test_that("wideformat-filter", { data <- mc_read_data("../data/TOMST/files_table.csv", clean=FALSE) table <- mc_reshape_wide(data, c("A6W79", "A2E32"), c("TMS_T1", "TMS_T2")) expect_true("A6W79_1_94184102_TMS_T1" %in% colnames(table)) expect_equal(ncol(table), 5) expect_equal(nrow(table), 100) cleaned_data <- mc_prep_clean(data, silent=T) agg_data <- mc_agg(cleaned_data) table <- mc_reshape_wide(agg_data, c("A6W79", "A2E32"), c("TMS_T1", "TMS_T2")) expect_true("A6W79_TMS_T1" %in% colnames(table)) expect_equal(ncol(table), 5) expect_equal(nrow(table), 100) }) test_that("wideformat-all", { data <- mc_read_data("../data/TOMST/files_table.csv", clean=FALSE) table <- mc_reshape_wide(data) expect_equal(ncol(table), 10) expect_equal(nrow(table), 111) }) test_that("wideformat-all local time", { data <- mc_read_data("../data/TOMST/files_table.csv", localities_table = "../data/TOMST/localities_table.csv", clean=FALSE) table_utc <- mc_reshape_wide(data, use_utc=TRUE) table <- mc_reshape_wide(data, use_utc=FALSE) expect_equal(table_utc$A1E05_91184101_Thermo_T[table_utc$datetime == lubridate::ymd_h("2020-10-28 9")], table$A1E05_91184101_Thermo_T[table$datetime == lubridate::ymd_h("2020-10-28 10")]) table$datetime <- table$datetime - (60 * 60) expect_equal(table_utc, table) cleaned_data <- mc_prep_clean(data, silent=T) agg_data <- mc_agg(cleaned_data) table_utc <- mc_reshape_wide(agg_data, use_utc=TRUE) table <- mc_reshape_wide(agg_data, use_utc=FALSE) table$datetime <- table$datetime - (60 * 60) expect_equal(table_utc, table) agg_data <- mc_agg(cleaned_data, fun="coverage", period="day") expect_warning(table <- mc_reshape_wide(agg_data, use_utc=FALSE)) }) test_that("wideformat index no serial_number", { data <- mc_read_files("../data/join", "TOMST", clean=TRUE, silent=TRUE) data$localities$`91184101`$loggers[[3]]$metadata@serial_number <- NA_character_ table <- mc_reshape_wide(data) expect_true("91184101_2_91184101_Thermo_T" %in% colnames(table)) expect_true("91184101_3_Thermo_T" %in% colnames(table)) }) test_that("reshape long", { data <- mc_read_data("../data/TOMST/files_table.csv", clean=FALSE) expect_warning(table <- mc_reshape_long(data, c("A6W79", "A2E32"), c("TMS_T1", "TMS_T2")), "Logger 94184103 isn't cleaned. I can't detect the last time_to.") %>% expect_warning("Logger 94184102 isn't cleaned. I can't detect the last time_to.") expect_equal(colnames(table), c("locality_id", "serial_number", "sensor_name", "height", "datetime", "time_to", "value")) expect_equal(nrow(table), 2*(49+75)) cleaned_data <- mc_prep_clean(data, silent=T) agg_data <- mc_agg(cleaned_data) table <- mc_reshape_long(agg_data, c("A6W79", "A2E32"), c("TMS_T1", "TMS_T2")) expect_equal(colnames(table), c("locality_id", "serial_number", "sensor_name", "height", "datetime", "time_to", "value")) expect_equal(nrow(table), 2*(49+75)) expect_true(all(is.na(table$serial_number))) all_data <- mc_agg(cleaned_data, "mean", "all") table <- mc_reshape_long(all_data) expect_true(all(table$time_to == lubridate::ymd_hm("2020-10-28 11:30"))) }) test_that("reshape long local time", { data <- mc_read_data("../data/TOMST/files_table.csv", localities_table = "../data/TOMST/localities_table.csv", clean=TRUE, silent=TRUE) table_utc <- mc_reshape_long(data, use_utc=TRUE) table <- mc_reshape_long(data, use_utc=FALSE) table$datetime <- table$datetime - (60 * 60) table$time_to <- table$time_to - (60 * 60) expect_equal(table_utc, table) agg_data <- mc_agg(data) table_utc <- mc_reshape_long(agg_data, use_utc=TRUE) table <- mc_reshape_long(agg_data, use_utc=FALSE) table$datetime <- table$datetime - (60 * 60) table$time_to <- table$time_to - (60 * 60) expect_equal(table_utc, table) })