downloading reverse dependencies ... downloading albatross_0.3-8.tar.gz ... ok downloading CICA_1.1.1.tar.gz ... ok downloading cpfa_1.1-7.tar.gz ... ok downloading lpda_1.2.0.tar.gz ... ok downloading parafac4microbiome_1.1.2.tar.gz ... ok downloading staRdom_1.1.28.tar.gz ... ok downloading ChemoSpec2D_0.5.1.tar.gz ... ok downloading ChemoSpecUtils_1.0.5.tar.gz ... ok installing dependencies ‘cdom’, ‘ChemoSpec’, ‘ChemoSpec2D’, ‘ChemoSpecUtils’, ‘CMLS’, ‘eemR’, ‘MicrobiotaProcess’, ‘mize’, ‘mlrMBO’, ‘multiway’, ‘neurobase’, ‘rda’, ‘readJDX’, ‘roxut’, ‘TreeSummarizedExperiment’ also installing the dependencies ‘ggstar’, ‘ggtreeExtra’ begin installing package ‘ggstar’ begin installing package ‘ggtreeExtra’ begin installing package ‘CMLS’ begin installing package ‘neurobase’ begin installing package ‘rda’ begin installing package ‘TreeSummarizedExperiment’ begin installing package ‘mize’ begin installing package ‘eemR’ begin installing package ‘cdom’ begin installing package ‘ChemoSpecUtils’ begin installing package ‘readJDX’ begin installing package ‘mlrMBO’ begin installing package ‘roxut’ * installing *source* package ‘rda’ ... ** this is package ‘rda’ version ‘1.2-1’ ** package ‘rda’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rda) * installing *source* package ‘roxut’ ... ** this is package ‘roxut’ version ‘0.4.0’ ** package ‘roxut’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (roxut) * installing *source* package ‘readJDX’ ... ** this is package ‘readJDX’ version ‘0.6.4’ ** package ‘readJDX’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (readJDX) * installing *source* package ‘CMLS’ ... ** this is package ‘CMLS’ version ‘1.0-1’ ** package ‘CMLS’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CMLS) begin installing package ‘multiway’ * installing *source* package ‘ggstar’ ... ** this is package ‘ggstar’ version ‘1.0.4’ ** package ‘ggstar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggstar) * installing *source* package ‘cdom’ ... ** this is package ‘cdom’ version ‘0.1.0’ ** package ‘cdom’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cdom) * installing *source* package ‘mize’ ... ** this is package ‘mize’ version ‘0.2.4’ ** package ‘mize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mize) * installing *source* package ‘eemR’ ... ** this is package ‘eemR’ version ‘1.0.2’ ** package ‘eemR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (eemR) * installing *source* package ‘ChemoSpecUtils’ ... ** this is package ‘ChemoSpecUtils’ version ‘1.0.5’ ** package ‘ChemoSpecUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ChemoSpecUtils) begin installing package ‘ChemoSpec’ begin installing package ‘ChemoSpec2D’ * installing *source* package ‘neurobase’ ... ** this is package ‘neurobase’ version ‘1.32.4’ ** package ‘neurobase’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (neurobase) * installing *source* package ‘ggtreeExtra’ ... ** this is package ‘ggtreeExtra’ version ‘1.17.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggtreeExtra) begin installing package ‘MicrobiotaProcess’ * installing *source* package ‘mlrMBO’ ... ** this is package ‘mlrMBO’ version ‘1.1.5.1’ ** package ‘mlrMBO’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQQUBIo/R.INSTALL1048de53c55221/mlrMBO/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c avl.c -o avl.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hv.c -o hv.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c infill.c -o infill.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o mlrMBO.so avl.o hv.o infill.o init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQQUBIo/R.INSTALL1048de53c55221/mlrMBO/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mlrMBO/00new/mlrMBO/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mlrMBO) * installing *source* package ‘ChemoSpec2D’ ... ** this is package ‘ChemoSpec2D’ version ‘0.5.1’ ** package ‘ChemoSpec2D’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ChemoSpec2D) * installing *source* package ‘multiway’ ... ** this is package ‘multiway’ version ‘1.0-7’ ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (multiway) * installing *source* package ‘ChemoSpec’ ... ** this is package ‘ChemoSpec’ version ‘6.1.11’ ** package ‘ChemoSpec’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ChemoSpec) * installing *source* package ‘TreeSummarizedExperiment’ ... ** this is package ‘TreeSummarizedExperiment’ version ‘2.15.1’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TreeSummarizedExperiment) * installing *source* package ‘MicrobiotaProcess’ ... ** this is package ‘MicrobiotaProcess’ version ‘1.19.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for ‘taxonomy<-’ with signature ‘x="MPSE",value="taxonomyTable"’: no definition for class “taxonomyTable” Creating a generic function for ‘rownames<-’ from package ‘base’ in package ‘MicrobiotaProcess’ in method for ‘get_alltaxadf’ with signature ‘"phyloseq"’: no definition for class “phyloseq” in method for ‘get_taxadf’ with signature ‘"phyloseq"’: no definition for class “phyloseq” in method for ‘get_alphaindex’ with signature ‘"phyloseq"’: no definition for class “phyloseq” in method for ‘get_NRI_NTI’ with signature ‘"phyloseq"’: no definition for class “phyloseq” in method for ‘get_rarecurve’ with signature ‘"phyloseq"’: no definition for class “phyloseq” in method for ‘get_upset’ with signature ‘"phyloseq"’: no definition for class “phyloseq” in method for ‘get_vennlist’ with signature ‘"phyloseq"’: no definition for class “phyloseq” in method for ‘drop_taxa’ with signature ‘"phyloseq"’: no definition for class “phyloseq” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MicrobiotaProcess) checking multiway_1.0-7.tar.gz ... checking albatross_0.3-8.tar.gz ... checking CICA_1.1.1.tar.gz ... checking cpfa_1.1-7.tar.gz ... checking lpda_1.2.0.tar.gz ... checking parafac4microbiome_1.1.2.tar.gz ... checking staRdom_1.1.28.tar.gz ... checking ChemoSpec2D_0.5.1.tar.gz ... checking ChemoSpecUtils_1.0.5.tar.gz ... Depends: Package: multiway Depends: CMLS, parallel Timings: user system elapsed multiway 48.251 3.273 53.188 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 1 7 Check results summary: multiway ... OK rdepends_albatross ... OK rdepends_ChemoSpec2D ... OK rdepends_ChemoSpecUtils ... OK rdepends_CICA ... OK rdepends_cpfa ... OK rdepends_lpda ... OK rdepends_parafac4microbiome ... OK rdepends_staRdom ... NOTE * checking Rd files ... [0s/0s] NOTE * checking Rd cross-references ... NOTE