* using log directory ‘/srv/hornik/tmp/CRAN_pretest/mbg.Rcheck’ * using R Under development (unstable) (2025-03-26 r88060) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (1+b1) Debian flang-new version 19.1.7 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘mbg/DESCRIPTION’ ... OK * this is package ‘mbg’ version ‘1.0.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/7s] NOTE Maintainer: ‘Nathaniel Henry <nat@henryspatialanalysis.com>’ New submission Possibly misspelled words in DESCRIPTION: Geostatistics (2:20) geostatistical (10:65) geostatistics (9:24) Suggests or Enhances not in mainstream repositories: INLA Availability using Additional_repositories specification: INLA yes https://inla.r-inla-download.org/R/stable/ Found the following (possibly) invalid URLs: URL: http://r-inla.org/ (moved to https://www.r-inla.org/) From: README.md Status: 301 Message: Moved Permanently URL: http://www.numdam.org/article/JSFS_2017__158_3_62_0.pdf (moved to https://www.numdam.org/article/JSFS_2017__158_3_62_0.pdf) From: inst/doc/all-model-options.html Status: 301 Message: Moved Permanently URL: https://cran.r-project.org/web/packages/data.table/ From: README.md Status: 200 Message: OK CRAN URL not in canonical form URL: https://cran.r-project.org/web/packages/spatialEco/index.html From: man/dissolve_sf_by_attribute.Rd Status: 200 Message: OK CRAN URL not in canonical form URL: https://pmc.ncbi.nlm.nih.gov/articles/PMC6089257/ From: inst/doc/spatial-ml-models.html Status: 403 Message: Forbidden URL: https://royalsocietypublishing.org/doi/full/10.1098/rsif.2017.0520 From: inst/doc/spatial-ml-models.html Status: 403 Message: Forbidden The canonical URL of the CRAN page for a package is https://CRAN.R-project.org/package=pkgname For content that is 'Moved Permanently', please change http to https, add trailing slashes, or replace the old by the new URL. Found the following (possibly) invalid file URI: URI: model_comparison.html From: inst/doc/model-comparison.html Found the following URLs which should use \doi (with the DOI name only): File ‘prepare_inla_data_stack.Rd’: https://doi.org/10.1214/16-STS576 * checking package namespace information ... OK * checking package dependencies ... INFO Package suggested but not available for checking: ‘INLA’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘mbg’ can be installed ... [16s/16s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [5s/5s] OK * checking whether the package can be loaded with stated dependencies ... [5s/5s] OK * checking whether the package can be unloaded cleanly ... [4s/4s] OK * checking whether the namespace can be loaded with stated dependencies ... [4s/4s] OK * checking whether the namespace can be unloaded cleanly ... [5s/5s] OK * checking loading without being on the library search path ... [5s/5s] OK * checking whether startup messages can be suppressed ... [5s/5s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [21s/21s] OK * checking Rd files ... [0s/0s] NOTE checkRd: (-1) dissolve_sf_by_attribute.Rd:22: Lost braces 22 | \url{https://cran.r-project.org/web/packages/spatialEco/index.html}{spatialEco} | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... INFO Package unavailable to check Rd xrefs: ‘INLA’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... NONE * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [3s/3s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs