * installing *source* package ‘WikipediR’ ... ** this is package ‘WikipediR’ version ‘1.7.1’ ** package ‘WikipediR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (WikipediR) begin installing package ‘WikidataQueryServiceR’ * installing *source* package ‘CirceR’ ... ** this is package ‘CirceR’ version ‘1.3.3’ ** package ‘CirceR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CirceR) * installing *source* package ‘pixarfilms’ ... ** this is package ‘pixarfilms’ version ‘0.2.1’ ** package ‘pixarfilms’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pixarfilms) * installing *source* package ‘log4r’ ... ** this is package ‘log4r’ version ‘0.4.4’ ** package ‘log4r’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMgFHys/R.INSTALL2c3a8fcdee7c0/log4r/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c log4r.c -o log4r.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c logfmt.c -o logfmt.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o log4r.so log4r.o logfmt.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMgFHys/R.INSTALL2c3a8fcdee7c0/log4r/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-log4r/00new/log4r/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (log4r) * installing *source* package ‘connectcreds’ ... ** this is package ‘connectcreds’ version ‘0.1.0’ ** package ‘connectcreds’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (connectcreds) * installing *source* package ‘timevis’ ... ** this is package ‘timevis’ version ‘2.1.0’ ** package ‘timevis’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (timevis) * installing *source* package ‘ParallelLogger’ ... ** this is package ‘ParallelLogger’ version ‘3.3.1’ ** package ‘ParallelLogger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ParallelLogger) * installing *source* package ‘dittodb’ ... ** this is package ‘dittodb’ version ‘0.1.8’ ** package ‘dittodb’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dittodb) * installing *source* package ‘WikidataQueryServiceR’ ... ** this is package ‘WikidataQueryServiceR’ version ‘1.0.0’ ** package ‘WikidataQueryServiceR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (WikidataQueryServiceR) begin installing package ‘WikidataR’ * installing *source* package ‘blastula’ ... ** this is package ‘blastula’ version ‘0.3.5’ ** package ‘blastula’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (blastula) * installing *source* package ‘semantic.assets’ ... ** this is package ‘semantic.assets’ version ‘1.1.0’ ** package ‘semantic.assets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (semantic.assets) begin installing package ‘shiny.semantic’ * installing *source* package ‘AzureStor’ ... ** this is package ‘AzureStor’ version ‘3.7.0’ ** package ‘AzureStor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AzureStor) begin installing package ‘AzureTableStor’ * installing *source* package ‘omock’ ... ** this is package ‘omock’ version ‘0.3.2’ ** package ‘omock’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (omock) * installing *source* package ‘SCDB’ ... ** this is package ‘SCDB’ version ‘0.5.1’ ** package ‘SCDB’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SCDB) * installing *source* package ‘CohortSurvival’ ... ** this is package ‘CohortSurvival’ version ‘0.6.2’ ** package ‘CohortSurvival’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortSurvival) * installing *source* package ‘CohortCharacteristics’ ... ** this is package ‘CohortCharacteristics’ version ‘0.4.0’ ** package ‘CohortCharacteristics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortCharacteristics) * installing *source* package ‘Andromeda’ ... ** this is package ‘Andromeda’ version ‘0.6.7’ ** package ‘Andromeda’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Andromeda) * installing *source* package ‘IncidencePrevalence’ ... ** this is package ‘IncidencePrevalence’ version ‘1.1.0’ ** package ‘IncidencePrevalence’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IncidencePrevalence) * installing *source* package ‘AzureTableStor’ ... ** this is package ‘AzureTableStor’ version ‘1.0.0’ ** package ‘AzureTableStor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AzureTableStor) * installing *source* package ‘DrugUtilisation’ ... ** this is package ‘DrugUtilisation’ version ‘0.8.2’ ** package ‘DrugUtilisation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DrugUtilisation) * installing *source* package ‘CohortConstructor’ ... ** this is package ‘CohortConstructor’ version ‘0.3.5’ ** package ‘CohortConstructor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortConstructor) * installing *source* package ‘WikidataR’ ... ** this is package ‘WikidataR’ version ‘2.3.3’ ** package ‘WikidataR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (WikidataR) * installing *source* package ‘shiny.semantic’ ... ** this is package ‘shiny.semantic’ version ‘0.5.1’ ** package ‘shiny.semantic’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.semantic) begin installing package ‘semantic.dashboard’ * installing *source* package ‘semantic.dashboard’ ... ** this is package ‘semantic.dashboard’ version ‘0.2.1’ ** package ‘semantic.dashboard’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (semantic.dashboard) * installing *source* package ‘phonics’ ... ** this is package ‘phonics’ version ‘1.3.10’ ** package ‘phonics’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmprl5sNX/R.INSTALL2c3a4e122ac13b/phonics/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c metaphone.cpp -o metaphone.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/iterator/iterator_categories.hpp:16, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/iterator/iterator_facade.hpp:13, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/range/iterator_range_core.hpp:27, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/range/iterator_range.hpp:13, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/range/as_literal.