library(matrixTests) source("utils/capture.r") #--- removing na groups -------------------------------------------------------- wrn <- '2 columns dropped due to missing group information' # 2 NAs x <- 1:10 g <- c(1,1,1,1,NA,NA,2,2,2,2) res <- capture(row_oneway_equalvar(x, g)) stopifnot(all.equal(res$warning, wrn)) stopifnot(all.equal(res$value$obs.tot, 8)) stopifnot(all.equal(res$value$obs.groups, 2)) #--- one observation per group ------------------------------------------------- wrn <- 'row_oneway_equalvar: 1 of the rows had one observation per group.\nFirst occurrence at row 1' nacolumns <- c("df.between", "df.within", "statistic", "pvalue") # two groups with a single obervation each x <- 1:2 g <- 1:2 res <- capture(row_oneway_equalvar(x, g)) stopifnot(all.equal(res$warning, wrn)) stopifnot(all(is.na(res$value[,nacolumns]))) stopifnot(all.equal(res$value$obs.tot, 2)) stopifnot(all.equal(res$value$obs.groups, 2)) # 10 groups 10 observations x <- 1:10 g <- 1:10 res <- capture(row_oneway_equalvar(x, g)) stopifnot(all.equal(res$warning, wrn)) stopifnot(all(is.na(res$value[,nacolumns]))) stopifnot(all.equal(res$value$obs.tot, 10)) stopifnot(all.equal(res$value$obs.groups, 10)) # 2 groups 3 observations but one is NA x <- c(1:2, NA) g <- c("a", "b", "b") res <- capture(row_oneway_equalvar(x, g)) stopifnot(all.equal(res$warning, wrn)) stopifnot(all(is.na(res$value[,nacolumns]))) stopifnot(all.equal(res$value$obs.tot, 2)) stopifnot(all.equal(res$value$obs.groups, 2)) #--- less than 2 groups -------------------------------------------------------- wrn <- 'row_oneway_equalvar: 1 of the rows had less than 2 groups with enough observations.\nFirst occurrence at row 1' nacolumns <- c("df.between", "df.within", "statistic", "pvalue") # single group with 10 observations res <- capture(row_oneway_equalvar(1:10, rep(1,10))) stopifnot(all.equal(res$warning, wrn)) stopifnot(all(is.na(res$value[,nacolumns]))) stopifnot(all.equal(res$value$obs.groups, 1)) stopifnot(all.equal(res$value$obs.tot, 10)) # 3 groups but others have only NA values x <- c(1:8, NA, NA) g <- c(rep("a", 8), "b", "c") res <- capture(row_oneway_equalvar(x, g)) stopifnot(all.equal(res$warning, wrn)) stopifnot(all(is.na(res$value[,nacolumns]))) stopifnot(all.equal(res$value$obs.groups, 1)) stopifnot(all.equal(res$value$obs.tot, 8)) #--- single unique value ------------------------------------------------------- wrn <- 'row_oneway_equalvar: 1 of the rows had essentially constant values.\nFirst occurrence at row 1' nacolumns <- c("df.between", "df.within", "statistic", "pvalue") # two groups res <- capture(row_oneway_equalvar(rep(1, 3), c("a","a","b"))) stopifnot(all.equal(res$warning, wrn)) stopifnot(all(is.na(res$value[,nacolumns]))) stopifnot(all.equal(res$value$obs.groups, 2)) stopifnot(all.equal(res$value$obs.tot, 3)) # two groups with NA values x <- c(rep(1,8),NA,NA) g <- c(rep("a", 4), rep("b", 4), "c", "d") res <- capture(row_oneway_equalvar(x, g)) stopifnot(all.equal(res$warning, wrn)) stopifnot(all(is.na(res$value[,nacolumns]))) stopifnot(all.equal(res$value$obs.groups, 2)) stopifnot(all.equal(res$value$obs.tot, 8)) #--- single unique values within each group ------------------------------------ wrn <- 'row_oneway_equalvar: 1 of the rows had zero within group variance: result might be unreliable.\nFirst occurrence at row 1' # two groups - constant values within group x <- c(1,1,0,0) g <- c(1,1,2,2) res <- capture(row_oneway_equalvar(x, g)) stopifnot(all.equal(res$warning, wrn)) stopifnot(all.equal(res$value$obs.tot, 4)) stopifnot(all.equal(res$value$obs.groups, 2)) # three groups - constant values within each group + NAs x <- c(3,3,NA,0,0,NA,-1,-1,NA) g <- c(1,1,1,2,2,2,3,3,3) res <- capture(row_oneway_equalvar(x, g)) stopifnot(all.equal(res$warning, wrn)) stopifnot(all.equal(res$value$obs.tot, 6)) stopifnot(all.equal(res$value$obs.groups, 3))