labbcat.url <- Sys.getenv('TEST_READ_LABBCAT_URL') username <- Sys.getenv('TEST_READ_LABBCAT_USERNAME') password <- Sys.getenv('TEST_READ_LABBCAT_PASSWORD') test_that("getMatchingTranscriptIds works", { skip_on_cran() # don't run tests that depend on external resource on CRAN if (!is.null(labbcatCredentials(labbcat.url, username, password))) skip("Server not available") ids <- getMatchingTranscriptIds(labbcat.url, "/^BR.+/.test(id)") expect_equal(length(ids), 5) expect_true("BR946_RodgerCurragh.eaf" %in% ids) expect_false("QB247_Jacqui.eaf" %in% ids) })