# sim_thomas_community() - default argument values are as expected Code sim_thomas_community(s_pool = 3L, n_sim = 100L, seed = 42L) Output $census x y species 1 0.110913769 0.943050781 species_1 2 0.982808321 0.677287570 species_1 3 0.856746803 0.738675602 species_1 4 0.730903256 0.409163714 species_1 5 0.898514625 0.662671447 species_1 6 0.794821457 0.715673905 species_1 7 0.141834638 0.946063141 species_1 8 0.280994147 0.422478515 species_1 9 0.500112333 0.256151539 species_1 10 0.148763344 0.960716593 species_1 11 0.305077798 0.443650749 species_1 12 0.921386233 0.688046632 species_1 13 0.908459093 0.597920694 species_1 14 0.929854267 0.720228049 species_1 15 0.910257912 0.694875781 species_1 16 0.898578180 0.685874316 species_1 17 0.286894878 0.463807244 species_1 18 0.921398634 0.736579334 species_1 19 0.531549143 0.198677562 species_1 20 0.750174091 0.464089480 species_1 21 0.907404686 0.675992153 species_1 22 0.834152237 0.730748726 species_1 23 0.170293091 0.951939625 species_1 24 0.648462481 0.955442369 species_1 25 0.712448578 0.468592521 species_1 26 0.913002316 0.669462654 species_1 27 0.968989094 0.684256354 species_1 28 0.301503110 0.467017128 species_1 29 0.899187367 0.714427943 species_1 30 0.646903948 0.936441052 species_1 31 0.820928533 0.701265213 species_1 32 0.826104829 0.715457118 species_1 33 0.741257842 0.477006104 species_1 34 0.727064836 0.475299794 species_1 35 0.151017478 0.928815111 species_1 36 0.713953541 0.433108543 species_1 37 0.617458644 0.947008175 species_1 38 0.662640541 0.914608074 species_1 39 0.133893758 0.927128493 species_1 40 0.510650831 0.252981821 species_1 41 0.634219704 0.959494572 species_1 42 0.939236868 0.695356079 species_1 43 0.268244027 0.443978457 species_1 44 0.926822408 0.759102604 species_1 45 0.937327558 0.653024922 species_1 46 0.612336804 0.937166295 species_1 47 0.916310598 0.736255446 species_1 48 0.924801981 0.664571227 species_1 49 0.916804555 0.663046857 species_1 50 0.904948496 0.656993548 species_1 51 0.720113935 0.486481677 species_1 52 0.734241923 0.486322791 species_1 53 0.281268181 0.450993465 species_1 54 0.897052463 0.648098610 species_1 55 0.788814706 0.681396970 species_1 56 0.509476092 0.246765444 species_1 57 0.592879100 0.368309826 species_2 58 0.741049959 0.049715743 species_2 59 0.491715511 0.153457006 species_2 60 0.606232635 0.320251254 species_2 61 0.497304294 0.335716513 species_2 62 0.154492979 0.880127008 species_2 63 0.472829897 0.365476029 species_2 64 0.110498855 0.912218226 species_2 65 0.510590511 0.396029059 species_2 66 0.769915777 0.070049467 species_2 67 0.143919743 0.886271171 species_2 68 0.451945663 0.164739862 species_2 69 0.134210524 0.869188670 species_2 70 0.768139535 0.043659458 species_2 71 0.776117067 0.058884837 species_2 72 0.608020731 0.301625973 species_2 73 0.575663009 0.328749640 species_2 74 0.614698248 0.363810591 species_2 75 0.003811242 0.931268740 species_2 76 0.168826475 0.919619832 species_2 77 0.751255553 0.064503013 species_2 78 0.462687026 0.379263583 species_2 79 0.114312613 0.877564337 species_2 80 0.485923636 0.390496295 species_2 81 0.484478036 0.394465181 