library(oce) f <- "~/Dropbox/data/archive/sleiwex/2008/fielddata/2008-07-01/Merlu/Biosonics/20080701_163942.dt4" if (file.exists(f)) { test_that("private biosonics file", { echosounder <- read.oce(f) echosounder <- subset(echosounder, depth < 40) echosounder <- decimate(echosounder, c(2, 40)) expect_equal("single-beam", echosounder[["beamType"]]) expect_equal(dim(echosounder[["a"]]), c(389, 54)) # START of 2023-06-24 block (important) # # Notice that I have commented-out next two tests, which I saw to fail today. # # These tests are not used officially (i.e. on CRAN). # I suspect they have not shown failing results lately because the data # file had been moved to the cloud and so the test was skipped. # # I am not too uncomfortable commenting out these # tests because they were only consistency tests, and perhaps something # has changed in the code for reading this form of echosounder data. If # I were working on echosounder data, I'd seek a way to independently determine # what the actual values are. At such a time, the tests could be revitalized # and perhaps changes made to the code. # #>expect_equal(echosounder[["a"]][10, 10:15], #> c(1101.6125, 818.9500, 892.3500, 1393.0625, 2320.9500, 5840.2750)) #>expect_equal(echosounder[["a"]][10:15, 10], #> c(1101.6125, 1164.5500, 875.3750, 842.5750, 959.6250, 1076.6500)) # # END of 2023-06-24 block expect_equal( head(echosounder[["time"]]), as.POSIXct( c( "2008-07-01 16:39:41.019", "2008-07-01 16:39:41.509", "2008-07-01 16:39:42.000", "2008-07-01 16:39:42.485", "2008-07-01 16:39:42.974", "2008-07-01 16:39:43.464" ), tz = "UTC" ) ) expect_equal(head(echosounder[["latitude"]]), c( 47.87948333, 47.87948333, 47.87948333, 47.87948825, 47.87949642, 47.87950000 ), tolerance = 1e-7 ) expect_equal(head(echosounder[["longitude"]]), c( -69.72364436, -69.72366061, -69.72367686, -69.72368808, -69.72369625, -69.72370900 ), tolerance = 1e-7 ) # expect_silent(plot(echosounder)) }) }