* using log directory ‘/srv/hornik/tmp/CRAN/multipleOutcomes.Rcheck’ * using R Under development (unstable) (2024-03-07 r86063) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 17.0.6 (5) Debian flang-new version 17.0.6 (5) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘multipleOutcomes/DESCRIPTION’ ... OK * this is package ‘multipleOutcomes’ version ‘0.2’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [2s/2s] NOTE Maintainer: ‘Han Zhang ’ New submission Possibly misspelled words in DESCRIPTION: CUPED (7:248) Pre (7:288) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘multipleOutcomes’ can be installed ... [2s/2s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/3s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [0s/0s] ERROR Running examples in ‘multipleOutcomes-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: multipleOutcomes > ### Title: Fitting Regression Models for Multiple Outcomes and Returning > ### the Matrix of Covariance > ### Aliases: multipleOutcomes > > ### ** Examples > > ## More examples can be found in the vignettes. > > genData <- function(seed = NULL){ + + set.seed(seed) + n <- 400 + sigma <- matrix(c(1, .6, .6, 1), 2) + x <- rmvnorm(n, sigma = sigma) + gam <- c(.1, -.2) + z <- rbinom(n, 1, plogis(1-1/(1+exp(-.5+x%*%gam+.1*rnorm(n))))) + + bet <- c(-.2,.2) + #y <- rbinom(n, 1, plogis(1-1/(1+exp(-.5+x%*%bet + .2*z-.3*rnorm(n))))) + y <- -.5+x%*%bet + .2*z-.3*rnorm(n) + + data.frame(y = y, z = z, x1 = x[, 1], x2 = x[, 2]) + + } > > dat <- genData(123456) Error in rmvnorm(n, sigma = sigma) : could not find function "rmvnorm" Calls: genData Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [82s/82s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 NOTE