downloading reverse dependencies ... downloading ADMUR_1.0.3.tar.gz ... ok downloading aglm_0.4.0.tar.gz ... ok downloading ammistability_0.1.4.tar.gz ... ok downloading augmentedRCBD_0.1.7.tar.gz ... ok downloading BasketballAnalyzeR_0.8.0.tar.gz ... ok downloading bayesassurance_0.1.0.tar.gz ... ok downloading BayesDLMfMRI_0.0.3.tar.gz ... ok downloading BEKKs_1.4.5.tar.gz ... ok downloading bioregion_1.2.0.tar.gz ... ok downloading BoundEdgeworth_0.1.2.1.tar.gz ... ok downloading BrailleR_1.0.2.tar.gz ... ok downloading circhelp_1.1.tar.gz ... ok downloading clifford_1.0-8.tar.gz ... ok downloading clugenr_1.0.3.tar.gz ... ok downloading complexlm_1.1.2.tar.gz ... ok downloading covatest_1.2.3.tar.gz ... ok downloading cpop_1.0.7.tar.gz ... ok downloading eatATA_1.1.2.tar.gz ... ok downloading einsum_0.1.2.tar.gz ... ok downloading EmiR_1.0.4.tar.gz ... ok downloading esci_1.0.7.tar.gz ... ok downloading espadon_1.11.0.tar.gz ... ok downloading factReg_1.0.0.tar.gz ... ok downloading FKF.SP_0.3.4.tar.gz ... ok downloading germinationmetrics_0.1.8.tar.gz ... ok downloading GGMncv_2.1.1.tar.gz ... ok downloading GOCompare_1.0.2.1.tar.gz ... ok downloading heterometa_0.3.tar.gz ... ok downloading JointAI_1.0.6.tar.gz ... ok downloading jointCalib_0.1.0.tar.gz ... ok downloading maczic_1.0.0.tar.gz ... ok downloading MarZIC_1.0.0.tar.gz ... ok downloading metabodecon_1.2.6.tar.gz ... ok downloading metadat_1.4-0.tar.gz ... ok downloading metafor_4.8-0.tar.gz ... ok downloading metan_1.19.0.tar.gz ... ok downloading metap_1.12.tar.gz ... ok downloading mlmhelpr_0.1.1.tar.gz ... ok downloading mlrv_0.1.2.tar.gz ... ok downloading MM_1.6-8.tar.gz ... ok downloading multivator_1.1-11.tar.gz ... ok downloading NetInt_1.0.0.tar.gz ... ok downloading NFCP_1.2.1.tar.gz ... ok downloading OCA_0.5.tar.gz ... ok downloading onion_1.5-3.tar.gz ... ok downloading Path.Analysis_0.1.tar.gz ... ok downloading PLFD_0.2.0.tar.gz ... ok downloading poolr_1.1-1.tar.gz ... ok downloading prospectr_0.2.8.tar.gz ... ok downloading quadform_0.0-2.tar.gz ... ok downloading remiod_1.0.2.tar.gz ... ok downloading resemble_2.2.3.tar.gz ... ok downloading ReturnCurves_1.0.1.tar.gz ... ok downloading robust2sls_0.2.2.tar.gz ... ok downloading rYWAASB_0.2.tar.gz ... ok downloading SCEM_1.1.0.tar.gz ... ok downloading sdcLog_0.5.0.tar.gz ... ok downloading singleRcapture_0.2.3.tar.gz ... ok downloading sjSDM_1.0.6.tar.gz ... ok downloading sorcering_1.1.0.tar.gz ... ok downloading spfda_0.9.1.tar.gz ... ok downloading statpsych_1.7.0.tar.gz ... ok downloading TDLM_1.1.1.tar.gz ... ok downloading tdsa_1.1-0.tar.gz ... ok downloading tseriesTARMA_0.5-1.tar.gz ... ok downloading vcmeta_1.4.0.tar.gz ... ok downloading artma_0.2.1.tar.gz ... ok downloading mwcsr_0.1.9.tar.gz ... ok downloading pkgload_1.4.0.tar.gz ... ok installing dependencies ‘BAMBI’, ‘bayesmeta’, ‘BioNet’, ‘box.linters’, ‘calculus’, ‘cffr’, ‘corrr’, ‘crops’, ‘DLBCL’, ‘ebal’, ‘Ecume’, ‘estmeansd’, ‘exactci’, ‘fastkmedoids’, ‘FKF’, ‘FKF.SP’, ‘freealg’, ‘GAS’, ‘ggtern’, ‘glmulti’, ‘gslnls’, ‘installr’, ‘ivgets’, ‘JointAI’, ‘js’, ‘languageserver’, ‘legendry’, ‘lorentz’, ‘LSMRealOptions’, ‘mathjaxr’, ‘metaBLUE’, ‘metan’, ‘mnonr’, ‘mutoss’, ‘NetworkComparisonTest’, ‘NetworkToolbox’, ‘neurobase’, ‘NFCP’, ‘nlshrink’, ‘numform’, ‘Oarray’, ‘onion’, ‘operators’, ‘partitions’, ‘prospectr’, ‘quadform’, ‘readJDX’, ‘roloc’, ‘rolocISCCNBS’, ‘sadists’, ‘speaq’, ‘statpsych’, ‘TFisher’, ‘toscutil’, ‘wildmeta’ also installing the dependencies ‘eigenmodel’, ‘PDQutils’, ‘IsingFit’, ‘networktools’, ‘MassSpecWavelet’, ‘robumeta’, ‘gets’ begin installing package ‘eigenmodel’ begin installing package ‘PDQutils’ begin installing package ‘IsingFit’ begin installing package ‘MassSpecWavelet’ begin installing package ‘robumeta’ begin installing package ‘gets’ begin installing package ‘js’ begin installing package ‘numform’ begin installing package ‘operators’ begin installing package ‘neurobase’ begin installing package ‘GAS’ begin installing package ‘fastkmedoids’ begin installing package ‘roloc’ begin installing package ‘installr’ begin installing package ‘BAMBI’ begin installing package ‘crops’ begin installing package ‘legendry’ begin installing package ‘FKF’ begin installing package ‘gslnls’ begin installing package ‘nlshrink’ begin installing package ‘ebal’ begin installing package ‘readJDX’ begin installing package ‘toscutil’ begin installing package ‘mathjaxr’ begin installing package ‘metaBLUE’ begin installing package ‘glmulti’ begin installing package ‘calculus’ begin installing package ‘TFisher’ * installing *source* package ‘operators’ ... ** this is package ‘operators’ version ‘0.1-8’ ** package ‘operators’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (operators) begin installing package ‘mutoss’ * installing *source* package ‘mathjaxr’ ... ** this is package ‘mathjaxr’ version ‘1.8-0’ ** using staged installation ** libs make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxTqmdK/R.INSTALL2728f954bb00/mathjaxr/src' # install.libs.R will minify the Javascript if js is installed make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxTqmdK/R.INSTALL2728f954bb00/mathjaxr/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mathjaxr/00new/mathjaxr ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mathjaxr) begin installing package ‘Oarray’ * installing *source* package ‘ebal’ ... ** this is package ‘ebal’ version ‘0.1-8’ ** package ‘ebal’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ebal) begin installing package ‘LSMRealOptions’ * installing *source* package ‘eigenmodel’ ... ** this is package ‘eigenmodel’ version ‘1.11’ ** package ‘eigenmodel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (eigenmodel) begin installing package ‘corrr’ * installing *source* package ‘PDQutils’ ... ** this is package ‘PDQutils’ version ‘0.1.6’ ** package ‘PDQutils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PDQutils) begin installing package ‘exactci’ * installing *source* package ‘roloc’ ... ** this is package ‘roloc’ version ‘0.1-2’ ** package ‘roloc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (roloc) begin installing package ‘cffr’ * installing *source* package ‘js’ ... ** this is package ‘js’ version ‘1.2.1’ ** package ‘js’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (js) begin installing package ‘ggtern’ * installing *source* package ‘FKF’ ... ** this is package ‘FKF’ version ‘0.2.6’ ** package ‘FKF’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWgiegf/R.INSTALL2728f43bf4deef/FKF/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fkflib.c -o fkflib.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o FKF.so fkflib.o init.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWgiegf/R.INSTALL2728f43bf4deef/FKF/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-FKF/00new/FKF/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (FKF) begin installing package ‘mnonr’ * installing *source* package ‘robumeta’ ... ** this is package ‘robumeta’ version ‘2.1’ ** package ‘robumeta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (robumeta) begin installing package ‘Ecume’ * installing *source* package ‘toscutil’ ... ** this is package ‘toscutil’ version ‘2.8.0’ ** package ‘toscutil’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (toscutil) begin installing package ‘box.linters’ * installing *source* package ‘nlshrink’ ... ** this is package ‘nlshrink’ version ‘1.0.1’ ** package ‘nlshrink’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlshrink) begin installing package ‘languageserver’ * installing *source* package ‘Oarray’ ... ** this is package ‘Oarray’ version ‘1.4-9’ ** package ‘Oarray’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading Creating a generic function for ‘slice.index’ from package ‘base’ in package ‘Oarray’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Oarray) begin installing package ‘BioNet’ * installing *source* package ‘MassSpecWavelet’ ... ** this is package ‘MassSpecWavelet’ version ‘1.74.0’ ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplcJCSm/R.INSTALL2728aa7639c6b1/MassSpecWavelet/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c find_local_maximum.c -o find_local_maximum.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o MassSpecWavelet.so find_local_maximum.o init.