species_2 82 0.786591351 0.056044986 species_2 83 0.756199271 0.088667052 species_2 84 0.138043359 0.383685013 species_3 85 0.828085319 0.668727012 species_3 86 0.831103341 0.656485310 species_3 87 0.322695493 0.002309701 species_3 88 0.807263700 0.701841268 species_3 89 0.870979203 0.669694587 species_3 90 0.880304623 0.690784906 species_3 91 0.821971491 0.665013712 species_3 92 0.465128076 0.444997724 species_3 93 0.818314542 0.647280967 species_3 94 0.783749076 0.700757131 species_3 95 0.794417569 0.711638164 species_3 96 0.301837430 0.041589058 species_3 97 0.304865176 0.091952956 species_3 98 0.862811923 0.628776519 species_3 99 0.453195018 0.416092355 species_3 100 0.138914335 0.342856485 species_3 $x_min_max [1] 0 1 $y_min_max [1] 0 1 attr(,"class") [1] "community" # sim_thomas_coords() - default argument values are as expected Code sim_thomas_coords(abund_vec = 1:4, seed = 42L) Output $census x y species 1 0.914806043 0.9370754 species_1 2 0.808355637 0.5298764 species_2 3 0.860678066 0.5172028 species_2 4 0.095764710 0.5926002 species_3 5 0.111911586 0.5576663 species_3 6 0.135123186 0.5699768 species_3 7 0.001201375 0.8709752 species_4 8 0.867380696 0.2148270 species_4 9 0.846330157 0.1886754 species_4 10 0.016443149 0.9206982 species_4 $x_min_max [1] 0 1 $y_min_max [1] 0 1 attr(,"class") [1] "community" # rThomas_rcpp() - default argument values are as expected Code rThomas_rcpp(n_points = 100L, n_mother_points = 2L, xmother = NA, ymother = NA, sigma = 0.2) Output x y 1 0.9466524 0.609527738 2 0.9219323 0.549131305 3 0.8757477 0.474185939 4 0.8509816 0.778993750 5 0.5714043 0.129247733 6 0.9560058 0.213928075 7 0.9691198 0.562272618 8 0.9701162 0.421997298 9 0.9558408 0.756434050 10 0.8636285 0.867493739 11 0.9773625 0.589050264 12 0.7284516 0.812410349 13 0.7536635 0.735256699 14 0.6955612 0.332834810 15 0.7426475 0.059791799 16 0.5917583 0.043270789 17 0.8857904 0.278411143 18 0.9359088 0.201688358 19 0.9320569 0.852062172 20 0.8383393 0.183609483 21 0.9280392 0.622799476 22 0.8514236 0.707713305 23 0.7166751 0.665703825 24 0.7176527 0.806983714 25 0.8527856 0.781734083 26 0.8975846 0.108603731 27 0.6463813 0.338347184 28 0.6671556 0.284587128 29 0.9019702 0.616091149 30 0.9272314 0.735198762 31 0.8688504 0.453463348 32 0.5671628 0.221536168 33 0.9069202 0.540646200 34 0.9450972 0.169317741 35 0.6475587 0.426289298 36 0.9780671 0.761430030 37 0.5146202 0.352894974 38 0.6896146 0.704826047 39 0.6846349 0.144975256 40 0.7099392 0.439154335 41 0.6745616 0.693533968 42 0.6453982 0.747903496 43 0.9445585 0.804030019 44 0.5104063 0.680679139 45 0.9919396 0.215836960 46 0.8975704 0.460043816 47 0.8800024 0.389273081 48 0.8138862 0.375542685 49 0.9864894 0.109636786 50 0.8965584 0.549504054 51 0.9120125 0.694632630 52 0.7342248 0.184206654 53 0.6955748 0.295949625 54 0.7080313 0.138451384 55 0.8516260 0.705681596 56 0.6527710 0.301763519 57 0.6501359 0.167820254 58 0.8370989 0.152286760 59 0.7995560 0.919655837 60 0.9050854 0.778831629 61 0.8416083 0.797195328 62 0.9301769 0.748522286 63 0.9138819 0.438187968 64 0.9260159 0.634760013 65 0.9254979 0.926921519 66 0.9006136 0.134355404 67 0.8315415 0.129161973 68 0.8401563 0.868273388 69 0.9274545 0.574398472 70 0.9001144 0.008734224 71 0.6926516 0.166059354 72 0.9105206 0.420239149 73 0.7673123 0.612743654 74 0.9031987 0.376023626 75 0.8917240 0.983719869 76 0.7766940 0.230853318 77 0.7845687 0.077189546 78 0.8934405 0.769492035 79 0.7094022 0.897995867 80 0.8182665 0.619537486 81 0.7384596 0.679033320 82 0.7373277 0.829961070 83 0.9965024 0.549941554 84 0.7965875 0.768161582 85 0.9907499 0.921282692 86 0.7189106 0.754378003 87 0.9254201 0.174734810 88 0.7418242 0.571427393 89 0.8200731 0.894639131 90 0.6763112 0.780264733 91 0.8510299 0.609808322 92 0.9077231 0.547964407 93 0.6716230 0.744399106 94 0.9352641 0.538820929 95 0.8786627 0.946089867 96 0.8365616 0.187906718 97 0.9755999 0.456193414 98 0.8919547 0.445457540 99 0.8660830 0.340074856 100 0.7337550 0.222980551 --- Code rThomas_rcpp(n_points = 100L, n_mother_points = 2L, xmother = 0.5, ymother = 0.5, sigma = 0.2) Output x y 1 0.46433478 0.47697280 2 0.35640712 0.27085336 3 0.63522529 0.67971992 4 0.28158235 0.18740570 5 0.70582814 0.68295497 6 0.09804431 0.61650747 7 0.46037513 0.29415824 8 0.69491107 0.37626795 9 0.72299436 0.41741103 10 0.43565710 0.16426601 11 0.90826263 0.15603993 12 0.52231538 0.56931722 13 0.81948265 0.43328292 14 0.33019099 0.70128729 15 0.68409051 0.25869219 16 0.68550260 0.51399955 17 0.13911801 0.27563548 18 0.60228930 0.36147738 19 0.53247614 0.48707862 20 0.59250173 0.16214114 21 0.45431330 0.43043438 22 0.10737080 0.51680993 23 0.77647463 0.65261941 24 0.50247465 0.22794346 25 0.18774684 0.56495413 26 0.57251604 0.44504938 27 0.56021068 0.79856222 28 0.25277226 0.66342880 29 0.61754325 0.51792846 30 0.66151266 0.65357480 31 0.09843536 0.60819470 32 0.54869050 0.18075501 33 0.36571699 0.46853191 34 0.36000715 0.41133816 35 0.70905517 0.87546591 36 0.80153188 0.50550364 37 0.51071420 0.41302032 38 0.36089556 0.42997953 39 0.20806921 0.70969147 40 0.05498505 0.88619994 41 0.49743405 0.53038946 42 0.65854255 0.48448342 43 0.53206548 0.41327161 44 0.58854577 0.25797324 45 0.45030341 0.58446408 46 0.77752318 0.50153221 47 0.81281390 0.17540481 48 0.52406528 0.45052283 49 0.12683723 0.54903581 50 0.68998667 0.28223238 51 0.66773387 0.36907694 52 0.51189457 0.49393584 53 0.70022265 0.64949040 54 0.69027857 0.66726580 55 0.62616368 0.41345896 56 0.15345027 0.39489233 57 0.59310252 0.61487125 58 0.53584219 0.54791908 59 0.36760175 0.34452616 60 0.58992199 0.62361993 61 0.66058654 0.38530463 62 0.58047322 0.56697776 63 0.27873494 0.42788773 64 0.66895844 0.49160570 65 0.74998399 0.72926268 66 0.19995581 0.37860215 67 0.41240908 0.54098200 68 0.38016362 0.75138133 69 0.64505804 0.69744163 70 0.55312495 0.71534525 71 0.58186256 0.36165025 72 0.64362724 0.59789140 73 0.71688793 0.40438873 74 0.31670879 0.24963531 75 0.16174293 0.45840693 76 0.50055444 0.23435806 77 0.46763848 0.18414169 78 0.40499326 0.38498858 79 0.35964877 0.20357679 80 0.32446712 0.25742057 81 0.37758732 0.54167620 82 0.39843042 0.33981290 83 0.55893847 0.57854825 84 0.34001303 0.59002398 85 0.37291370 0.25803186 86 0.47900584 0.17827495 87 0.44823177 0.84591164 88 