Package check result: OK

Changes to worse in reverse depends:

Package: BasketballAnalyzeR
Check: examples
New result: ERROR
  Running examples in ‘BasketballAnalyzeR-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: assistnet
  > ### Title: Investigates the network of assists-shots in a team
  > ### Aliases: assistnet
  > 
  > ### ** Examples
  > 
  > PbP <- PbPmanipulation(PbP.BDB)
  > PbP.GSW <- subset(PbP, team=="GSW")
  > out <- assistnet(PbP.GSW)
  Error in as.network(x = tbl, directed = TRUE, matrix.type = "adjacency",  : 
    could not find function "as.network"
  Calls: assistnet -> <Anonymous> -> eval.parent -> eval -> eval
  Execution halted

Package: btergm
Check: examples
New result: ERROR
  Running examples in ‘btergm-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: btergm
  > ### Title: Estimate a TERGM by MPLE with temporal bootstrapping
  > ### Aliases: btergm
  > 
  > ### ** Examples
  > 
  > set.seed(5)
  > 
  > networks <- list()
  > for (i in 1:10) {              # create 10 random networks with 10 actors
  +   mat <- matrix(rbinom(100, 1, .25), nrow = 10, ncol = 10)
  +   diag(mat) <- 0               # loops are excluded
  +   nw <- network::network(mat)  # create network object
  +   networks[[i]] <- nw          # add network to the list
  + }
  Error in as.network(x = mat) : could not find function "as.network"
  Calls: <Anonymous> -> eval.parent -> eval -> eval
  Execution halted

Package: btergm
Check: tests
New result: ERROR
    Running ‘testthat.R’ [3s/3s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library("testthat")
    > 
    > test_check("btergm")
    Loading required package: btergm
    Registered S3 methods overwritten by 'btergm':
      method    from
      plot.gof  ergm
      print.gof ergm
    Package:  btergm
    Version:  1.10.12
    Date:     2024-03-31
    Authors:  Philip Leifeld (University of Manchester)
              Skyler J. Cranmer (The Ohio State University)
              Bruce A. Desmarais (Pennsylvania State University)
    
    [ FAIL 3 | WARN 0 | SKIP 5 | PASS 0 ]
    
    ══ Skipped tests (5) ═══════════════════════════════════════════════════════════
    • On CRAN (5): 'test-data.R:4:3', 'test-interpret.R:4:3',
      'test-interpret.R:32:3', 'test-interpret.R:59:3', 'test-interpret.R:87:3'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-btergm.R:8:3'): (code run outside of `test_that()`) ────────────
    Error in `as.network(x = mat)`: could not find function "as.network"
    ── Error ('test-gof.R:9:5'): basic GOF functionality works ─────────────────────
    Error in `as.network(x = mat)`: could not find function "as.network"
    ── Error ('test-gof.R:41:5'): checkdegeneracy works with btergm and mtergm ─────
    Error in `as.network(x = mat)`: could not find function "as.network"
    
    [ FAIL 3 | WARN 0 | SKIP 5 | PASS 0 ]
    Error: Test failures
    Execution halted

