* using log directory 'd:/RCompile/CRANincoming/R-devel/nestedLogit.Rcheck' * using R Under development (unstable) (2026-03-04 r89536 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * current time: 2026-03-05 19:25:30 UTC * checking for file 'nestedLogit/DESCRIPTION' ... OK * this is package 'nestedLogit' version '0.4.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... OK * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'nestedLogit' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [13s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [14s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK Running 'spelling.R' Running 'testthat.R' * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [33s] ERROR Error(s) in re-building vignettes: --- re-building 'ggeffects.Rmd' using rmarkdown --- finished re-building 'ggeffects.Rmd' --- re-building 'nestedLogit.Rmd' using rmarkdown --- finished re-building 'nestedLogit.Rmd' --- re-building 'other-examples.Rmd' using rmarkdown Quitting from other-examples.Rmd:504-508 [fishing-plot] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `xtfrm.data.frame()`: ! cannot xtfrm data frames --- Backtrace: ▆ 1. ├─base::plot(...) 2. └─nestedLogit:::plot.nestedLogit(...) 3. ├─base::sort(unique(data[, x.var])) 4. └─base::sort.default(unique(data[, x.var])) 5. ├─x[order(x, na.last = na.last, decreasing = decreasing)] 6. ├─tibble:::`[.tbl_df`(x, order(x, na.last = na.last, decreasing = decreasing)) 7. └─base::order(x, na.last = na.last, decreasing = decreasing) 8. └─base::lapply(z, function(x) if (is.object(x)) as.vector(xtfrm(x)) else x) 9. └─base (local) FUN(X[[i]], ...) 10. ├─base::as.vector(xtfrm(x)) 11. ├─base::xtfrm(x) 12. └─base::xtfrm.data.frame(x) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'other-examples.Rmd' failed with diagnostics: cannot xtfrm data frames --- failed re-building 'other-examples.Rmd' --- re-building 'plotting-ggplot.Rmd' using rmarkdown --- finished re-building 'plotting-ggplot.Rmd' --- re-building 'standard-errors.Rmd' using rmarkdown --- finished re-building 'standard-errors.Rmd' SUMMARY: processing the following file failed: 'other-examples.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR