* installing *source* package 'matrixCorr' ... ** this is package 'matrixCorr' version '0.10.0' ** using staged installation ********************************************** WARNING: this package has a configure script It probably needs manual configuration ********************************************** ** libs specified C++17 using C++ compiler: 'g++.exe (GCC) 14.3.0' using C++17 g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c biweight_mid_corr.cpp -o biweight_mid_corr.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bland_altman.cpp -o bland_altman.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bland_altman_repeated.cpp -o bland_altman_repeated.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated.cpp -o ccc_repeated.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated_helper.cpp -o ccc_repeated_helper.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated_mixed_model.cpp -o ccc_repeated_mixed_model.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c concordance_corr.cpp -o concordance_corr.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c distance_correlation.cpp -o distance_correlation.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kendall_corr.cpp -o kendall_corr.o kendall_corr.cpp: In instantiation of 'double {anonymous}::bisect_root(Func&&, double, double, double, double, double, int) [with Func = const kendall_el_ratio_stat(const arma::vec&, double, double&)::&]': kendall_corr.cpp:472:25: required from here 472 | lambda = bisect_root(g, lo, hi, g_lo, g_hi); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ kendall_corr.cpp:110:10: warning: variable 'f_right' set but not used [-Wunused-but-set-variable] 110 | double f_right = f_hi; | ^~~~~~~ kendall_corr.cpp: In instantiation of 'double {anonymous}::bisect_root(Func&&, double, double, double, double, double, int) [with Func = const kendall_ifel_ci_core(const arma::vec&, const arma::vec&, double, double, double&, double&)::&]': kendall_corr.cpp:529:24: required from here 529 | lwr = bisect_root(f, left_start, tau_hat, f_left, f_tau); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kendall_corr.cpp:110:10: warning: variable 'f_right' set but not used [-Wunused-but-set-variable] 110 | double f_right = f_hi; | ^~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c partial_correlation.cpp -o partial_correlation.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pearson.cpp -o pearson.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rmcorr.cpp -o rmcorr.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c robust_correlations.cpp -o robust_correlations.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c schafer_strimmer_shrinkage_correlation.cpp -o schafer_strimmer_shrinkage_correlation.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c spearman.cpp -o spearman.o spearman.cpp: In instantiation of 'double {anonymous}::bisect_root(Func&&, double, double, double, double, double, int) [with Func = const spearman_jel_ci_core(const arma::vec&, const arma::vec&, double, double, double&, double&)::&]': spearman.cpp:139:24: required from here 139 | lwr = bisect_root(g, -1.0, u, g_lo, g_u); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ spearman.cpp:63:10: warning: variable 'f_right' set but not used [-Wunused-but-set-variable] 63 | double f_right = f_hi; | ^~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c tetrachoric.cpp -o tetrachoric.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c validate_corr_input.cpp -o validate_corr_input.o g++ -shared -s -static-libgcc -o matrixCorr.dll tmp.def RcppExports.o biweight_mid_corr.o bland_altman.o bland_altman_repeated.o ccc_repeated.o ccc_repeated_helper.o ccc_repeated_mixed_model.o concordance_corr.o distance_correlation.o kendall_corr.o partial_correlation.o pearson.o rmcorr.o robust_correlations.o schafer_strimmer_shrinkage_correlation.o spearman.o tetrachoric.o validate_corr_input.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -fopenmp -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-matrixCorr/00new/matrixCorr/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (matrixCorr)