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplcJCSm/R.INSTALL2728aa7639c6b1/MassSpecWavelet/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-MassSpecWavelet/00new/MassSpecWavelet/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MassSpecWavelet) begin installing package ‘DLBCL’ * installing *source* package ‘numform’ ... ** this is package ‘numform’ version ‘0.7.0’ ** package ‘numform’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (numform) begin installing package ‘partitions’ * installing *source* package ‘readJDX’ ... ** this is package ‘readJDX’ version ‘0.6.4’ ** package ‘readJDX’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (readJDX) begin installing package ‘networktools’ * installing *source* package ‘LSMRealOptions’ ... ** this is package ‘LSMRealOptions’ version ‘0.2.1’ ** package ‘LSMRealOptions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (LSMRealOptions) begin installing package ‘rolocISCCNBS’ * installing *source* package ‘installr’ ... ** this is package ‘installr’ version ‘0.23.4’ ** package ‘installr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (installr) begin installing package ‘sadists’ * installing *source* package ‘mnonr’ ... ** this is package ‘mnonr’ version ‘1.0.0’ ** package ‘mnonr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mnonr) begin installing package ‘speaq’ * installing *source* package ‘exactci’ ... ** this is package ‘exactci’ version ‘1.4-4’ ** package ‘exactci’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (exactci) begin installing package ‘wildmeta’ * installing *source* package ‘metaBLUE’ ... ** this is package ‘metaBLUE’ version ‘1.0.0’ ** package ‘metaBLUE’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metaBLUE) begin installing package ‘quadform’ * installing *source* package ‘crops’ ... ** this is package ‘crops’ version ‘1.0.3’ ** package ‘crops’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crops) begin installing package ‘FKF.SP’ * installing *source* package ‘glmulti’ ... ** this is package ‘glmulti’ version ‘1.0.8’ ** package ‘glmulti’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘getfit’ with signature ‘object="coxph"’: no definition for class “coxph” in method for ‘getfit’ with signature ‘object="coxph.null"’: no definition for class “coxph.null” ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmulti) begin installing package ‘metan’ * installing *source* package ‘DLBCL’ ... ** this is package ‘DLBCL’ version ‘1.48.0’ ** using staged installation ** data ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DLBCL) begin installing package ‘JointAI’ * installing *source* package ‘corrr’ ... ** this is package ‘corrr’ version ‘0.4.4’ ** package ‘corrr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (corrr) begin installing package ‘prospectr’ * installing *source* package ‘TFisher’ ... ** this is package ‘TFisher’ version ‘0.2.0’ ** package ‘TFisher’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TFisher) begin installing package ‘bayesmeta’ * installing *source* package ‘box.linters’ ... ** this is package ‘box.linters’ version ‘0.10.5’ ** package ‘box.linters’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ! The packages {treesitter} and {treesitter.r} are required by namespaced_function_calls(). Please install these packages if you want to use namespaced_function_calls(). They require R version >= 4.3.0. ! The packages {treesitter} and {treesitter.r} are required by namespaced_function_calls(). Please install these packages if you want to use namespaced_function_calls(). They require R version >= 4.3.0. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (box.linters) begin installing package ‘statpsych’ * installing *source* package ‘sadists’ ... ** this is package ‘sadists’ version ‘0.2.5’ ** package ‘sadists’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sadists) begin installing package ‘estmeansd’ * installing *source* package ‘partitions’ ... ** this is package ‘partitions’ version ‘1.10-9’ ** package ‘partitions’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEjLcnv/R.INSTALL27305e9afecb1/partitions/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c app.cpp -o app.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c partitions.c -o partitions.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c partitions_init.c -o partitions_init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c permutations.c -o permutations.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o partitions.so app.o partitions.o partitions_init.o permutations.