Package: CINNA
Check: examples
New result: ERROR
  Running examples in ‘CINNA-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: calculate_centralities
  > ### Title: Centrality measure calculation
  > ### Aliases: calculate_centralities
  > 
  > ### ** Examples
  > 
  > data("zachary")
  > p <- proper_centralities(zachary)
  This graph was created by an old(er) igraph version.
  ℹ Call `igraph::upgrade_graph()` on it to use with the current igraph version.
  For now we convert it on the fly...
   [1] "subgraph centrality scores"                      
   [2] "Topological Coefficient"                         
   [3] "Average Distance"                                
   [4] "Barycenter Centrality"                           
   [5] "BottleNeck Centrality"                           
   [6] "Centroid value"                                  
   [7] "Closeness Centrality (Freeman)"                  
   [8] "ClusterRank"                                     
   [9] "Decay Centrality"                                
  [10] "Degree Centrality"                               
  [11] "Diffusion Degree"                                
  [12] "DMNC - Density of Maximum Neighborhood Component"
  [13] "Eccentricity Centrality"                         
  [14] "Harary Centrality"                               
  [15] "eigenvector centralities"                        
  [16] "K-core Decomposition"                            
  [17] "Geodesic K-Path Centrality"                      
  [18] "Katz Centrality (Katz Status Index)"             
  [19] "Kleinberg's authority centrality scores"         
  [20] "Kleinberg's hub centrality scores"               
  [21] "clustering coefficient"                          
  [22] "Lin Centrality"                                  
  [23] "Lobby Index (Centrality)"                        
  [24] "Markov Centrality"                               
  [25] "Radiality Centrality"                            
  [26] "Shortest-Paths Betweenness Centrality"           
  [27] "Current-Flow Closeness Centrality"               
  [28] "Closeness centrality (Latora)"                   
  [29] "Communicability Betweenness Centrality"          
  [30] "Community Centrality"                            
  [31] "Cross-Clique Connectivity"                       
  [32] "Entropy Centrality"                              
  [33] "EPC - Edge Percolated Component"                 
  [34] "Laplacian Centrality"                            
  [35] "Leverage Centrality"                             
  [36] "MNC - Maximum Neighborhood Component"            
  [37] "Hubbell Index"                                   
  [38] "Semi Local Centrality"                           
  [39] "Closeness Vitality"                              
  [40] "Residual Closeness Centrality"                   
  [41] "Stress Centrality"                               
  [42] "Load Centrality"                                 
  [43] "Flow Betweenness Centrality"                     
  [44] "Information Centrality"                          
  [45] "Dangalchev Closeness Centrality"                 
  [46] "Group Centrality"                                
  [47] "Harmonic Centrality"                             
  [48] "Local Bridging Centrality"                       
  [49] "Wiener Index Centrality"                         
  > calculate_centralities(zachary, include = "Degree Centrality")
  Error in as.network(x = y) : could not find function "as.network"
  Calls: calculate_centralities -> network -> eval.parent -> eval -> eval
  Execution halted

Package: CINNA
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘CINNA.Rmd’ using rmarkdown
  
  Quitting from lines 209-212 [unnamed-chunk-9] (CINNA.Rmd)
  Error: processing vignette 'CINNA.Rmd' failed with diagnostics:
  could not find function "as.network"
  --- failed re-building ‘CINNA.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘CINNA.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: EGAnet
Check: examples
New result: ERROR
  Running examples in ‘EGAnet-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: compare.EGA.plots
  > ### Title: Visually Compare Two or More 'EGAnet' plots
  > ### Aliases: compare.EGA.plots
  > 
  > ### ** Examples
  > 
  > # Obtain WMT-2 data
  > wmt <- wmt2[,7:24]
  > 
  > # Draw random samples of 300 cases
  > sample1 <- wmt[sample(1:nrow(wmt), 300),]
  > sample2 <- wmt[sample(1:nrow(wmt), 300),]
  > 
  > # Estimate EGAs
  > ega1 <- EGA(sample1)
  Error in (function (net, mode = "fruchtermanreingold", layout.par = NULL,  : 
    could not coerce net to a network object
  Calls: EGA ... basic_plot_setup -> silent_call -> capture.output -> withVisible
  Execution halted

Package: egor
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘egor_allbus.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/egor.Rcheck/vign_test/egor/vignettes/egor_allbus_files/figure-html/unnamed-chunk-11-1.png
  768x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 9054 bytes
  Input file size = 9144 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 6980
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 6980
  
  Output IDAT size = 6980 bytes (2074 bytes decrease)
  Output file size = 7058 bytes (2086 bytes = 22.81% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/egor.Rcheck/vign_test/egor/vignettes/egor_allbus_files/figure-html/unnamed-chunk-11-2.png
  768x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 11157 bytes
  Input file size = 11247 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 9421
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 9421
  
  Output IDAT size = 9421 bytes (1736 bytes decrease)
  Output file size = 9499 bytes (1748 bytes = 15.54% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/egor.Rcheck/vign_test/egor/vignettes/egor_allbus_files/figure-html/unnamed-chunk-12-1.png
  768x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 37022 bytes
  Input file size = 37148 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30166
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30166
  
  Output IDAT size = 30166 bytes (6856 bytes decrease)
  Output file size = 30244 bytes (6904 bytes = 18.59% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/egor.Rcheck/vign_test/egor/vignettes/egor_allbus_files/figure-html/unnamed-chunk-12-2.png
  768x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 35519 bytes
  Input file size = 35645 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28544
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28544
  
  Output IDAT size = 28544 bytes (6975 bytes decrease)
  Output file size = 28622 bytes (7023 bytes = 19.70% decrease)
  
  --- finished re-building ‘egor_allbus.Rmd’
  
  --- re-building ‘qualtrics.Rmd’ using rmarkdown
  --- finished re-building ‘qualtrics.Rmd’
  
