* installing *source* package ‘mr.mashr’ ...
** this is package ‘mr.mashr’ version ‘0.3.43’
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 21.1.6 (3)’
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_WARN_LEVEL=1 -DARMA_64BIT_WORD -DARMA_DONT_USE_OPENMP -DARMA_USE_TBB_ALLOC -DARMA_NO_DEBUG -DARMA_USE_BLAS -DARMA_USE_LAPACK -DRCPP_PARALLEL_USE_TBB=1 -fpic  -g -O3 -Wall -pedantic   -c RcppExports.cpp -o RcppExports.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_WARN_LEVEL=1 -DARMA_64BIT_WORD -DARMA_DONT_USE_OPENMP -DARMA_USE_TBB_ALLOC -DARMA_NO_DEBUG -DARMA_USE_BLAS -DARMA_USE_LAPACK -DRCPP_PARALLEL_USE_TBB=1 -fpic  -g -O3 -Wall -pedantic   -c bayes_reg_mv.cpp -o bayes_reg_mv.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_WARN_LEVEL=1 -DARMA_64BIT_WORD -DARMA_DONT_USE_OPENMP -DARMA_USE_TBB_ALLOC -DARMA_NO_DEBUG -DARMA_USE_BLAS -DARMA_USE_LAPACK -DRCPP_PARALLEL_USE_TBB=1 -fpic  -g -O3 -Wall -pedantic   -c misc.cpp -o misc.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_WARN_LEVEL=1 -DARMA_64BIT_WORD -DARMA_DONT_USE_OPENMP -DARMA_USE_TBB_ALLOC -DARMA_NO_DEBUG -DARMA_USE_BLAS -DARMA_USE_LAPACK -DRCPP_PARALLEL_USE_TBB=1 -fpic  -g -O3 -Wall -pedantic   -c mr_mash_updates.cpp -o mr_mash_updates.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_WARN_LEVEL=1 -DARMA_64BIT_WORD -DARMA_DONT_USE_OPENMP -DARMA_USE_TBB_ALLOC -DARMA_NO_DEBUG -DARMA_USE_BLAS -DARMA_USE_LAPACK -DRCPP_PARALLEL_USE_TBB=1 -fpic  -g -O3 -Wall -pedantic   -c scale.cpp -o scale.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_WARN_LEVEL=1 -DARMA_64BIT_WORD -DARMA_DONT_USE_OPENMP -DARMA_USE_TBB_ALLOC -DARMA_NO_DEBUG -DARMA_USE_BLAS -DARMA_USE_LAPACK -DRCPP_PARALLEL_USE_TBB=1 -fpic  -g -O3 -Wall -pedantic   -c update_order.cpp -o update_order.o
clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o mr.mashr.so RcppExports.o bayes_reg_mv.o misc.o mr_mash_updates.o scale.o update_order.o -llapack -L/home/hornik/tmp/R-d-clang-21/lib -lRblas -L/usr/lib/llvm-21/lib/clang/21/lib/linux -L/usr/lib/llvm-21/lib -lflang_rt.runtime -lm -L/home/hornik/tmp/R-d-clang-21/lib -lR
installing to /srv/hornik/tmp/CRAN_pretest/mr.mashr.Rcheck/00LOCK-mr.mashr/00new/mr.mashr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mr.mashr)