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEjLcnv/R.INSTALL27305e9afecb1/partitions/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-partitions/00new/partitions/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (partitions) begin installing package ‘freealg’ * installing *source* package ‘quadform’ ... ** this is package ‘quadform’ version ‘0.0-2’ ** package ‘quadform’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (quadform) begin installing package ‘lorentz’ * installing *source* package ‘neurobase’ ... ** this is package ‘neurobase’ version ‘1.32.4’ ** package ‘neurobase’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (neurobase) * installing *source* package ‘cffr’ ... ** this is package ‘cffr’ version ‘1.2.0’ ** package ‘cffr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cffr) * installing *source* package ‘FKF.SP’ ... ** this is package ‘FKF.SP’ version ‘0.3.4’ ** package ‘FKF.SP’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4WsxXe/R.INSTALL2732313c876931/FKF.SP/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fkf_SP.c -o fkf_SP.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fkf_SP_verbose.c -o fkf_SP_verbose.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fkfs_SP.c -o fkfs_SP.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fks_SP.c -o fks_SP.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o FKF.SP.so fkf_SP.o fkf_SP_verbose.o fkfs_SP.o fks_SP.o init.o utils.o -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4WsxXe/R.INSTALL2732313c876931/FKF.SP/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-FKF.SP/00new/FKF.SP/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (FKF.SP) begin installing package ‘NFCP’ * installing *source* package ‘estmeansd’ ... ** this is package ‘estmeansd’ version ‘1.0.1’ ** package ‘estmeansd’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (estmeansd) * installing *source* package ‘lorentz’ ... ** this is package ‘lorentz’ version ‘1.1-2’ ** package ‘lorentz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lorentz) * installing *source* package ‘IsingFit’ ... ** this is package ‘IsingFit’ version ‘0.4’ ** package ‘IsingFit’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IsingFit) begin installing package ‘NetworkToolbox’ * installing *source* package ‘gets’ ... ** this is package ‘gets’ version ‘0.38’ ** package ‘gets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gets) begin installing package ‘ivgets’ * installing *source* package ‘wildmeta’ ... ** this is package ‘wildmeta’ version ‘0.3.2’ ** package ‘wildmeta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wildmeta) * installing *source* package ‘speaq’ ... ** this is package ‘speaq’ version ‘2.7.0’ ** package ‘speaq’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (speaq) * installing *source* package ‘fastkmedoids’ ... ** this is package ‘fastkmedoids’ version ‘1.2’ ** package ‘fastkmedoids’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpkx1d5S/R.INSTALL2728bf1df169ca/fastkmedoids/src' g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pam.cpp -o pam.o In file included from pam.cpp:21: pam.h: In member function ‘int Xoroshiro128Random::nextInt(int)’: pam.h:57:55: warning: suggest parentheses around ‘-’ in operand of ‘&’ [-Wparentheses] 57 | int r = (int)((n & -n) == n ? nextLong() & n - 1 // power of two | ~~^~~ pam.h: In member function ‘std::vector Xoroshiro128Random::randomSample(int, int)’: pam.h:82:35: warning: comparison of integer expressions of different signedness: ‘std::unordered_map::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 82 | while (sample_dict.size() < samplesize) { | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ pam.h: At global scope: pam.h:465:25: warning: ‘virtual Assignment& Assignment::operator=(const Assignment&)’ was hidden [-Woverloaded-virtual=] 465 | virtual Assignment& operator=(const Assignment& other); | ^~~~~~~~ pam.h:533:7: note: by ‘FastAssignment& FastAssignment::operator=(const FastAssignment&)’ 533 | class FastAssignment : public Assignment | ^~~~~~~~~~~~~~ pam.cpp: In member function ‘double LAB::getMinDist(int, std::vector&, std::vector&)’: pam.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | for (int i=0; i LAB::run(const std::vector&, int)’: pam.cpp:166:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 166 | for (int j=0; j::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 191 | while(medids.size() < k) { | ~~~~~~~~~~~~~~^~~ pam.cpp:203:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 203 | for (int j=0; j&)’: pam.cpp:374:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 374 | for (int j=0; j&, std::vector&, std::vector&, std::vector&)’: pam.cpp:522:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 522 | for (int j=0; j::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 