  --- re-building ‘using_egor.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/egor.Rcheck/vign_test/egor/vignettes/using_egor_files/figure-html/unnamed-chunk-16-1.png
  288x288 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 15485 bytes
  Input file size = 15575 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11139
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11139
  
  Output IDAT size = 11139 bytes (4346 bytes decrease)
  Output file size = 11217 bytes (4358 bytes = 27.98% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/egor.Rcheck/vign_test/egor/vignettes/using_egor_files/figure-html/unnamed-chunk-16-2.png
  288x288 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 14835 bytes
  Input file size = 14925 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11462
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11462
  
  Output IDAT size = 11462 bytes (3373 bytes decrease)
  Output file size = 11540 bytes (3385 bytes = 22.68% decrease)
  
  
  Quitting from lines 250-253 [unnamed-chunk-17] (using_egor.Rmd)
  Error: processing vignette 'using_egor.Rmd' failed with diagnostics:
  could not find function "as.network"
  --- failed re-building ‘using_egor.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘using_egor.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: egor
Check: tests
New result: ERROR
    Running ‘testthat.R’ [22s/22s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(egor)
    Loading required package: dplyr
    
    Attaching package: 'dplyr'
    
    The following object is masked from 'package:testthat':
    
        matches
    
    The following objects are masked from 'package:stats':
    
        filter, lag
    
    The following objects are masked from 'package:base':
    
        intersect, setdiff, setequal, union
    
    Loading required package: tibble
    > library(dplyr)
    > 
    > test_check("egor")
    5 Egos/ Ego Networks 
    85 Alters 
    Min. Netsize 13 
    Average Netsize 17 
    Max. Netsize 22 
    Average Density 0.495955448060711 
    
    Ego sampling design:
    Independent Sampling design (with replacement)
    Called via srvyr
    Sampling variables:
      - ids: `1` 
      - weights: sampling_weight 
    Data variables: 
      - .egoID (dbl), sex (chr), age (fct), age.years (int), country (chr), income
        (dbl), sampling_weight (dbl), avg_nts (dbl)
    Alter survey design:
      Maximum nominations: Inf 
    5 Egos/ Ego Networks 
    85 Alters 
    Min. Netsize 13 
    Average Netsize 17 
    Max. Netsize 22 
    Average Density 0.495955448060711 
    
    Ego sampling design:
    Independent Sampling design (with replacement)
    Called via srvyr
    Sampling variables:
      - ids: `1` 
      - weights: sampling_weight 
    Data variables: 
      - .egoID (dbl), sex (chr), age (fct), age.years (int), country (chr), income
        (dbl), sampling_weight (dbl), avg_nts (dbl)
    Alter survey design:
      Maximum nominations: Inf 
    3 Egos/ Ego Networks 
    28 Alters 
    Min. Netsize 6 
    Average Netsize 9.33333333333333 
    Max. Netsize 15 
    Average Density 0.526984126984127 
    Alter survey design:
      Maximum nominations: Inf 
    32 Egos/ Ego Networks 
    384 Alters 
    Min. Netsize 12 
    Average Netsize 12 
    Max. Netsize 12 
    Average Density 0.5 
    
    Ego sampling design:
    Independent Sampling design (with replacement)
    Called via srvyr
    Data variables: 
      - .egoID (dbl), sex (fct), age (fct), age.years (int), country (chr), income
        (dbl), avg_nts (dbl)
    Alter survey design:
      Maximum nominations: Inf 
    5 Egos/ Ego Networks 
    16 Alters 
    Min. Netsize 4 
    Average Netsize 4 
    Max. Netsize 4 
    Average Density 1.33333333333333 
    Alter survey design:
      Maximum nominations: Inf 
    4 Egos/ Ego Networks 
    16 Alters 
    Min. Netsize 4 
    Average Netsize 4 
    Max. Netsize 4 
    Average Density 1.33333333333333 
    Alter survey design:
      Maximum nominations: Inf 
    Sorting data by egoID: Transforming alters data to long format: Transforming wide dyad data to edgelist: Sorting data by egoID: Transforming alters data to long format: Transforming wide dyad data to edgelist: Filtering out empty alter entries using provided network size values: Sorting data by egoID: Transforming alters data to long format: Transforming wide dyad data to edgelist: [ FAIL 6 | WARN 10 | SKIP 15 | PASS 201 ]
    
