test_that("between session saem ll works", { src <- deparse(quote({ library(nlmixr2est) #nolint rxode2::rxClean() one.cmt <- function() { ini({ tka <- 0.45 tcl <- log(c(0, 2.7, 100)) tv <- 3.45 eta.ka ~ 0.6 eta.cl ~ 0.3 eta.v ~ 0.1 add.sd <- 0.7 }) model({ ka <- exp(tka + eta.ka) cl <- exp(tcl + eta.cl) v <- exp(tv + eta.v) linCmt() ~ add(add.sd) }) } fit <- nlmixr(one.cmt, theo_sd, est="saem", control=saemControl(print=0, nBurn = 1, nEm = 1)) saveRDS(fit, "fit.rds") })) src <- src[seq(2, length(src) - 1)] rds <- withr::with_tempdir({ writeLines(src, "000.R") .cmd <- file.path(R.home("bin"), "R") .args <- c("CMD", "BATCH", "000.R") .out <- sys::exec_internal(cmd = .cmd, args = .args, error = FALSE) message(paste(readLines(paste0("000.Rout")), collapse="\n")) readRDS("fit.rds") }) expect_true(is.numeric(rds$objf)) })