* installing *source* package ‘mmrm’ ...
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 18.1.8 (11)’
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c empirical.cpp -o empirical.o
In file included from empirical.cpp:1:
In file included from ./derivatives.h:4:
In file included from ./chol_cache.h:4:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from empirical.cpp:1:
In file included from ./derivatives.h:4:
In file included from ./chol_cache.h:4:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c exports.cpp -o exports.o
In file included from exports.cpp:1:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from exports.cpp:1:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from exports.cpp:1:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
In file included from exports.cpp:1:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  246 |   int count = 0;
      |       ^
5 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c jacobian.cpp -o jacobian.o
In file included from jacobian.cpp:1:
In file included from ./derivatives.h:4:
In file included from ./chol_cache.h:4:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from jacobian.cpp:1:
In file included from ./derivatives.h:4:
In file included from ./chol_cache.h:4:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c kr_comp.cpp -o kr_comp.o
In file included from kr_comp.cpp:1:
In file included from ./derivatives.h:4:
In file included from ./chol_cache.h:4:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from kr_comp.cpp:1:
In file included from ./derivatives.h:4:
In file included from ./chol_cache.h:4:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c mmrm.cpp -o mmrm.o
In file included from mmrm.cpp:1:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from mmrm.cpp:1:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c predict.cpp -o predict.o
In file included from predict.cpp:1:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from predict.cpp:1:
In file included from ./covariance.h:4:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c test-chol_cache.cpp -o test-chol_cache.o
In file included from test-chol_cache.cpp:1:
In file included from ./testthat-helpers.h:5:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from test-chol_cache.cpp:1:
In file included from ./testthat-helpers.h:5:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c test-covariance.cpp -o test-covariance.o
In file included from test-covariance.cpp:1:
In file included from ./testthat-helpers.h:5:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from test-covariance.cpp:1:
In file included from ./testthat-helpers.h:5:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c test-derivatives.cpp -o test-derivatives.o
In file included from test-derivatives.cpp:1:
In file included from ./testthat-helpers.h:5:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from test-derivatives.cpp:1:
In file included from ./testthat-helpers.h:5:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c test-runner.cpp -o test-runner.o
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c test-utils.cpp -o test-utils.o
In file included from test-utils.cpp:1:
In file included from ./testthat-helpers.h:5:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from test-utils.cpp:1:
In file included from ./testthat-helpers.h:5:
In file included from ./utils.h:5:
In file included from ./tmb_includes.h:57:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/testthat/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -D TMBAD_FRAMEWORK -D EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c tmb.cpp -o tmb.o
In file included from tmb.cpp:6:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from tmb.cpp:6:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-18/lib -Wl,-O1 -o mmrm.so empirical.o exports.o jacobian.o kr_comp.o mmrm.o predict.o test-chol_cache.o test-covariance.o test-derivatives.o test-runner.o test-utils.o tmb.o -L/home/hornik/tmp/R-d-clang-18/lib -lR
installing to /srv/hornik/tmp/CRAN_pretest/mmrm.Rcheck/00LOCK-mmrm/00new/mmrm/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mmrm)