527 | for(int i = 0; i < cost.size(); i++) { | ~~^~~~~~~~~~~~~ pam.cpp: In member function ‘virtual void FastPAM::computeReassignmentCost(int, std::vector&)’: pam.cpp:566:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 566 | for(int pi = pj + 1; pi < cost.size(); pi++) { | ~~~^~~~~~~~~~~~~ pam.cpp: In member function ‘virtual double FastPAM::assignToNearestCluster(std::vector&)’: pam.cpp:608:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 608 | for (int h=0; h< means.size(); ++h) { | ~^~~~~~~~~~~~~~ pam.cpp: In member function ‘int FastPAM::argmin(const std::vector&)’: pam.cpp:639:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 639 | for(int i = 0; i < best.size(); i++) { | ~~^~~~~~~~~~~~~ pam.cpp: In member function ‘int FastPAM::updateSecondNearest(int, std::vector&, int, double, int)’: pam.cpp:716:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 716 | for (int i=0; i PAMUtils::randomSample(Xoroshiro128Random&, int, int, const std::vector&)’: pam.cpp:740:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 740 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 748 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 756 | if (sample_dict.size() < samplesize) { | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ pam.cpp:761:58: warning: comparison of integer expressions of different signedness: ‘std::unordered_map::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 761 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 822 | for (int k=0; k&, std::vector&, std::vector&, std::vector&)’: pam.cpp:844:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 844 | for (int j=0; j::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 856 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 916 | for (int k=0; k::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1119 | for(int i = 0; i < medoids.size(); i++) { | ~~^~~~~~~~~~~~~~~~ pam.cpp: In member function ‘virtual bool Assignment::hasMedoid(int)’: pam.cpp:1157:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1157 | for (int i=0; i&, int)’: pam.cpp:344:30: warning: ‘bestid’ may be used uninitialized [-Wmaybe-uninitialized] 344 | medoids[bestcluster] = bestid; pam.cpp:313:9: note: ‘bestid’ was declared here 313 | int bestid; | ^~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_fastkmedoids.cpp -o rcpp_fastkmedoids.o In file included from rcpp_fastkmedoids.cpp:19: pam.h: In member function ‘int Xoroshiro128Random::nextInt(int)’: pam.h:57:55: warning: suggest parentheses around ‘-’ in operand of ‘&’ [-Wparentheses] 57 | int r = (int)((n & -n) == n ? nextLong() & n - 1 // power of two | ~~^~~ pam.h: In member function ‘std::vector Xoroshiro128Random::randomSample(int, int)’: pam.h:82:35: warning: comparison of integer expressions of different signedness: ‘std::unordered_map::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 82 | while (sample_dict.size() < samplesize) { | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ pam.h: At global scope: pam.h:465:25: warning: ‘virtual Assignment& Assignment::operator=(const Assignment&)’ was hidden [-Woverloaded-virtual=] 465 | virtual Assignment& operator=(const Assignment& other); | ^~~~~~~~ pam.h:533:7: note: by ‘FastAssignment& FastAssignment::operator=(const FastAssignment&)’ 533 | class FastAssignment : public Assignment | ^~~~~~~~~~~~~~ g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fastkmedoids.so RcppExports.o pam.o rcpp_fastkmedoids.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpkx1d5S/R.INSTALL2728bf1df169ca/fastkmedoids/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fastkmedoids/00new/fastkmedoids/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastkmedoids) * installing *source* package ‘NFCP’ ... ** this is package ‘NFCP’ version ‘1.2.1’ ** package ‘NFCP’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NFCP) * installing *source* package ‘mutoss’ ... ** this is package ‘mutoss’ version ‘0.1-13’ ** package ‘mutoss’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mutoss) * installing *source* package ‘ivgets’ ... ** this is package ‘ivgets’ version ‘0.1.2’ ** package ‘ivgets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ivgets) * installing *source* package ‘legendry’ ... ** this is package ‘legendry’ version ‘0.2.1’ ** package ‘legendry’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (legendry) * installing *source* package ‘gslnls’ ... ** this is package ‘gslnls’ version ‘1.4.1’ ** package ‘gslnls’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-14 -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-14 -std=gnu23 accepts -g... yes checking for gcc-14 -std=gnu23 option to enable C11 features... none needed checking whether the compiler supports GNU Fortran... yes checking whether gfortran-14 accepts -g... yes checking for gsl-config... /usr/bin/gsl-config checking if GSL version >= 2.3... