R version 4.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > > library("mlt") Loading required package: basefun Loading required package: variables > > ### 10.1080/15598608.2013.772835 > ### rho = exp(logrho) > ### 1 = rho = exp(0) is identical to .Logistic > lg <- mlt:::.GammaFrailty(logrho = 0) > x <- -30:30 / 20 > p <- 1:99 / 100 > tol <- sqrt(.Machine$double.eps) > stopifnot(max(abs(lg$p(x) - mlt:::.Logistic()$p(x))) < tol) > > stopifnot(max(abs(lg$d(x) - mlt:::.Logistic()$d(x))) < tol) > > stopifnot(max(abs(lg$dd(x) - mlt:::.Logistic()$dd(x))) < tol) > > stopifnot(max(abs(lg$ddd(x) - mlt:::.Logistic()$ddd(x))) < tol) > > stopifnot(max(abs(lg$dd2d(x) - mlt:::.Logistic()$dd2d(x))) < tol) > > stopifnot(max(abs(lg$q(p) - mlt:::.Logistic()$q(p))) < tol) > > ### 0 = rho = exp(-infty) is identical to .MinExtrVal > tol <- (.Machine$double.eps)^(1 / 2.5) > lg <- mlt:::.GammaFrailty(logrho = -18) > stopifnot(max(abs(lg$p(x) - mlt:::.MinExtrVal()$p(x))) < tol) > > stopifnot(max(abs(lg$d(x) - mlt:::.MinExtrVal()$d(x))) < tol) > > stopifnot(max(abs(lg$dd(x) - mlt:::.MinExtrVal()$dd(x))) < tol) > > stopifnot(max(abs(lg$ddd(x) - mlt:::.MinExtrVal()$ddd(x))) < tol) > > stopifnot(max(abs(lg$dd2d(x) - mlt:::.MinExtrVal()$dd2d(x))) < tol) > > stopifnot(max(abs(lg$q(p) - mlt:::.MinExtrVal()$q(p))) < tol) > > ### logitalpha = logit(1) is identical to .MinExtrVal > tol <- (.Machine$double.eps)^(1 / 2.5) > lg <- mlt:::.PositiveStableFrailty(logitalpha = 50) > stopifnot(max(abs(lg$p(x) - mlt:::.MinExtrVal()$p(x))) < tol) > > stopifnot(max(abs(lg$d(x) - mlt:::.MinExtrVal()$d(x))) < tol) > > stopifnot(max(abs(lg$dd(x) - mlt:::.MinExtrVal()$dd(x))) < tol) > > stopifnot(max(abs(lg$ddd(x) - mlt:::.MinExtrVal()$ddd(x))) < tol) > > stopifnot(max(abs(lg$dd2d(x) - mlt:::.MinExtrVal()$dd2d(x))) < tol) > > stopifnot(max(abs(lg$q(p) - mlt:::.MinExtrVal()$q(p))) < tol) > > > proc.time() user system elapsed 0.92 0.09 1.00