    ══ Skipped tests (15) ══════════════════════════════════════════════════════════
    • On CRAN (15): 'test-ei.R:3:11', 'test-ei.R:72:13', 'test-ei.R:85:13',
      'test-ei.R:95:13', 'test-ei.R:125:13', 'test-ei.R:141:3', 'test-ei.R:150:3',
      'test-ei.R:164:3', 'test-onefile_to_egor.R:5:3',
      'test-onefile_to_egor.R:35:3', 'test-onefile_to_egor.R:67:3',
      'test-twofiles_to_egor.R:2:3', 'test-twofiles_to_egor.R:34:3',
      'test-twofiles_to_egor.R:65:3', 'test-twofiles_to_egor.R:94:13'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-as_egor.R:31:3'): as.egor.list() works for network objects. ────
    Error in `as.network(x = mt, directed = FALSE)`: could not find function "as.network"
    Backtrace:
        ▆
     1. └─egor::as_network(...) at test-as_egor.R:31:3
     2.   └─base::mapply(FUN = network.data.frame, x$.aaties, x$.alts, SIMPLIFY = FALSE)
     3.     └─egor (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
    ── Failure ('test-conversions.R:3:13'): as_network works ───────────────────────
    `{ ... }` threw an error.
    Message: could not find function "as.network"
    Class:   simpleError/error/condition
    Backtrace:
        ▆
     1. ├─testthat::expect_error(...) at test-conversions.R:3:13
     2. │ └─testthat:::quasi_capture(...)
     3. │   ├─testthat (local) .capture(...)
     4. │   │ └─base::withCallingHandlers(...)
     5. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
     6. └─egor::as_network(egor32) at test-conversions.R:5:15
     7.   └─base::mapply(FUN = network.data.frame, x$.aaties, x$.alts, SIMPLIFY = FALSE)
     8.     └─egor (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
    ── Failure ('test-conversions.R:58:13'): as_network works. ─────────────────────
    default arguments threw an error.
    Message: could not find function "as.network"
    Class:   simpleError/error/condition
    Backtrace:
        ▆
     1. ├─testthat::expect_error(network::as.network(egor32), NA, label = "default arguments") at test-conversions.R:58:13
     2. │ └─testthat:::quasi_capture(...)
     3. │   ├─testthat (local) .capture(...)
     4. │   │ └─base::withCallingHandlers(...)
     5. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
     6. ├─network::as.network(egor32)
     7. └─egor:::as.network.egor(egor32)
     8.   └─base::mapply(FUN = network.data.frame, x$.aaties, x$.alts, SIMPLIFY = FALSE)
     9.     └─egor (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
    ── Failure ('test-conversions.R:63:13'): as_network works. ─────────────────────
    include.ego/ego.attrs/ego.alter.weights threw an error.
    Message: could not find function "as.network"
    Class:   simpleError/error/condition
    Backtrace:
        ▆
     1. ├─testthat::expect_error(...) at test-conversions.R:63:13
     2. │ └─testthat:::quasi_capture(...)
     3. │   ├─testthat (local) .capture(...)
     4. │   │ └─base::withCallingHandlers(...)
     5. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
     6. └─egor::as_network(...)
     7.   └─base::mapply(FUN = network.data.frame, x$.aaties, x$.alts, SIMPLIFY = FALSE)
     8.     └─egor (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
    ── Failure ('test-conversions.R:78:13'): as_network works with graph.attrs ─────
    `res <- as_network(x = egor32, graph.attrs = c(".egoID", "income"))` threw an error.
    Message: could not find function "as.network"
    Class:   simpleError/error/condition
    Backtrace:
        ▆
     1. ├─testthat::expect_error(...) at test-conversions.R:78:13
     2. │ └─testthat:::quasi_capture(...)
     3. │   ├─testthat (local) .capture(...)
     4. │   │ └─base::withCallingHandlers(...)
     5. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
     6. └─egor::as_network(x = egor32, graph.attrs = c(".egoID", "income"))
     7.   └─base::mapply(FUN = network.data.frame, x$.aaties, x$.alts, SIMPLIFY = FALSE)
     8.     └─egor (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
    ── Error ('test-conversions.R:81:13'): as_network works with graph.attrs ───────
    Error in `eval(code, test_env)`: object 'res' not found
    Backtrace:
        ▆
     1. ├─testthat::expect_true(all(c("income", ".egoID") %in% network::list.network.attributes(res[[1]]))) at test-conversions.R:81:13
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─c("income", ".egoID") %in% ...
     5. └─network::list.network.attributes(res[[1]])
    
    [ FAIL 6 | WARN 10 | SKIP 15 | PASS 201 ]
    Error: Test failures
    Execution halted

