testthat::test_that("safety_04 produces expected results", { # Synthetic test data test_data <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), epatient_15 = c(34, 5, 45, 2, 60), # Ages epatient_16 = c("Years", "Years", "Years", "Months", "Years"), eresponse_05 = rep(2205001, 5), earrest_01 = rep("No", 5), einjury_03 = rep("non-injury", 5), edisposition_14 = rep(4214001, 5), edisposition_30 = rep(4230001, 5), eprocedures_03 = rep("other response", 5) ) # Run function result <- safety_04( df = test_data, erecord_01_col = erecord_01, epatient_15_col = epatient_15, epatient_16_col = epatient_16, eresponse_05_col = eresponse_05, earrest_01_col = earrest_01, einjury_03_col = einjury_03, edisposition_14_col = edisposition_14, transport_disposition_col = edisposition_30, eprocedures_03_col = eprocedures_03 ) # Check structure testthat::expect_s3_class(result, "data.frame") testthat::expect_true(all(c("measure", "pop", "numerator", "denominator", "prop", "prop_label") %in% names(result))) # Check calculations testthat::expect_equal(sum(result$numerator), 2) testthat::expect_equal(sum(result$denominator), 2) testthat::expect_equal(result$prop[result$pop == "Peds"], 1) testthat::expect_equal(nrow(result), 1) # create tables to test correct functioning patient_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), incident_date = as.Date(c("2025-01-01", "2025-01-05", "2025-02-01", "2025-01-01", "2025-06-01")), patient_dob = as.Date(c("2000-01-01", "2020-01-01", "2023-02-01", "2023-01-01", "1970-06-01")), epatient_15 = c(25, 5, 2, 2, 55), # Ages epatient_16 = c("Years", "Years", "Years", "Years", "Years") ) response_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), eresponse_05 = rep(2205001, 5) ) disposition_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), edisposition_14 = rep(4214001, 5), edisposition_30 = rep(4230001, 5), ) arrest_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), earrest_01 = rep("No", 5) ) injury_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), einjury_03 = rep("non-injury", 5) ) procedures_table <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), eprocedures_03 = rep("other response", 5) ) # test the success of the function result_2 <- safety_04(patient_scene_table = patient_table, response_table = response_table, arrest_table = arrest_table, injury_table = injury_table, procedures_table = procedures_table, disposition_table = disposition_table, erecord_01_col = erecord_01, epatient_15_col = epatient_15, epatient_16_col = epatient_16, eresponse_05_col = eresponse_05, earrest_01_col = earrest_01, einjury_03_col = einjury_03, edisposition_14_col = edisposition_14, transport_disposition_col = edisposition_30, eprocedures_03_col = eprocedures_03 ) # Check calculations testthat::expect_equal(sum(result_2$numerator), 3) testthat::expect_equal(sum(result_2$denominator), 3) testthat::expect_equal(result_2$prop[result_2$pop == "Peds"], 1) testthat::expect_equal(nrow(result_2), 1) }) testthat::test_that("safety_04 handles missing data correctly", { # Synthetic test data missing_data <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), epatient_15 = c(34, 5, 45, 2, 60), # Ages epatient_16 = c("Years", "Years", "Years", "Months", "Years"), eresponse_05 = rep(NA_character_, 5), earrest_01 = rep("No", 5), einjury_03 = rep("non-injury", 5), edisposition_14 = rep(4214001, 5), edisposition_30 = rep(4230001, 5), eprocedures_03 = rep("other response", 5) ) result <- safety_04( df = missing_data, erecord_01_col = erecord_01, epatient_15_col = epatient_15, epatient_16_col = epatient_16, eresponse_05_col = eresponse_05, earrest_01_col = earrest_01, einjury_03_col = einjury_03, edisposition_14_col = edisposition_14, transport_disposition_col = edisposition_30, eprocedures_03_col = eprocedures_03 ) testthat::expect_true(nrow(result) > 0) testthat::expect_true(all(!is.na(result$denominator))) }) testthat::test_that("safety_04 returns empty result for non-matching criteria", { # Synthetic test data non_matching_data <- tibble::tibble( erecord_01 = c("R1", "R2", "R3", "R4", "R5"), epatient_15 = c(34, 5, 45, 2, 60), # Ages epatient_16 = c("Years", "Years", "Years", "Months", "Years"), eresponse_05 = rep(2205001, 5), earrest_01 = rep("No", 5), einjury_03 = rep("non-injury", 5), edisposition_14 = rep("chair", 5), edisposition_30 = rep("private car", 5), eprocedures_03 = rep("other response", 5) ) result <- safety_04( df = non_matching_data, erecord_01_col = erecord_01, epatient_15_col = epatient_15, epatient_16_col = epatient_16, eresponse_05_col = eresponse_05, earrest_01_col = earrest_01, einjury_03_col = einjury_03, edisposition_14_col = edisposition_14, transport_disposition_col = edisposition_30, eprocedures_03_col = eprocedures_03 ) testthat::expect_equal(sum(result$denominator), 0) })