0.93177327 0.31794551 89 0.40254843 0.77458156 90 0.59107101 0.84498682 91 0.56572807 0.79330213 92 0.55500854 0.73600334 93 0.78443865 0.63277532 94 0.81985220 0.09811363 95 0.52831457 0.49921056 96 0.56486313 0.35599497 97 0.64827201 0.48007865 98 0.48010188 0.41216634 99 0.31669307 0.84193771 100 0.53174443 0.83714527 --- Code rThomas_rcpp(n_points = 100L, n_mother_points = 2L, xmother = c(0.2, 0.8), ymother = c(0.2, 0.8), sigma = 0.2) Output x y 1 0.930225194 0.693433475 2 0.280881462 0.321842209 3 0.303956577 0.085806675 4 0.258104896 0.284461271 5 0.544823799 0.666001742 6 0.920920725 0.796171846 7 0.092662661 0.325616847 8 0.713741879 0.700094210 9 0.598011118 0.009503932 10 0.396679028 0.285698543 11 0.736523627 0.835800793 12 0.929037989 0.752638608 13 0.754331477 0.935071112 14 0.331030278 0.770183787 15 0.082380428 0.067940834 16 0.889935464 0.590223340 17 0.251906291 0.232312014 18 0.711755469 0.624261184 19 0.937761550 0.945016604 20 0.738212478 0.709419423 21 0.954296808 0.886177547 22 0.939415440 0.697986768 23 0.009082876 0.186285387 24 0.962272500 0.627077284 25 0.289235030 0.752813210 26 0.015041067 0.472709206 27 0.348479032 0.025141465 28 0.315311754 0.144900108 29 0.797379870 0.933593615 30 0.574363901 0.869759914 31 0.944780546 0.666233452 32 0.554463608 0.647198818 33 0.735409938 0.976035980 34 0.843909602 0.874058884 35 0.793152383 0.977557159 36 0.181826999 0.473006273 37 0.228959675 0.071878646 38 0.498250245 0.826700767 39 0.005321169 0.036034945 40 0.636601670 0.700210819 41 0.603787899 0.799600882 42 0.161655553 0.491878433 43 0.146626646 0.246637875 44 0.234094694 0.440133632 45 0.388384843 0.150277193 46 0.866614930 0.546984328 47 0.208244076 0.816177648 48 0.825012739 0.493490537 49 0.843242309 0.837532763 50 0.503121516 0.479806850 51 0.608499552 0.775118884 52 0.895576628 0.889512601 53 0.250002809 0.349530499 54 0.988825414 0.610747840 55 0.345252807 0.451160894 56 0.869539346 0.982752517 57 0.955085077 0.913363519 58 0.418318116 0.900589252 59 0.692121835 0.608450870 60 0.924896926 0.681410654 61 0.911139824 0.363370130 62 0.112903118 0.013067452 63 0.461087668 0.559064774 64 0.488421878 0.228207343 65 0.905745607 0.967015785 66 0.987960205 0.832674939 67 0.438532853 0.518434127 68 0.536707268 0.541195965 69 0.161094261 0.261121137 70 0.587178057 0.477284506 71 0.607696967 0.489814280 72 0.306564115 0.343933151 73 0.661943322 0.939751850 74 0.352140649 0.121754630 75 0.503456426 0.910864128 76 0.449048530 0.236275489 77 0.800927277 0.870142702 78 0.952764987 0.679322525 79 0.071904246 0.325515271 80 0.916594432 0.602686513 81 0.674952248 0.651522141 82 0.080503417 0.233050285 83 0.368983263 0.286188790 84 0.740308802 0.743277725 85 0.897049544 0.759595187 86 0.515533108 0.554497473 87 0.488374328 0.191643579 88 0.952734841 0.602811614 89 0.277687815 0.031021348 90 0.882137422 0.887029341 91 0.857758672 0.818162264 92 0.198625403 0.547154422 93 0.579637026 0.619981971 94 0.083579611 0.049223299 95 0.332008302 0.149879913 96 0.343784019 0.048772237 97 0.245312715 0.284328716 98 0.911662474 0.899192256 99 0.942229883 0.613260803 100 0.133158269 0.187003851