Package check result: OK

Changes to worse in reverse depends:

Package: tern.mmrm
Check: tests
New result: ERROR
    Running ‘testthat.R’ [24s/24s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > pkg_name <- "tern.mmrm"
    > if (requireNamespace("testthat", quietly = TRUE)) {
    +   library(testthat)
    +   library(vdiffr)
    +   is_on_ci <- isTRUE(as.logical(Sys.getenv("CI")))
    +   if (is_on_ci) {
    +     reporter <- MultiReporter$new(list(
    +       CheckReporter$new()
    +     ))
    +     test_results <- test_check(pkg_name, reporter = reporter)
    +     saveRDS(test_results, "unit_testing_results.rds")
    +   } else {
    +     reporter <- ParallelProgressReporter$new()
    +     test_check(pkg_name, reporter = reporter)
    +   }
    + }
    Loading required package: tern.mmrm
    Loading required package: tern
    Loading required package: rtables
    Loading required package: formatters
    
    Attaching package: 'formatters'
    
    The following object is masked from 'package:base':
    
        %||%
    
    Loading required package: magrittr
    
    Attaching package: 'magrittr'
    
    The following objects are masked from 'package:testthat':
    
        equals, is_less_than, not
    
    
    Attaching package: 'rtables'
    
    The following object is masked from 'package:utils':
    
        str
    
    ✔ | F W  S  OK | Context
    
    ⠋ [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ] Starting up...                          
    ✔ |         31 | assert_data                                                    
    
    Attaching package: 'dplyr'
    
    The following object is masked from 'package:testthat':
    
        matches
    
    The following objects are masked from 'package:stats':
    
        filter, lag
    
    The following objects are masked from 'package:base':
    
        intersect, setdiff, setequal, union
    
    mmrm() registered as emmeans extension
    
    ✔ |         40 | fit_mmrm [3.9s]                                                
    
    ✔ |          4 | formula                                                        
    
    ✔ |     16   0 | g_mmrm [5.7s]                                                  
    
    ✔ |         10 | labels                                                         
    
    ✖ | 1    5  43 | lsmeans [1.5s]                                                 
    ────────────────────────────────────────────────────────────────────────────────
    Error ('test-lsmeans.R:190:3'): h_get_average_visit_specs uses number of patients with any of the averaged visits as n
    Error in `refit_multiple_optimizers(fit = fit, control = control)`: No optimizer led to a successful model fit. Please try to use a different covariance structure or other covariates.
    Backtrace:
        ▆
     1. └─mmrm::mmrm(formula = FEV1 ~ AVISIT + ar1(AVISIT | USUBJID), data = small_dat) at test-lsmeans.R:190:3
     2.   └─mmrm::refit_multiple_optimizers(fit = fit, control = control)
    ────────────────────────────────────────────────────────────────────────────────
    
    ✔ |      6   5 | subgroups [3.6s]                                               
    
    ✔ |      4   0 | table_mmrmt01 [1.2s]                                           
    
    ✔ |      6  30 | tabulate_mmrm [3.4s]                                           
    
    ✔ |          5 | utils                                                          
    
    ✔ |      3  10 | covariance_plot                                                
    
                                                                                    
    ══ Results ═════════════════════════════════════════════════════════════════════
    Duration: 20.5 s
    
    ── Skipped tests (40) ──────────────────────────────────────────────────────────
    • On CRAN (40): 'test-g_mmrm.R:30:3', 'test-g_mmrm.R:37:3',
      'test-g_mmrm.R:44:3', 'test-g_mmrm.R:68:3', 'test-g_mmrm.R:77:3',
      'test-g_mmrm.R:84:3', 'test-g_mmrm.R:91:3', 'test-g_mmrm.R:98:3',
      'test-g_mmrm.R:105:3', 'test-g_mmrm.R:121:3', 'test-g_mmrm.R:128:3',
      'test-g_mmrm.R:139:3', 'test-g_mmrm.R:164:3', 'test-g_mmrm.R:175:3',
      'test-g_mmrm.R:188:3', 'test-g_mmrm.R:201:3', 'test-lsmeans.R:300:3',
      'test-lsmeans.R:311:3', 'test-lsmeans.R:320:3', 'test-lsmeans.R:335:3',
      'test-lsmeans.R:648:3', 'test-subgroups.R:110:3', 'test-subgroups.R:118:3',
      'test-subgroups.R:131:3', 'test-subgroups.R:140:3', 'test-subgroups.R:163:3',
      'test-subgroups.R:196:3', 'test-table_mmrmt01.R:41:3',
      'test-table_mmrmt01.R:46:3', 'test-table_mmrmt01.R:51:3',
      'test-table_mmrmt01.R:56:3', 'test-tabulate_mmrm.R:262:3',
      'test-tabulate_mmrm.R:268:3', 'test-tabulate_mmrm.R:274:3',
      'test-tabulate_mmrm.R:376:3', 'test-tabulate_mmrm.R:393:3',
      'test-tabulate_mmrm.R:435:3', 'test_covariance_plot.R:109:3',
      'test_covariance_plot.R:124:3', 'test_covariance_plot.R:139:3'
    
    ── Failed tests ────────────────────────────────────────────────────────────────
    Error ('test-lsmeans.R:190:3'): h_get_average_visit_specs uses number of patients with any of the averaged visits as n
    Error in `refit_multiple_optimizers(fit = fit, control = control)`: No optimizer led to a successful model fit. Please try to use a different covariance structure or other covariates.
    Backtrace:
        ▆
     1. └─mmrm::mmrm(formula = FEV1 ~ AVISIT + ar1(AVISIT | USUBJID), data = small_dat) at test-lsmeans.R:190:3
     2.   └─mmrm::refit_multiple_optimizers(fit = fit, control = control)
    
    [ FAIL 1 | WARN 0 | SKIP 40 | PASS 178 ]
    Deleting unused snapshots:
    • subgroups/mmrm-forest-plot-with-customizations.svg
    • subgroups/mmrm-forest-plot.svg
    Error: Test failures
    Execution halted