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/trim.hpp:19, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string.hpp:19, from metaphone.cpp:31: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/bind/mem_fn.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mem_fn.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/function/function_template.hpp:16, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/function.hpp:16, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/find_iterator.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/iter_find.hpp:27, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/split.hpp:16, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string.hpp:23: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/function/function_base.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/function/function_template.hpp:14: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ metaphone.cpp: In function ‘std::string metaphone_single(std::string, int, bool)’: metaphone.cpp:119:25: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 119 | while(meta.length() < maxCodeLen && i != word.end()) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c soundex.cpp -o soundex.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/iterator/iterator_categories.hpp:16, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/iterator/iterator_facade.hpp:13, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/range/iterator_range_core.hpp:27, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/range/iterator_range.hpp:13, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/range/as_literal.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/trim.hpp:19, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string.hpp:19, from soundex.cpp:29: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/bind/mem_fn.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mem_fn.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/function/function_template.hpp:16, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/function.hpp:16, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/find_iterator.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/iter_find.hpp:27, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string/split.hpp:16, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/algorithm/string.hpp:23: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/function/function_base.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/function/function_template.hpp:14: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o phonics.so RcppExports.o metaphone.o soundex.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmprl5sNX/R.INSTALL2c3a4e122ac13b/phonics/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-phonics/00new/phonics/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phonics) * installing *source* package ‘bigrquery’ ... ** this is package ‘bigrquery’ version ‘1.5.1’ ** package ‘bigrquery’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaPbOZ0/R.INSTALL2c3a675819b5e7/bigrquery/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rapidjsonr/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c BqField.cpp -o BqField.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rapidjsonr/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c base64.c -o base64.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rapidjsonr/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o bigrquery.so BqField.o base64.o cpp11.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaPbOZ0/R.INSTALL2c3a675819b5e7/bigrquery/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bigrquery/00new/bigrquery/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bigrquery) * installing *source* package ‘aqp’ ... ** this is package ‘aqp’ version ‘2.2’ ** package ‘aqp’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading in method for ‘coerce’ with signature ‘"SoilProfileCollection","tbl_df"’: no definition for class “tbl_df” in method for ‘coerce’ with signature ‘"SoilProfileCollection","SpatialPointsDataFrame"’: no definition for class “SpatialPointsDataFrame” in method for ‘coerce’ with signature ‘"SoilProfileCollection","sf"’: no definition for class “sf” in method for ‘coerce’ with signature ‘"SoilProfileCollection","SpatialPoints"’: no definition for class “SpatialPoints” Creating a generic function for ‘nrow’ from package ‘base’ in package ‘aqp’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aqp) * installing *source* package ‘odbc’ ... ** this is package ‘odbc’ version ‘1.6.0’ ** using staged installation Found pkg-config cflags and libs! PKG_CFLAGS= PKG_LIBS=-lodbc ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyBKsQr/R.INSTALL2c3a9114e50531/odbc/src' (cd cctz && \ make libcctz.a CC="gcc-14 -std=gnu23" CXX="g++-14 -std=gnu++17" CXXFLAGS="-g -O2 -Wall -pedantic -mtune=native " AR="ar" ARFLAGS=rcs CXXPICFLAGS="-fpic") make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpyBKsQr/R.INSTALL2c3a9114e50531/odbc/src/cctz' g++-14 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -Wall -Iinclude -std=c++11 -pthread -O -fpic -MMD -c -o time_zone_format.o src/time_zone_format.cc g++-14 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -Wall -Iinclude -std=c++11 -pthread -O -fpic -MMD -c -o time_zone_if.o src/time_zone_if.cc g++-14 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -Wall -Iinclude -std=c++11 -pthread -O -fpic -MMD -c -o time_zone_impl.o src/time_zone_impl.cc g++-14 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -Wall -Iinclude -std=c++11 -pthread -O -fpic -MMD -c -o time_zone_info.o src/time_zone_info.cc g++-14 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -Wall -Iinclude -std=c++11 -pthread -O -fpic -MMD -c -o time_zone_libc.o src/time_zone_libc.cc g++-14 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -Wall -Iinclude -std=c++11 -pthread -O -fpic -MMD -c -o time_zone_lookup.o src/time_zone_lookup.cc g++-14 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -Wall -Iinclude -std=c++11 -pthread -O -fpic -MMD -c -o time_zone_posix.o src/time_zone_posix.cc ar rcs libcctz.a time_zone_format.o time_zone_if.o time_zone_impl.o time_zone_info.o time_zone_libc.o time_zone_lookup.o time_zone_posix.o make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpyBKsQr/R.INSTALL2c3a9114e50531/odbc/src/cctz' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Icctz/include -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c odbc_result.cpp -o odbc_result.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Icctz/include -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c connection.cpp -o connection.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Icctz/include -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -DNANODBC_OVERALLOCATE_CHAR -c nanodbc/nanodbc.cpp -o nanodbc.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Icctz/include -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c result.cpp -o result.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Icctz/include -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c odbc_connection.cpp -o odbc_connection.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Icctz/include -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Icctz/include -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c Iconv.cpp -o Iconv.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Icctz/include -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o odbc.so odbc_result.o connection.o nanodbc.o result.o odbc_connection.o RcppExports.o Iconv.o utils.o -lodbc -Lcctz -lcctz -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyBKsQr/R.INSTALL2c3a9114e50531/odbc/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-odbc/00new/odbc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (odbc) checking odbc_1.6.0.tar.gz ... checking datrProfile_0.1.0.tar.gz ... checking epidm_1.0.4.tar.gz ... checking MCOE_0.4.0.tar.gz ... checking pgTools_1.0.2.tar.gz ... checking SangerTools_1.0.2.tar.gz ... checking shiny.telemetry_0.3.1.tar.gz ... checking sqlHelpers_0.1.2.tar.gz ... checking virtuoso_0.1.8.tar.gz ... checking AzureCosmosR_1.0.0.tar.gz ... checking CDMConnector_2.0.0.tar.gz ... checking CodelistGenerator_3.4.0.tar.gz ... checking CohortCharacteristics_0.4.0.tar.gz ... checking CohortConstructor_0.3.5.tar.gz ... checking CohortSymmetry_0.2.1.tar.gz ... checking DatabaseConnector_6.4.0.tar.gz ... checking dbplyr_2.5.0.tar.gz ... checking dbx_0.3.2.tar.gz ... checking diseasystore_0.3.1.tar.gz ... checking dittodb_0.1.8.tar.gz ... checking dm_1.0.11.tar.gz ... checking DrugExposureDiagnostics_1.1.1.tar.gz ... checking DrugUtilisation_0.8.2.tar.gz ... checking implyr_0.5.0.tar.gz ... checking IncidencePrevalence_1.1.0.tar.gz ... checking nhanesA_1.3.tar.gz ... checking octopus_0.4.2.tar.gz ... checking OmopSketch_0.2.2.tar.gz ... checking pointblank_0.12.2.tar.gz ... checking tidywikidatar_0.5.9.tar.gz ... checking sf_1.0-19.tar.gz ... checking SCDB_0.5.1.tar.gz ... checking REDCapR_1.4.0.tar.gz ... checking sqlhelper_0.2.1.tar.gz ... checking soilDB_2.8.8.tar.gz ... checking PatientProfiles_1.3.0.tar.gz ... Depends: Package: odbc Depends: R (>= 4.0.0) Imports: bit64, blob (>= 1.2.0), cli, DBI (>= 1.0.0), hms, lifecycle, methods, Rcpp (>= 0.12.11), rlang (>= 1.1.0) LinkingTo: Rcpp Timings: user system elapsed odbc 124.791 9.086 137.122 Results: Check status summary: ERROR NOTE OK Source packages 0 0 1 Reverse depends 2 10 23 Check results summary: odbc ... OK rdepends_AzureCosmosR ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_CDMConnector ... OK rdepends_CodelistGenerator ... OK rdepends_CohortCharacteristics ... ERROR * checking DESCRIPTION meta-information ... NOTE * checking tests ... [334s/185s] ERROR rdepends_CohortConstructor ... OK rdepends_CohortSymmetry ... OK rdepends_DatabaseConnector ... OK rdepends_datrProfile ... OK rdepends_dbplyr ... NOTE * checking Rd cross-references ... NOTE rdepends_dbx ... OK rdepends_diseasystore ... OK rdepends_dittodb ... NOTE * checking Rd cross-references ... NOTE rdepends_dm ... NOTE * checking for unstated dependencies in ‘demo’ ... NOTE rdepends_DrugExposureDiagnostics ... OK rdepends_DrugUtilisation ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_epidm ... OK rdepends_implyr ... OK rdepends_IncidencePrevalence ... OK rdepends_MCOE ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_nhanesA ... OK rdepends_octopus ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_OmopSketch ... ERROR * checking re-building of vignette outputs ... [203s/199s] ERROR rdepends_PatientProfiles ... OK rdepends_pgTools ... OK rdepends_pointblank ... OK rdepends_REDCapR ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_SangerTools ... OK rdepends_SCDB ... OK rdepends_sf ... NOTE * checking DESCRIPTION meta-information ... NOTE * checking top-level files ... NOTE * checking for unstated dependencies in ‘demo’ ... NOTE rdepends_shiny.telemetry ... OK rdepends_soilDB ... OK rdepends_sqlhelper ... OK rdepends_sqlHelpers ... OK rdepends_tidywikidatar ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_virtuoso ... OK Check results changes: Package: diseasystore [Old version: 0.3.0, New version: 0.3.1] Check: DESCRIPTION meta-information Old result: NOTE New result: OK