library("matrixStats") library("stats") # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # Local functions # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - binCounts_hist <- function(x, bx, right = FALSE, ...) { n0 <- graphics::hist(x, breaks = bx, right = right, include.lowest = TRUE, plot = FALSE)$counts } # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # Non-sorted and sorted positions # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - nx <- 1000L # Number of data points nb <- 200L # Number of bins # Uniformely distributed bins bx <- seq(from = 0, to = 1, length.out = nb + 1L) bx <- c(-1, bx, 2) # Sample data points set.seed(0xBEEF) x <- runif(nx, min = 0, max = 1) for (kk in 1:2) { n0 <- binCounts_hist(x, bx = bx) n1 <- binCounts(x, bx = bx) # Sanity check stopifnot(identical(n1, n0)) # Check reversed n1r <- rev(binCounts(-x, bx = rev(-bx), right = TRUE)) stopifnot(identical(n1r, n1)) # Retry with a sorted vector x <- sort(x) } # for (kk in 1:2) # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # Missing values # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - x <- 1:40 x[20] <- NA_integer_ nx <- length(x) # Bins bx <- c(0.5, 50.5, 100.5, 150.5, 200.5) y_smooth0 <- binCounts_hist(x, bx = bx) y_smooth <- binCounts(x, bx = bx) # Sanity check stopifnot(all.equal(y_smooth, y_smooth0)) # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # Border cases # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - x <- 1:10 bx <- min(x) - c(10, 1) y_smooth <- binCounts(x, bx = bx) stopifnot(all.equal(y_smooth, 0L)) bx <- range(x) y_smooth <- binCounts(x, bx = bx) stopifnot(all.equal(y_smooth, length(x) - 1L)) bx <- max(x) + c(1, 10) y_smooth <- binCounts(x, bx = bx) stopifnot(all.equal(y_smooth, 0L)) # Every second empty x <- 1:10 bx <- rep(x, each = 2L) y_smooth <- binCounts(x, bx = bx) stopifnot(all.equal(y_smooth, rep(c(0L, 1L), length.out = length(bx) - 1L))) ## NOTE: binCounts_hist() does not give the same last bin count # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # Exception handling # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # Zero bin boundaries (invalid bin definition) bx <- double(0L) res <- try(y_smooth <- binCounts(1:10, bx = bx), silent = TRUE) stopifnot(inherits(res, "try-error")) # One bin boundary (invalid bin definition) bx <- double(1L) res <- try(y_smooth <- binCounts(1:10, bx = bx), silent = TRUE) stopifnot(inherits(res, "try-error"))