R Under development (unstable) (2024-10-16 r87241 ucrt) -- "Unsuffered Consequences"
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> library(mbbefd)
Loading required package: fitdistrplus
Loading required package: MASS
Loading required package: survival
Loading required package: alabama
Loading required package: numDeriv
Loading required package: Rcpp
Package:  mbbefd
Version:  0.8.12
Date:     
BugReport: https://github.com/spedygiorgio/mbbefd/issues


> library(fitdistrplus)
> data(smokedfish)
> 
> #normed data
> listeria <- apply(smokedfish, 1, mean, na.rm=TRUE) / 100
> #purety rate
> set.seed(1234)
> x <- pmin(pmax(jitter(1-listeria, amount=.2), 0.01), 1)
> 
> #mledist(x[x!=1], "stpareto", start=list(a=2), optim.method="Nelder", control=list(trace=1, REPORT=1), lower=.01)
> 
> #, control=list(trace=1, REPORT=1)
> flist <- list(
+   fitDR(x, "oistpareto", start=list(a=0.01), optim.method="Nelder"),
+   fitDR(x, "oibeta"), fitDR(x, "oigbeta"))
> names(flist) <- dlist <- c("oistpareto", "oibeta", "oigbeta")
> 
> gof1 <- gofstat(flist)
> 
> mm <- rbind(KS = gof1$ks, CvM = gof1$cvm, AD = gof1$ad, AIC = gof1$aic, BIC = gof1$bic)
> rownames(mm) <- c("Kolmogorov-Smirnov statistic", "Cramer-von Mises statistic", 
+                   "Anderson-Darling statistic", "Aikake's Information Criterion", "Bayesian Information Criterion")
> 
> 
> cdfcomp(flist, do.points=FALSE, leg=dlist, addlegend = FALSE, fitlwd=1.5, main="Emp./theo. CDFs - ecotoxicology")
> legend("topleft", col=c("red", "green", "blue"), leg=dlist, lty=1:3, lwd=2, bty="n")
> 
> #log scale
> par(mar=c(4,4,2,1))
> cdfcomp(flist, do.points=FALSE, leg=dlist, xlogscale = TRUE, addlegend = FALSE, fitlwd=1.5, main="Emp./theo. CDFs - ecotoxicology")
> legend("topleft", col=c("red", "green", "blue"), leg=dlist, lty=1:3, lwd=2, bty="n")
> 
> proc.time()
   user  system elapsed 
   1.65    0.34    1.92