* using log directory ‘/srv/hornik/tmp/CRAN/mlr3mbo.Rcheck’ * using R Under development (unstable) (2024-02-29 r86017) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 17.0.6 (5) Debian flang-new version 17.0.6 (5) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘mlr3mbo/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘mlr3mbo’ version ‘0.2.2’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [6s/10s] NOTE Maintainer: ‘Lennart Schneider ’ Found the following (possibly) invalid URLs: URL: https://mlr3mbo.mlr-org.com/reference/default_gp.html From: inst/doc/mlr3mbo.html Status: 404 Message: Not Found URL: https://mlr3mbo.mlr-org.com/reference/default_rf.html From: inst/doc/mlr3mbo.html Status: 404 Message: Not Found Size of tarball: 22984190 bytes * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... NOTE Found the following apparent object files/libraries: revdep/library/mlr3mbo/new/Rcpp/libs/Rcpp.so revdep/library/mlr3mbo/new/RhpcBLASctl/libs/RhpcBLASctl.so revdep/library/mlr3mbo/new/backports/libs/backports.so revdep/library/mlr3mbo/new/bbotk/libs/bbotk.so revdep/library/mlr3mbo/new/checkmate/libs/checkmate.so revdep/library/mlr3mbo/new/data.table/libs/data_table.so revdep/library/mlr3mbo/new/digest/libs/digest.so revdep/library/mlr3mbo/new/mlbench/libs/mlbench.so revdep/library/mlr3mbo/new/mlr3mbo/libs/mlr3mbo.so revdep/library/mlr3mbo/new/mlr3misc/libs/mlr3misc.so revdep/library/mlr3mbo/new/parallelly/libs/parallelly.so revdep/library/mlr3mbo/new/spacefillr/libs/spacefillr.so revdep/library/mlr3mbo/new/uuid/libs/uuid.so Object files/libraries should not be included in a source package. Subdirectory ‘revdep/library/mlr3mbo/new/PRROC’ seems to contain an installed version of the package. * checking if there is a namespace ... OK * checking for executable files ... WARNING Found the following executable file: revdep/library/mlr3mbo/new/listenv/R/listenv.rdb Source packages should not contain undeclared executable files. See section ‘Package structure’ in the ‘Writing R Extensions’ manual. * checking for hidden files and directories ... OK * checking for portable file names ... NOTE Found the following non-portable file paths: mlr3mbo/revdep/library/mlr3mbo/new/Rcpp/include/Rcpp/generated/InternalFunctionWithStdFunction_call.h mlr3mbo/revdep/library/mlr3mbo/new/Rcpp/include/Rcpp/sugar/operators/logical_operators__Vector__Vector.h mlr3mbo/revdep/library/mlr3mbo/new/Rcpp/include/Rcpp/sugar/operators/logical_operators__Vector__primitive.h mlr3mbo/revdep/library/mlr3mbo/new/Rcpp/tinytest/testRcppInterfaceExporter/inst/include/testRcppInterfaceExporter.h mlr3mbo/revdep/library/mlr3mbo/new/Rcpp/tinytest/testRcppInterfaceExporter/inst/include/testRcppInterfaceExporter_RcppExports.h Tarballs are only required to store paths of up to 100 bytes and cannot store those of more than 256 bytes, with restrictions including to 100 bytes for the final component. See section ‘Package structure’ in the ‘Writing R Extensions’ manual. * checking for sufficient/correct file permissions ... OK * checking whether package ‘mlr3mbo’ can be installed ... [3s/3s] OK * used C compiler: ‘Debian clang version 17.0.6 (5)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... NOTE Non-standard file/directory found at top level: ‘revdep’ * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... NOTE Found the following CITATION files in a non-standard place: revdep/library/mlr3mbo/new/PRROC/CITATION revdep/library/mlr3mbo/new/Rcpp/CITATION revdep/library/mlr3mbo/new/checkmate/CITATION revdep/library/mlr3mbo/new/future.apply/CITATION revdep/library/mlr3mbo/new/future/CITATION revdep/library/mlr3mbo/new/mlbench/CITATION revdep/library/mlr3mbo/new/mlr3/CITATION revdep/library/mlr3mbo/new/palmerpenguins/CITATION Most likely ‘inst/CITATION’ should be used instead. * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking whether startup messages can be suppressed ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s/11s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking include directives in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [8s/8s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [111s/110s] OK Running ‘testthat.R’ [111s/110s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [4s/4s] OK * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [2s/2s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING, 5 NOTEs