* installing *source* package ‘nlmixr2extra’ ...
** using staged installation

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R> if (!dir.exists("data")) {
+   dir.create("data")
+ }
R> 
R> .in <- suppressWarnings(readLines("src/Makevars.in"))
R> if (.Platform$OS.type == "windows" && !file.exists("src/Makevars.win")) {
+   file.out <- file("src/Makevars.win", "wb")
+   writeLines(.in, file.out)
+   close(file.out)
+ } else {
+   file.out <- file("src/Makevars", "wb")
+   writeLines(.in, file.out)
+   close(file.out)
+ }
R> 
> proc.time()
   user  system elapsed 
  0.105   0.044   0.127 
--------[begin src/Makevars]--------
## -*- mode: makefile; -*-

PKG_CXXFLAGS = $(SHLIB_OPENMP_CXXFLAGS) -DARMA_USE_CXX11
PKG_LIBS = $(SHLIB_OPENMP_CXXFLAGS) $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS)
--------[end src/Makevars]--------
** libs
using C compiler: ‘Debian clang version 18.1.5 (2)’
using C++ compiler: ‘Debian clang version 18.1.5 (2)’
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_USE_CXX11 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:30:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
   26 | #define R_NO_REMAP
      |         ^
<command line>:5:9: note: previous definition is here
    5 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
clang-18  -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_USE_CXX11 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c preCondInv.cpp -o preCondInv.o
In file included from preCondInv.cpp:2:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:30:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
   26 | #define R_NO_REMAP
      |         ^
<command line>:5:9: note: previous definition is here
    5 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-18/lib -Wl,-O1 -o nlmixr2extra.so RcppExports.o init.o preCondInv.o -llapack -L/home/hornik/tmp/R-d-clang-18/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-18/lib -lR
installing to /srv/hornik/tmp/CRAN/nlmixr2extra.Rcheck/00LOCK-nlmixr2extra/00new/nlmixr2extra/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (nlmixr2extra)