downloading reverse dependencies ... downloading ecocomDP_1.3.2.tar.gz ... ok downloading NEONiso_0.7.2.tar.gz ... ok downloading neonPlantEcology_1.6.1.tar.gz ... ok downloading neonSoilFlux_1.0.0.tar.gz ... ok downloading neonOS_1.1.0.tar.gz ... ok downloading neonstore_0.5.1.tar.gz ... ok downloading Z10_0.1.0.tar.gz ... ok installing dependencies ‘duckdbfs’, ‘EML’, ‘emld’, ‘metScanR’, ‘neonOS’, ‘neonUtilities’, ‘reader’, ‘ritis’, ‘rnoaa’, ‘RNRCS’, ‘taxize’, ‘thor’, ‘usmap’, ‘worrms’ Warning: packages ‘RNRCS’, ‘metScanR’, ‘rnoaa’ are not available for this version of R Versions of these packages for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘WikidataQueryServiceR’, ‘WikidataR’, ‘NCmisc’, ‘solrium’, ‘rredlist’, ‘rotl’, ‘natserv’, ‘wikitaxa’, ‘usmapdata’ begin installing package ‘WikidataQueryServiceR’ begin installing package ‘NCmisc’ begin installing package ‘solrium’ begin installing package ‘rredlist’ begin installing package ‘rotl’ begin installing package ‘natserv’ begin installing package ‘usmapdata’ begin installing package ‘emld’ begin installing package ‘neonUtilities’ begin installing package ‘neonOS’ begin installing package ‘worrms’ begin installing package ‘thor’ begin installing package ‘duckdbfs’ * installing *source* package ‘WikidataQueryServiceR’ ... ** this is package ‘WikidataQueryServiceR’ version ‘1.0.0’ ** package ‘WikidataQueryServiceR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (WikidataQueryServiceR) begin installing package ‘WikidataR’ * installing *source* package ‘worrms’ ... ** this is package ‘worrms’ version ‘0.4.3’ ** package ‘worrms’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (worrms) * installing *source* package ‘duckdbfs’ ... ** this is package ‘duckdbfs’ version ‘0.1.1’ ** package ‘duckdbfs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (duckdbfs) * installing *source* package ‘usmapdata’ ... ** this is package ‘usmapdata’ version ‘0.6.0’ ** package ‘usmapdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (usmapdata) begin installing package ‘usmap’ * installing *source* package ‘neonOS’ ... ** this is package ‘neonOS’ version ‘1.1.0’ ** package ‘neonOS’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (neonOS) * installing *source* package ‘rredlist’ ... ** this is package ‘rredlist’ version ‘1.0.0’ ** package ‘rredlist’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rredlist) * installing *source* package ‘natserv’ ... ** this is package ‘natserv’ version ‘1.0.0’ ** package ‘natserv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (natserv) * installing *source* package ‘emld’ ... ** this is package ‘emld’ version ‘0.5.1’ ** package ‘emld’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (emld) begin installing package ‘EML’ * installing *source* package ‘NCmisc’ ... ** this is package ‘NCmisc’ version ‘1.2.0’ ** package ‘NCmisc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NCmisc) begin installing package ‘reader’ * installing *source* package ‘usmap’ ... ** this is package ‘usmap’ version ‘0.8.0’ ** package ‘usmap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (usmap) * installing *source* package ‘rotl’ ... ** this is package ‘rotl’ version ‘3.1.0’ ** package ‘rotl’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rotl) * installing *source* package ‘reader’ ... ** this is package ‘reader’ version ‘1.0.6’ ** package ‘reader’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reader) * installing *source* package ‘solrium’ ... ** this is package ‘solrium’ version ‘1.2.0’ ** package ‘solrium’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (solrium) begin installing package ‘ritis’ * installing *source* package ‘WikidataR’ ... ** this is package ‘WikidataR’ version ‘2.3.3’ ** package ‘WikidataR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (WikidataR) begin installing package ‘wikitaxa’ * installing *source* package ‘neonUtilities’ ... ** this is package ‘neonUtilities’ version ‘3.0.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (neonUtilities) * installing *source* package ‘thor’ ... ** this is package ‘thor’ version ‘1.2.0’ ** package ‘thor’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpp4mSMl/R.INSTALL3861e2446e5dd8/thor/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lmdb/mdb.c -o lmdb/mdb.o lmdb/mdb.c: In function ‘mdb_page_dirty’: lmdb/mdb.c:2384:13: warning: variable ‘rc’ set but not used [-Wunused-but-set-variable] 2384 | int rc, (*insert)(MDB_ID2L, MDB_ID2 *); | ^~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lmdb/midl.c -o lmdb/midl.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registration.c -o registration.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c thor.c -o thor.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c util.c -o util.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o thor.so lmdb/mdb.o lmdb/midl.o registration.o thor.o util.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpp4mSMl/R.INSTALL3861e2446e5dd8/thor/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-thor/00new/thor/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (thor) * installing *source* package ‘wikitaxa’ ... ** this is package ‘wikitaxa’ version ‘0.4.0’ ** package ‘wikitaxa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wikitaxa) * installing *source* package ‘EML’ ... ** this is package ‘EML’ version ‘2.0.6.1’ ** package ‘EML’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EML) * installing *source* package ‘ritis’ ... ** this is package ‘ritis’ version ‘1.0.0’ ** package ‘ritis’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ritis) begin installing package ‘taxize’ * installing *source* package ‘taxize’ ... ** this is package ‘taxize’ version ‘0.10.0’ ** package ‘taxize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (taxize) checking neonUtilities_3.0.0.tar.gz ... checking ecocomDP_1.3.2.tar.gz ... checking NEONiso_0.7.2.tar.gz ... checking neonPlantEcology_1.6.1.tar.gz ... checking neonSoilFlux_1.0.0.tar.gz ... checking neonOS_1.1.0.tar.gz ... checking neonstore_0.5.1.tar.gz ... checking Z10_0.1.0.tar.gz ... Depends: Package: neonUtilities Depends: R (>= 3.6) Imports: httr, jsonlite, jose, downloader, data.table, utils, R.utils, stats, tidyr, dplyr, pbapply, parallel, curl, arrow, rlang Timings: user system elapsed neonUtilities 40.234 3.662 46.886 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 3 4 Check results summary: neonUtilities ... OK rdepends_ecocomDP ... OK rdepends_NEONiso ... OK rdepends_neonOS ... OK rdepends_neonPlantEcology ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_neonSoilFlux ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_neonstore ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_Z10 ... OK Check results changes: Package: Z10 Check: CRAN incoming feasibility Old result: NOTE