testthat::test_that("syncope_01 produces expected results", { # Synthetic test data test_data <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), epatient_15 = c(34, 5, 45, 2, 60), # Ages epatient_16 = c("Years", "Years", "Years", "Months", "Years"), eresponse_05 = rep(2205001, 5), esituation_09 = c(rep("R55", 3), rep("R40.4", 2)), esituation_10 = c(rep("R40.4", 2), rep("R55", 3)), esituation_11 = c(rep("R55", 3), rep("R40.4", 2)), esituation_12 = c(rep("R40.4", 2), rep("R55", 3)), evitals_04 = rep("15 Lead", 5) ) # Run function result <- syncope_01( df = test_data, erecord_01_col = erecord_01, epatient_15_col = epatient_15, epatient_16_col = epatient_16, eresponse_05_col = eresponse_05, esituation_09_col = esituation_09, esituation_10_col = esituation_10, esituation_11_col = esituation_11, esituation_12_col = esituation_12, evitals_04_col = evitals_04 ) # Check structure testthat::expect_s3_class(result, "data.frame") testthat::expect_true(all(c("measure", "pop", "numerator", "denominator", "prop", "prop_label") %in% names(result))) # Check calculations testthat::expect_equal(sum(result$numerator), 5) testthat::expect_equal(sum(result$denominator), 5) testthat::expect_equal(result$prop[result$pop == "Adults"], 1) testthat::expect_equal(nrow(result), 2) # create tables to test correct functioning patient_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), incident_date = as.Date(c("2025-01-01", "2025-01-05", "2025-02-01", "2025-01-01", "2025-06-01")), patient_dob = as.Date(c("2000-01-01", "2020-01-01", "2023-02-01", "2023-01-01", "1970-06-01")), epatient_15 = c(25, 5, 2, 2, 55), # Ages epatient_16 = c("Years", "Years", "Years", "Years", "Years") ) response_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), eresponse_05 = rep(2205001, 5) ) situation_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), esituation_09 = c(rep("R55", 3), rep("R40.4", 2)), esituation_10 = c(rep("R40.4", 2), rep("R55", 3)), esituation_11 = c(rep("R55", 3), rep("R40.4", 2)), esituation_12 = c(rep("R40.4", 2), rep("R55", 3)), ) vitals_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), evitals_04 = rep("15 Lead", 5) ) # test the success of the function result_2 <- syncope_01(patient_scene_table = patient_table, response_table = response_table, situation_table = situation_table, vitals_table = vitals_table, erecord_01_col = erecord_01, epatient_15_col = epatient_15, epatient_16_col = epatient_16, eresponse_05_col = eresponse_05, esituation_09_col = esituation_09, esituation_10_col = esituation_10, esituation_11_col = esituation_11, esituation_12_col = esituation_12, evitals_04_col = evitals_04 ) # Check calculations testthat::expect_equal(sum(result_2$numerator), 5) testthat::expect_equal(sum(result_2$denominator), 5) testthat::expect_equal(result_2$prop[result_2$pop == "Adults"], 1) testthat::expect_equal(nrow(result_2), 2) }) testthat::test_that("syncope_01 handles missing data correctly", { # Synthetic test data missing_data <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), epatient_15 = c(34, 5, 45, 2, 60), # Ages epatient_16 = c("Years", "Years", "Years", "Months", "Years"), eresponse_05 = rep(2205001, 5), esituation_09 = c(rep("R55", 3), rep(NA_character_, 2)), esituation_10 = c(rep("R40.4", 2), rep("R55", 3)), esituation_11 = c(rep("R55", 3), rep(NA_character_, 2)), esituation_12 = c(rep(NA_character_, 2), rep("R55", 3)), evitals_04 = rep("15 Lead", 5) ) result <- syncope_01( df = missing_data, erecord_01_col = erecord_01, epatient_15_col = epatient_15, epatient_16_col = epatient_16, eresponse_05_col = eresponse_05, esituation_09_col = esituation_09, esituation_10_col = esituation_10, esituation_11_col = esituation_11, esituation_12_col = esituation_12, evitals_04_col = evitals_04 ) testthat::expect_true(nrow(result) > 0) testthat::expect_true(all(!is.na(result$denominator))) }) testthat::test_that("syncope_01 returns empty result for non-matching criteria", { # Synthetic test data non_matching_data <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), epatient_15 = c(34, 5, 45, 2, 60), # Ages epatient_16 = c("Years", "Years", "Years", "Months", "Years"), eresponse_05 = rep(2205001, 5), esituation_09 = c(rep("R", 3), rep("R", 2)), esituation_10 = c(rep("R", 2), rep("R", 3)), esituation_11 = c(rep("R", 3), rep("R", 2)), esituation_12 = c(rep("R", 2), rep("R", 3)), evitals_04 = rep("15 Lead", 5) ) result <- syncope_01( df = non_matching_data, erecord_01_col = erecord_01, epatient_15_col = epatient_15, epatient_16_col = epatient_16, eresponse_05_col = eresponse_05, esituation_09_col = esituation_09, esituation_10_col = esituation_10, esituation_11_col = esituation_11, esituation_12_col = esituation_12, evitals_04_col = evitals_04 ) testthat::expect_equal(sum(result$denominator), 0) })