Package: ergmito
Check: examples
New result: ERROR
  Running examples in ‘ergmito-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: nvertex
  > ### Title: Utility functions to query network dimensions
  > ### Aliases: nvertex nedges nnets is_directed
  > 
  > ### ** Examples
  > 
  > set.seed(771)
  > net <- lapply(rbernoulli(c(4, 4)), network::network, directed = FALSE)
  Error in as.network(x = X[[i]], directed = FALSE) : 
    could not find function "as.network"
  Calls: lapply -> FUN -> eval.parent -> eval -> eval
  Execution halted
  Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
  count_stats 6.103  0.021   6.134

Package: FinNet
Check: examples
New result: ERROR
  Running examples in ‘FinNet-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: FF.net
  > ### Title: Easily represent a firm-firm (FF) network using the package
  > ###   'network'
  > ### Aliases: FF.net
  > 
  > ### ** Examples
  > 
  > # Create a nice network representation of the binary FF of
  > # Berkshire Hataway's holdings based on common ownership
  > data("firms_BKB")
  > x <- FF.naive.ownership(firms_BKB)
  > FF.net(x = x, aesthetic = 'nice')
  Error in as.network(x = M, directed = directed, hyper = FALSE, loops = loops,  : 
    could not find function "as.network"
  Calls: FF.net ... initialize -> <Anonymous> -> eval.parent -> eval -> eval
  Execution halted

Package: FinNet
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘analysis_examples.Rmd’ using knitr
  ** Processing: figure/workflow_1-1.png
  504x504 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 24934 bytes
  Input file size = 25048 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18101
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18101
  
  Output IDAT size = 18101 bytes (6833 bytes decrease)
  Output file size = 18179 bytes (6869 bytes = 27.42% decrease)
  
  --- finished re-building ‘analysis_examples.Rmd’
  
  --- re-building ‘workflow-igraph_financial.Rmd’ using knitr
  ** Processing: figure/workflow_5-1.png
  504x504 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 31841 bytes
  Input file size = 31955 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25895
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25895
  
  Output IDAT size = 25895 bytes (5946 bytes decrease)
  Output file size = 25973 bytes (5982 bytes = 18.72% decrease)
  
  --- finished re-building ‘workflow-igraph_financial.Rmd’
  
  --- re-building ‘workflow-network_financial.Rmd’ using knitr
  
  Quitting from lines 70-72 [workflow_4] (workflow-network_financial.Rmd)
  Error: processing vignette 'workflow-network_financial.Rmd' failed with diagnostics:
  could not find function "as.network"
  --- failed re-building ‘workflow-network_financial.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘workflow-network_financial.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: genBaRcode
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘genBaRcode_GUI_Vignette.Rmd’ using rmarkdown
  --- finished re-building ‘genBaRcode_GUI_Vignette.Rmd’
  
  --- re-building ‘genBaRcode_Vignette.Rmd’ using rmarkdown
  
  Quitting from lines 655-658 [unnamed-chunk-43] (genBaRcode_Vignette.Rmd)
  Error: processing vignette 'genBaRcode_Vignette.Rmd' failed with diagnostics:
  could not find function "as.network"
  --- failed re-building ‘genBaRcode_Vignette.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘genBaRcode_Vignette.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: GGMncv
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘cpu_time.Rmd’ using rmarkdown
  --- finished re-building ‘cpu_time.Rmd’
  
  --- re-building ‘high_dim.Rmd’ using rmarkdown
  
  Quitting from lines 76-78 [unnamed-chunk-4] (high_dim.Rmd)
  Error: processing vignette 'high_dim.Rmd' failed with diagnostics:
  could not find function "as.network"
  --- failed re-building ‘high_dim.Rmd’
  
  --- re-building ‘nct_custom.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/GGMncv.Rcheck/vign_test/GGMncv/vignettes/nct_custom_files/figure-html/unnamed-chunk-3-1.png
  288x288 pixels, 8 bits/pixel, 256 colors in palette
  Reducing image to 8 bits/pixel, grayscale
  Input IDAT size = 5457 bytes
  Input file size = 6315 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 5054
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 5054
  
  Output IDAT size = 5054 bytes (403 bytes decrease)
  Output file size = 5132 bytes (1183 bytes = 18.73% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/GGMncv.Rcheck/vign_test/GGMncv/vignettes/nct_custom_files/figure-html/unnamed-chunk-6-1.png
  288x288 pixels, 8 bits/pixel, 256 colors in palette
  Reducing image to 8 bits/pixel, grayscale
  Input IDAT size = 5094 bytes
  Input file size = 5952 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 4676
    zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 4675
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 4675
  
  Output IDAT size = 4675 bytes (419 bytes decrease)
  Output file size = 4753 bytes (1199 bytes = 20.14% decrease)
  
