* using log directory 'd:/RCompile/CRANincoming/R-devel/networkR.Rcheck'
* using R Under development (unstable) (2025-09-16 r88844 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'networkR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'networkR' version '0.1.4'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... OK
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'networkR' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 14.2.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... NOTE
Registration problems:
  symbol '_networkR_make_family_id' not in namespace:
   .Call(`_networkR_make_family_id`, id, fid, mid)
  symbol '_networkR_make_parental_chain' not in namespace:
   .Call(`_networkR_make_parental_chain`, id, fid, mid)
See chapter 'System and foreign language interfaces' in the 'Writing R
Extensions' manual.
* checking R code for possible problems ... NOTE
make_family_id: no visible binding for global variable
  '_networkR_make_family_id'
make_parental_chain: no visible binding for global variable
  '_networkR_make_parental_chain'
Undefined global functions or variables:
  _networkR_make_family_id _networkR_make_parental_chain
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... ERROR
Running examples in 'networkR-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: make_family_id
> ### Title: Construct family id vector from pedigree trio information
> ### Aliases: make_family_id
> ### Keywords: manip
> 
> ### ** Examples
> 
> 
> id <- 1:11
> fid <- c(NA, NA, 1, 1, NA, 23, 45, 5, 5, 7, NA)
> mid <- c(NA, NA, 2, 2, 65, NA, 46, 6, 6, 6, 0)
> make_family_id(id, fid, mid)
Error in make_family_id(id, fid, mid) : 
  object '_networkR_make_family_id' not found
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... ERROR
  Running 'testthat.R'
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(networkR)
  > 
  > test_check("networkR")
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 11 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('testtrios.R:8:5'): identify family clusters ─────────────────────────
  Error in `make_family_id(id, fid, mid)`: object '_networkR_make_family_id' not found
  Backtrace:
      ▆
   1. └─networkR::make_family_id(id, fid, mid) at testtrios.R:8:5
  ── Error ('testtrios.R:27:5'): identify parental chains ────────────────────────
  Error in `make_parental_chain(id, fid, mid)`: object '_networkR_make_parental_chain' not found
  Backtrace:
      ▆
   1. └─networkR::make_parental_chain(id, fid, mid) at testtrios.R:27:5
  
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 11 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... [15s] OK
* checking HTML version of manual ... OK
* DONE
Status: 2 ERRORs, 2 NOTEs