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp0ooUMS/R.INSTALL2728eb281efa0a/gslnls/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fdf.c -o fdf.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fdfvv.c -o fdfvv.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fdjac.c -o fdjac.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nls.c -o nls.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nls_fit.c -o nls_fit.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nls_irls.c -o nls_irls.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nls_large.c -o nls_large.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nls_mstart.c -o nls_mstart.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nls_test.c -o nls_test.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nls_utils.c -o nls_utils.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c test_nls.f90 -o test_nls.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c trust.c -o trust.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o gslnls.so fdf.o fdfvv.o fdjac.o init.o nls.o nls_fit.o nls_irls.o nls_large.o nls_mstart.o nls_test.o nls_utils.o test_nls.o trust.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp0ooUMS/R.INSTALL2728eb281efa0a/gslnls/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-gslnls/00new/gslnls/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gslnls) * installing *source* package ‘ggtern’ ... ** this is package ‘ggtern’ version ‘3.5.0’ ** package ‘ggtern’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggtern) * installing *source* package ‘calculus’ ... ** this is package ‘calculus’ version ‘1.0.1’ ** package ‘calculus’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp52REr8/R.INSTALL27290075818f84/calculus/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c calculus.cpp -o calculus.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o calculus.so RcppExports.o calculus.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp52REr8/R.INSTALL27290075818f84/calculus/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-calculus/00new/calculus/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (calculus) * installing *source* package ‘networktools’ ... ** this is package ‘networktools’ version ‘1.6.0’ ** package ‘networktools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (networktools) begin installing package ‘NetworkComparisonTest’ * installing *source* package ‘Ecume’ ... ** this is package ‘Ecume’ version ‘0.9.2’ ** package ‘Ecume’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Ecume) * installing *source* package ‘NetworkToolbox’ ... ** this is package ‘NetworkToolbox’ version ‘1.4.2’ ** package ‘NetworkToolbox’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NetworkToolbox) * installing *source* package ‘languageserver’ ... ** this is package ‘languageserver’ version ‘0.3.16’ ** package ‘languageserver’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcX4iad/R.INSTALL272f713f9f2511/languageserver/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fsm.c -o fsm.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c languageserver.c -o languageserver.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c reader.c -o reader.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c search.c -o search.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c stack.c -o stack.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o languageserver.so fsm.o languageserver.o reader.o search.o stack.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcX4iad/R.INSTALL272f713f9f2511/languageserver/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-languageserver/00new/languageserver/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (languageserver) * installing *source* package ‘statpsych’ ... ** this is package ‘statpsych’ version ‘1.7.0’ ** package ‘statpsych’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (statpsych) * installing *source* package ‘JointAI’ ... ** this is package ‘JointAI’ version ‘1.0.6’ ** package ‘JointAI’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (JointAI) * installing *source* package ‘bayesmeta’ ... ** this is package ‘bayesmeta’ version ‘3.4’ ** package ‘bayesmeta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bayesmeta) * installing *source* package ‘BioNet’ ... ** this is package ‘BioNet’ version ‘1.68.