  --- finished re-building ‘nct_custom.Rmd’
  
  --- re-building ‘null_dist.Rmd’ using rmarkdown
  --- finished re-building ‘null_dist.Rmd’
  
  --- re-building ‘sign_restrict.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/GGMncv.Rcheck/vign_test/GGMncv/vignettes/sign_restrict_files/figure-html/unnamed-chunk-2-1.png
  288x288 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 18912 bytes
  Input file size = 19014 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16885
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16885
  
  Output IDAT size = 16885 bytes (2027 bytes decrease)
  Output file size = 16963 bytes (2051 bytes = 10.79% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/GGMncv.Rcheck/vign_test/GGMncv/vignettes/sign_restrict_files/figure-html/unnamed-chunk-3-1.png
  288x288 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 34537 bytes
  Input file size = 34663 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28050
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28050
  
  Output IDAT size = 28050 bytes (6487 bytes decrease)
  Output file size = 28128 bytes (6535 bytes = 18.85% decrease)
  
  
  Quitting from lines 62-72 [unnamed-chunk-4] (sign_restrict.Rmd)
  Error: processing vignette 'sign_restrict.Rmd' failed with diagnostics:
  could not find function "as.network"
  --- failed re-building ‘sign_restrict.Rmd’
  
  SUMMARY: processing the following files failed:
    ‘high_dim.Rmd’ ‘sign_restrict.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: GGMnonreg
Check: examples
New result: ERROR
  Running examples in ‘GGMnonreg-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: plot.graph
  > ### Title: Network Plot for 'graph' Objects
  > ### Aliases: plot.graph
  > 
  > ### ** Examples
  > 
  > # data
  > Y <- ptsd
  > 
  > # estimate graph
  > fit <- ggm_inference(Y, boot = FALSE)
  > 
  > # get info for plotting
  > plot(get_graph(fit))
  Error in as.network(x = x$pcor_adj) : 
    could not find function "as.network"
  Calls: plot ... plot.graph -> <Anonymous> -> eval.parent -> eval -> eval
  Execution halted

Package: ggnetwork
Check: tests
New result: ERROR
    Running ‘testthat.R’ [3s/3s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(ggnetwork)
    Loading required package: ggplot2
    > 
    > test_check("ggnetwork")
    [ FAIL 2 | WARN 6 | SKIP 0 | PASS 36 ]
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-fortify-network.R:3:1'): (code run outside of `test_that()`) ───
    Error in `as.network(x = flo, directed = FALSE)`: could not find function "as.network"
    ── Error ('test-ggnetwork.R:59:3'): ggnetwork works ────────────────────────────
    Error in `as.network(x = n, multiple = TRUE)`: could not find function "as.network"
    
    [ FAIL 2 | WARN 6 | SKIP 0 | PASS 36 ]
    Error: Test failures
    Execution halted

Package: inferCSN
Check: examples
New result: ERROR
  Running examples in ‘inferCSN-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: plot_dynamic_networks
  > ### Title: Plot dynamic networks
  > ### Aliases: plot_dynamic_networks
  > 
  > ### ** Examples
  > 
  > data("example_matrix")
  > network <- inferCSN(example_matrix)[1:100, ]
  ✔ Running for <matrix>.
  ✔ Checking input parameters.
  ✔ Using L0 sparse regression model.
  ✔ Using 1 core.
  ✔ Run done.
  > network$celltype <- c(
  +   rep("cluster1", 20),
  +   rep("cluster2", 20),
  +   rep("cluster3", 20),
  +   rep("cluster5", 20),
  +   rep("cluster6", 20)
  + )
  > 
  > celltypes_order <- c(
  +   "cluster5", "cluster3",
  +   "cluster2", "cluster1",
  +   "cluster6"
  + )
  > 
  > plot_dynamic_networks(
  +   network,
  +   celltypes_order = celltypes_order
  + )
  Error in as.network(x = dedges, directed = TRUE, multiple = TRUE, matrix.type = "edgelist",  : 
    could not find function "as.network"
  Calls: plot_dynamic_networks -> <Anonymous> -> eval.parent -> eval -> eval
  Execution halted

Package: intergraph
Check: tests
New result: ERROR
    Running ‘testthat.R’ [3s/3s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(intergraph)
    > 
    > test_check("intergraph")
    [ FAIL 1 | WARN 3 | SKIP 1 | PASS 53 ]
    
    ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
    • On CRAN (1): 'test-netcompare.R:5:3'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-asIgraph.R:97:3'): Conversion of bipartite networks is not yet supported ──
    Error in `as.network(x = t(m), directed = FALSE, bipartite = TRUE)`: could not find function "as.network"
    
    [ FAIL 1 | WARN 3 | SKIP 1 | PASS 53 ]
    Error: Test failures
    Execution halted

Package: interplex
Check: examples
New result: ERROR
  Running examples in ‘interplex-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: as_network
  > ### Title: Coerce objects to class 'network'
  > ### Aliases: as_network as_network.default as_network.Rcpp_SimplexTree
  > ###   as_network.gudhi.simplex_tree.SimplexTree as_network.igraph
  > ###   as_network.network
  > 
  > ### ** Examples
  > 
  > if (requireNamespace("TDA", quietly = TRUE)) {
  +   # convert a TDA filtration object
  +   t <- 2 * pi * c(0, 1, 3, 6) / 7
  +   rf <- TDA::ripsFiltration(
  +     cbind(x = cos(t), y = sin(t)),
  +     maxdimension = 2L, maxscale = 1.7
  +   )
  +   print(rf$cmplx)
  +   nw_rf <- as_network(rf)
  +   print(nw_rf)
  +   nw_rf2 <- as_network(rf$cmplx)
  +   print(nw_rf2)
  + }
  [[1]]
  [1] 1
  
  [[2]]
  [1] 2
  
  [[3]]
  [1] 3
  
  [[4]]
  [1] 4
  
  [[5]]
  [1] 2 1
  
  [[6]]
  [1] 4 1
  
  [[7]]
  [1] 3 2
  
  [[8]]
  [1] 4 2
  
  [[9]]
  [1] 4 2 1
  
  Warning in ensure_cmplx(x) :
    Taking `cmplx` element as the simplicial complex.
  Error in as.network(x = x_el, directed = FALSE, hyper = FALSE, loops = FALSE,  : 
    could not find function "as.network"
  Calls: as_network ... as_network.default -> <Anonymous> -> eval.parent -> eval -> eval
  Execution halted

Package: netmap
Check: examples
New result: ERROR
  Running examples in ‘netmap-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: ggcentrality
  > ### Title: Calculate centrality indices for vertices linked to a sf object
  > ### Aliases: ggcentrality
  > 
  > ### ** Examples
  > 
  > net=network::network(matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 1, 0, 0), nrow=4, byrow=TRUE))
  Error in as.network(x = matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0,  : 
    could not find function "as.network"
  Calls: <Anonymous> -> eval.parent -> eval -> eval
  Execution halted

Package: netmap
Check: tests
New result: ERROR
    Running ‘testthat.R’ [2s/2s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(netmap)
    > 
    > test_check("netmap")
    Lookup table is ambiguous (duplicate entries in at least one column)
    Empty cells in lookup table
    Empty cells in lookup table
    id or vertex.names not found in lookup table
    Invalid network/igraph object supplied
    [ FAIL 9 | WARN 7 | SKIP 0 | PASS 8 ]
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-ggcentrality.R:2:3'): ggcentrality returns a sf object with 3 more columns with centrality measures ──
    Error in `as.network(x = matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 
        1, 0, 0), nrow = 4, byrow = TRUE))`: could not find function "as.network"
    ── Error ('test-ggcentrality.R:19:3'): ggconn_area returns the correct connected areas for a network object ──
    Error in `as.network(x = matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 
        1, 0, 0), nrow = 4, byrow = TRUE))`: could not find function "as.network"
    ── Error ('test-ggnetmap.R:2:3'): ggnetmap produces the expected fortified data frame with lookup table ──
    Error in `as.network(x = matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 
        1, 0, 0), nrow = 4, byrow = TRUE))`: could not find function "as.network"
    ── Error ('test-ggnetmap.R:41:3'): ggnetmap produces the expected fortified data frame without lookup table ──
    Error in `as.network(x = matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 
        1, 0, 0), nrow = 4, byrow = TRUE))`: could not find function "as.network"
    ── Error ('test-link_network_map.R:2:3'): link_network_map works without lookup table ──
    Error in `as.network(x = matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 
        1, 0, 0), nrow = 4, byrow = TRUE))`: could not find function "as.network"
    ── Error ('test-link_network_map.R:14:3'): link_network_map works with a lookup table ──
    Error in `as.network(x = matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 
        1, 0, 0), nrow = 4, byrow = TRUE))`: could not find function "as.network"
    ── Error ('test-link_network_map.R:27:3'): is_* functions recognize objects of the class they test for ──
    Error in `as.network(x = matrix(1))`: could not find function "as.network"
    ── Error ('test-netmap_plot.R:2:3'): netmap_plot draws a plot ──────────────────
    Error in `as.network(x = matrix(c(0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 
        1, 0, 0), nrow = 4, byrow = TRUE))`: could not find function "as.network"
    ── Error ('test-reduce_to_map.R:6:3'): simple network reduced from 4 to 2 vertices ──
    Error in `as.network(x = matrix(c(0, 1, 1, 1, 0, 0, 0, 1, 1, 0, 0, 0, 1, 
        0, 1, 0)), nrow = 4, ncol = 4, byrow = TRUE)`: could not find function "as.network"
    
