* installing *source* package ‘monolix2rx’ ... ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dataSettings.c -o dataSettings.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from dataSettings.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation.c -o equation.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from equation.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o init.c:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c longDef.c -o longDef.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from longDef.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c longOutput.c -o longOutput.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from longOutput.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mem.c -o mem.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mem.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranContent.c -o mlxtranContent.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mlxtranContent.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranFileinfo.c -o mlxtranFileinfo.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mlxtranFileinfo.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranFit.c -o mlxtranFit.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mlxtranFit.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranInd.c -o mlxtranInd.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mlxtranInd.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranIndDefinition.c -o mlxtranIndDefinition.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mlxtranIndDefinition.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranOp.c -o mlxtranOp.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mlxtranOp.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranParameter.c -o mlxtranParameter.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mlxtranParameter.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranTask.c -o mlxtranTask.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from mlxtranTask.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sbuf.c -o sbuf.o sbuf.c:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shared.c -o shared.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from shared.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c summaryData.c -o summaryData.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parseSbuf.h:28, from summaryData.c:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include/rxode2parse.h:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c util.cpp -o util.o util.cpp:2:9: warning: "STRICT_R_HEADERS" redefined 2 | #define STRICT_R_HEADERS | ^~~~~~~~~~~~~~~~ : note: this is the location of the previous definition g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o monolix2rx.so dataSettings.o equation.o init.o longDef.o longOutput.o mem.o mlxtranContent.o mlxtranFileinfo.o mlxtranFit.o mlxtranInd.o mlxtranIndDefinition.o mlxtranOp.o mlxtranParameter.o mlxtranTask.o sbuf.o shared.o summaryData.o util.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR installing to /home/hornik/tmp/CRAN_recheck/monolix2rx.Rcheck/00LOCK-monolix2rx/00new/monolix2rx/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monolix2rx)