* using log directory ‘/srv/hornik/tmp/CRAN/nnR.Rcheck’ * using R Under development (unstable) (2024-02-05 r85863) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 17.0.6 (5) Debian flang-new version 17.0.6 (5) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘nnR/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘nnR’ version ‘0.1.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/3s] NOTE Maintainer: ‘Shakil Rafi ’ New submission Possibly misspelled words in DESCRIPTION: nnR (3:8) Found the following (possibly) invalid DOIs: DOI: s10444-022-09970-2 From: man/inst.Rd Message: Invalid DOI The Title field starts with the package name. Found the following URLs which should use \doi (with the DOI name only): File ‘comp.Rd’: https://doi.org/10.1007/s10444-022-09970-2 File ‘create_neural_network.Rd’: https://doi.org/10.1007/s10444-022-09970-2 File ‘is_nn.Rd’: https://doi.org/10.1007/s10444-022-09970-2 File ‘nn_sum.Rd’: https://doi.org/10.1007/s10444-022-09970-2 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘nnR’ can be installed ... [1s/1s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/3s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... NONE * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [145s/145s] OK Running ‘testthat.R’ [145s/145s] * checking PDF version of manual ... [4s/4s] WARNING LaTeX errors when creating PDF version. This typically indicates Rd problems. LaTeX errors found: ! Missing $ inserted. $ l.187 }{} ! Missing } inserted. } l.187 }{} ! Display math should end with $$. \tex_par:D l.187 }{} ! Extra }, or forgotten \endgroup. \par ...m \@noitemerr {\@@par }\fi \else {\@@par } \fi l.187 }{} ! LaTeX Error: Bad math environment delimiter. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ! Missing $ inserted. $ l.187 }{} ! Display math should end with $$. \endgroup l.187 }{} ! Missing $ inserted. $ l.292 }{} ! Missing } inserted. } l.292 }{} ! Display math should end with $$. \tex_par:D l.292 }{} ! Extra }, or forgotten \endgroup. \par ...m \@noitemerr {\@@par }\fi \else {\@@par } \fi l.292 }{} ! LaTeX Error: \mathsf allowed only in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ! Missing $ inserted. $ l.292 }{} ! Undefined control sequence. \par \mathsf {NN} = \bigcup _{L\in \N } \bigcup _{l_0,l_1,...,l_... l.292 }{} ! Undefined control sequence. ... } \bigcup _{l_0,l_1,...,l_L \in \N ^{L+1}} \left ( \times ^L_... l.292 }{} ! Missing $ inserted. $ l.292 }{} ! Missing } inserted. } l.292 }{} ! Extra }, or forgotten \endgroup. \par ...m \@noitemerr {\@@par }\fi \else {\@@par } \fi l.292 }{} ! LaTeX Error: Bad math environment delimiter. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ! Missing $ inserted. $ l.292 }{} ! Display math should end with $$. \endgroup l.292 }{} ! Undefined control sequence. \mathsf {NN} = \bigcup _{L\in \N } \bigcup _{l_0,l_1,...,l_L \in... l.630 }{} ! Undefined control sequence. ... } \bigcup _{l_0,l_1,...,l_L \in \N } \left ( \times ^L_{k=1} ... l.630 }{} ! Missing $ inserted. $ l.693 }{} ! Missing } inserted. } l.693 }{} ! Display math should end with $$. \tex_par:D l.693 }{} ! Extra }, or forgotten \endgroup. \par ...m \@noitemerr {\@@par }\fi \else {\@@par } \fi l.693 }{} ! LaTeX Error: Bad math environment delimiter. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ! Missing $ inserted. $ l.693 }{} ! Display math should end with $$. \endgroup l.693 }{} ! Undefined control sequence. \oplus ^v_{i=u}\nu _i \coloneqq \left ( \mathsf {Sum}_{v-u+1,\ma... l.732 }{} * checking PDF version of manual without index ... ERROR * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... NOTE Found the following files/directories: ‘nnR-manual.tex’ * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 WARNING, 2 NOTEs