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BioNet) * installing *source* package ‘rolocISCCNBS’ ... ** this is package ‘rolocISCCNBS’ version ‘0.1’ ** package ‘rolocISCCNBS’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rolocISCCNBS) * installing *source* package ‘freealg’ ... ** this is package ‘freealg’ version ‘1.1-8’ ** package ‘freealg’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPFKHYf/R.INSTALL2733776b1aee9f/freealg/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c free.cpp -o free.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o freealg.so RcppExports.o free.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPFKHYf/R.INSTALL2733776b1aee9f/freealg/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-freealg/00new/freealg/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (freealg) begin installing package ‘onion’ * installing *source* package ‘NetworkComparisonTest’ ... ** this is package ‘NetworkComparisonTest’ version ‘2.2.2’ ** package ‘NetworkComparisonTest’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NetworkComparisonTest) * installing *source* package ‘prospectr’ ... ** this is package ‘prospectr’ version ‘0.2.8’ ** package ‘prospectr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHYhCA9/R.INSTALL2732bd62ac7d86/prospectr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c processing_helpers.cpp -o processing_helpers.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o prospectr.so RcppExports.o processing_helpers.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHYhCA9/R.INSTALL2732bd62ac7d86/prospectr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-prospectr/00new/prospectr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prospectr) * installing *source* package ‘onion’ ... ** this is package ‘onion’ version ‘1.5-3’ ** package ‘onion’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjJxBcs/R.INSTALL2737e5519c0fe9/onion/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c onion.c -o onion.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c onion_init.c -o onion_init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o onion.so onion.o onion_init.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjJxBcs/R.INSTALL2737e5519c0fe9/onion/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-onion/00new/onion/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘cprod’ in package ‘onion’ Creating a new generic function for ‘tcprod’ in package ‘onion’ Creating a new generic function for ‘ht’ in package ‘onion’ Creating a generic function for ‘zapsmall’ from package ‘base’ in package ‘onion’ Creating a generic function for ‘rownames’ from package ‘base’ in package ‘onion’ Creating a generic function for ‘colnames’ from package ‘base’ in package ‘onion’ Creating a generic function for ‘rownames<-’ from package ‘base’ in package ‘onion’ Creating a generic function for ‘colnames<-’ from package ‘base’ in package ‘onion’ ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (onion) * installing *source* package ‘metan’ ... ** this is package ‘metan’ version ‘1.19.0’ ** package ‘metan’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metan) * installing *source* package ‘BAMBI’ ... ** this is package ‘BAMBI’ version ‘2.3.6’ ** package ‘BAMBI’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprguolQ/R.INSTALL2728de27ddd03c/BAMBI/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c basic_c_fns.cpp -o basic_c_fns.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c univm_llik_grad.cpp -o univm_llik_grad.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c uniwnorm_llik_grad.cpp -o uniwnorm_llik_grad.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vmcos_llik_grad.cpp -o vmcos_llik_grad.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vmsin_llik_grad.cpp -o vmsin_llik_grad.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wnorm2_llik_grad.cpp -o wnorm2_llik_grad.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o BAMBI.so RcppExports.o basic_c_fns.o univm_llik_grad.o uniwnorm_llik_grad.o vmcos_llik_grad.o vmsin_llik_grad.o wnorm2_llik_grad.