    [ FAIL 9 | WARN 7 | SKIP 0 | PASS 8 ]
    Error: Test failures
    Execution halted

Package: networkLite
Check: tests
New result: ERROR
    Running ‘test-all.R’ [27s/27s]
  Running the tests in ‘tests/test-all.R’ failed.
  Complete output:
    > library(testthat)
    > test_check("networkLite")
    Loading required package: networkLite
    Loading required package: network
    
    'network' 1.19.0 (2024-12-06), part of the Statnet Project
    * 'news(package="network")' for changes since last version
    * 'citation("network")' for citation information
    * 'https://statnet.org' for help, support, and other information
    
    [ FAIL 12 | WARN 7 | SKIP 0 | PASS 3034 ]
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 94) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 43) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 94) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 43) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 94) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 43) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 98) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 41) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 98) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 41) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 98) differ >
    ...
    ── Failure ('test-networkLite.R:683:11'): network and networkLite produce identical matrices, edgelists, and tibbles ──
    `tbl` not identical to tibble::as_tibble(nwL, attrname = attrname, na.rm = na.rm).
    Attributes: < Names: 4 string mismatches >
    Attributes: < Length mismatch: comparison on first 4 components >
    Attributes: < Component 1: Modes: logical, character >
    Attributes: < Component 1: Lengths: 1, 3 >
    Attributes: < Component 1: target is logical, current is character >
    Attributes: < Component 2: Modes: character, numeric >
    Attributes: < Component 2: Lengths: 3, 1 >
    Attributes: < Component 2: target is character, current is numeric >
    Attributes: < Component 3: Numeric: lengths (1, 41) differ >
    ...
    
    [ FAIL 12 | WARN 7 | SKIP 0 | PASS 3034 ]
    Error: Test failures
    Execution halted

Package: pulsar
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘other-criteria.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/pulsar.Rcheck/vign_test/pulsar/vignettes/other-criteria_files/figure-html/unnamed-chunk-3-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 25099 bytes
  Input file size = 25213 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 22500
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 22500
  
  Output IDAT size = 22500 bytes (2599 bytes decrease)
  Output file size = 22578 bytes (2635 bytes = 10.45% decrease)
  
  
  Quitting from lines 97-121 [unnamed-chunk-5] (other-criteria.Rmd)
  Error: processing vignette 'other-criteria.Rmd' failed with diagnostics:
  could not find function "as.network"
  --- failed re-building ‘other-criteria.Rmd’
  
  --- re-building ‘pulsar.Rmd’ using rmarkdown
  --- finished re-building ‘pulsar.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘other-criteria.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: rgraph6
Check: examples
New result: ERROR
  Running examples in ‘rgraph6-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: as_digraph6
  > ### Title: Encode network data as 'digraph6' symbols
  > ### Aliases: as_digraph6 as_digraph6.matrix as_digraph6.igraph
  > ###   as_digraph6.network as_digraph6.list as_digraph6.default
  > 
  > ### ** Examples
  > 
  > # From adjacency matrix ----------------------------------------------------
  > am <- matrix(c(
  +   0,1,0,
  +   0,0,1,
  +   1,0,0),
  +   byrow=TRUE, ncol=3, nrow=3)
  > as_digraph6(am)
  [1] "&BP_"
  > 
  > # From igraph objects ------------------------------------------------------
  > if(requireNamespace("igraph", quietly=TRUE)) {
  +   g <- igraph::graph_from_adjacency_matrix(am)
  +   as_digraph6(g)
  + }
  [1] "&BP_"
  > 
  > # From network objects -----------------------------------------------------
  > if(requireNamespace("network", quietly=TRUE)) {
  +   net <- network::network(am)
  +   as_digraph6(net)
  + }
  Error in as.network(x = am) : could not find function "as.network"
  Calls: <Anonymous> -> eval.parent -> eval -> eval
  Execution halted