model <- function() { ini({ foo <- 1 }) model({ bar <- foo bar ~ add(foo) }) } ui <- nlmixr(model) test_that(".foceiPreProcessData errors with missing info", { env_orig <- new.env() df_noid <- data.frame(DV=1:2, time=1:2) df_nodv <- data.frame(ID=1, time=1:2) df_notime <- data.frame(ID=1, DV=1:2) expect_error( .foceiPreProcessData(data = df_nodv, env = env_orig, ui = ui), regexp = "missing elements {'DV'}", fixed = TRUE ) expect_error( .foceiPreProcessData(data = df_notime, env = env_orig, ui = ui), regexp = "missing elements {'TIME'}", fixed = TRUE ) }) test_that(".foceiPreProcessData works with data.frame and tibble data", { env_orig <- new.env() df <- data.frame(ID=1, DV=1:2, time=1:2) .foceiPreProcessData(data = df, env = env_orig, ui = ui) expect_equal(env_orig$dataSav$nlmixrRowNums, c(NA, 1, 2)) tib <- tibble::tibble(ID=1, DV=1:2, time=1:2) .foceiPreProcessData(data = tib, env = env_orig, ui = ui) expect_equal(env_orig$dataSav$nlmixrRowNums, c(NA, 1, 2)) }) test_that(".foceiPreProcessData works with ID as character or factor", { env_orig <- new.env() df <- data.frame(ID=c("A", "B"), DV=1:2, time=1:2) .foceiPreProcessData(data = df, env = env_orig, ui = ui) expect_equal(env_orig$dataSav$ID, rep(1L:2L, each = 2)) # Confirm row order expect_equal(env_orig$dataSav$DV, c(NA, 1, NA, 2)) df <- data.frame(ID=factor(c("A", "B")), DV=3:4, time=1:2) .foceiPreProcessData(data = df, env = env_orig, ui = ui) expect_equal(env_orig$dataSav$ID, rep(1L:2L, each = 2)) # Confirm row order expect_equal(env_orig$dataSav$DV, c(NA, 3, NA, 4)) df <- data.frame(ID=factor(c("B", "A")), DV=5:6, time=1:2) .foceiPreProcessData(data = df, env = env_orig, ui = ui) # IDs are assigned in the order that they are found not in factor order expect_equal(env_orig$dataSav$ID, rep(1L:2L, each = 2)) # Confirm row order expect_equal(env_orig$dataSav$DV, c(NA, 5, NA, 6)) })