Package: fragility
Check: Rd cross-references
New result: WARNING
  Missing link(s) in Rd file 'frag.nma.Rd':
    ‘[netmeta]{pairwise}’
  
  Missing link(s) in Rd file 'frag.nma.alpha.Rd':
    ‘[netmeta]{pairwise}’
  
  See section 'Cross-references' in the 'Writing R Extensions' manual.

Package: metadat
Check: Rd cross-references
New result: WARNING
  Missing link(s) in Rd file 'dat.baker2009.Rd':
    ‘[netmeta]{pairwise}’
  
  Missing link(s) in Rd file 'dat.dogliotti2014.Rd':
    ‘[netmeta]{pairwise}’
  
  Missing link(s) in Rd file 'dat.dong2013.Rd':
    ‘[netmeta]{pairwise}’
  
  Missing link(s) in Rd file 'dat.gurusamy2011.Rd':
    ‘[netmeta]{pairwise}’
  
  Missing link(s) in Rd file 'dat.linde2015.Rd':
    ‘[netmeta]{pairwise}’
  
  Missing link(s) in Rd file 'dat.stowe2010.Rd':
    ‘[netmeta]{pairwise}’
  
  See section 'Cross-references' in the 'Writing R Extensions' manual.

Package: nmadb
Check: dependencies in R code
New result: WARNING
  Missing or unexported object: ‘netmeta::pairwise’

Package: nmadb
Check: examples
New result: ERROR
  Running examples in ‘nmadb-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: runnetmeta
  > ### Title: Run 'netmeta'
  > ### Aliases: runnetmeta
  > 
  > ### ** Examples
  > 
  > ## Not run: 
  > ##D   Conduct random effects network meta-analysis 
  > ##D   in a random network with continuous outcome
  > ## End(Not run)
  > cid <- 501427
  > netc <- readByID(cid)
  [1] "getting dataset:" "501427"          
  New names:
  • `` -> `...7`
  • `` -> `...8`
  • `` -> `...11`
  > ## Not run: get type and effect
  > netc$type
  [1] "continuous"
  > netc$effect
  [1] "MD"
  > ## Not run: In order to run netmeta but get "SMD" summary effects instead
  > runnetmeta(recid=cid, measure="SMD")
  [1] "getting dataset:" "501427"          
  New names:
  • `` -> `...7`
  • `` -> `...8`
  • `` -> `...11`
  Error: 'pairwise' is not an exported object from 'namespace:netmeta'
  Execution halted

Package: NMAoutlier
Check: examples
New result: ERROR
  Running examples in ‘NMAoutlier-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: NMAoutlier.measures
  > ### Title: Outlier and influential detection measures in network
  > ###   meta-analysis.
  > ### Aliases: NMAoutlier.measures
  > 
  > ### ** Examples
  > 
  > data(smokingcessation, package = "netmeta")
  > smokingcessation$id <- 1:nrow(smokingcessation)
  > 
  > study912 <- subset(smokingcessation, id %in% 9:12)
  > p1 <- netmeta::pairwise(list(treat1, treat2, treat3),
  +                         list(event1, event2, event3),
  +                         list(n1, n2, n3),
  +                         data = study912,
  +                         sm = "OR")
  Error: 'pairwise' is not an exported object from 'namespace:netmeta'
  Execution halted

Package: nmarank
Check: tests
New result: ERROR
    Running ‘testthat.R’ [53s/53s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(nmarank)
    Loading required package: meta
    Loading required package: metadat
    Loading 'meta' package (version 8.0-1).
    Type 'help(meta)' for a brief overview.
    Loading required package: netmeta
    Loading 'netmeta' package (version 3.0-2).
    Type 'help("netmeta-package")' for a brief overview.
    > 
    > test_check("nmarank")
    [ FAIL 1 | WARN 0 | SKIP 0 | PASS 10 ]
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-arm.R:185:3'): arm gives correct probs ───────────────────────
    abs(p1 - p2) is not less than 0.02. Difference: 0.0002
    
    [ FAIL 1 | WARN 0 | SKIP 0 | PASS 10 ]
    Error: Test failures
    Execution halted

Package: ssifs
Check: examples
New result: ERROR
  Running examples in ‘ssifs-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: smokingcessation
  > ### Title: Stochastic Search Inconsistency Factor Selection of
  > ###   interventions for smoking cessation
  > ### Aliases: smokingcessation
  > 
  > ### ** Examples
  > 
  > data(smokingcessation)
  > 
  > # Transform data from arm-based format to contrast-based format
  > 
  > smokingcessation$id <- 1:dim(smokingcessation)[1]
  > smoking.pair <- netmeta::pairwise(
  +   treat = list(treat1, treat2, treat3),
  +   event = list(event1, event2, event3),
  +   n = list(n1, n2, n3),
  +   studlab = id,
  +   data = smokingcessation,
  +   sm = "OR"
  + )
  Error: 'pairwise' is not an exported object from 'namespace:netmeta'
  Execution halted

Package: tracenma
Check: Rd cross-references
New result: WARNING
  Missing link(s) in Rd file 'get.dataset.Rd':
    ‘[netmeta:pairwise]{pairwise}’
  
  See section 'Cross-references' in the 'Writing R Extensions' manual.