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprguolQ/R.INSTALL2728de27ddd03c/BAMBI/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-BAMBI/00new/BAMBI/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BAMBI) * installing *source* package ‘GAS’ ... ** this is package ‘GAS’ version ‘0.3.4.1’ ** package ‘GAS’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjBR0hS/R.INSTALL2728c727cff123/GAS/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Density.cpp -o Density.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DistWrap.cpp -o DistWrap.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Filters.cpp -o Filters.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Forecast.cpp -o Forecast.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c GASInnovation.cpp -o GASInnovation.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c IMWrap.cpp -o IMWrap.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Mapping.cpp -o Mapping.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Moments.cpp -o Moments.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Optimiser.cpp -o Optimiser.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PIT.cpp -o PIT.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Quantiles.cpp -o Quantiles.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SafeFun.cpp -o SafeFun.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ScoreWrap.cpp -o ScoreWrap.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Simulate.cpp -o Simulate.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Utils.cpp -o Utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ald.cpp -o ald.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ast.cpp -o ast.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ber.cpp -o ber.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c beta.cpp -o beta.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c crps.cpp -o crps.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c exp.cpp -o exp.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gamma.cpp -o gamma.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ghskt.cpp -o ghskt.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mvnorm.cpp -o mvnorm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mvt.cpp -o mvt.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c negbin.cpp -o negbin.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c norm.cpp -o norm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c poi.cpp -o poi.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c skellam.cpp -o skellam.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c snorm.cpp -o snorm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c snorm2.cpp -o snorm2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sstd.cpp -o sstd.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c std.cpp -o std.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o GAS.so Density.o DistWrap.o Filters.o Forecast.o GASInnovation.o IMWrap.o Mapping.o Moments.o Optimiser.o PIT.o Quantiles.o RcppExports.o SafeFun.o ScoreWrap.o Simulate.o Utils.o ald.o ast.o ber.o beta.o crps.o exp.o gamma.o ghskt.o mvnorm.o mvt.o negbin.o norm.o poi.o skellam.o snorm.o snorm2.o sstd.o std.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjBR0hS/R.INSTALL2728c727cff123/GAS/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-GAS/00new/GAS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GAS) checking mathjaxr_1.8-0.tar.gz ... checking ADMUR_1.0.3.tar.gz ... checking ammistability_0.1.4.tar.gz ... checking aglm_0.4.0.tar.gz ... checking augmentedRCBD_0.1.7.tar.gz ... checking BasketballAnalyzeR_0.8.0.tar.gz ... checking bayesassurance_0.1.0.tar.gz ... checking BayesDLMfMRI_0.0.3.tar.gz ... checking BEKKs_1.4.5.tar.gz ... checking bioregion_1.2.0.tar.gz ... checking BoundEdgeworth_0.1.2.1.tar.gz ... checking BrailleR_1.0.2.tar.gz ... checking circhelp_1.1.tar.gz ... checking clugenr_1.0.3.tar.gz ... checking clifford_1.0-8.tar.gz ... checking complexlm_1.1.2.tar.gz ... checking covatest_1.2.3.tar.gz ... checking cpop_1.0.7.tar.gz ... checking eatATA_1.1.2.tar.gz ... checking einsum_0.1.2.tar.gz ... checking EmiR_1.0.4.tar.gz ... checking esci_1.0.7.tar.gz ... checking espadon_1.11.0.tar.gz ... checking factReg_1.0.0.tar.gz ... checking FKF.SP_0.3.4.tar.gz ... checking germinationmetrics_0.1.8.tar.gz ... checking GGMncv_2.1.1.tar.gz ... checking GOCompare_1.0.2.1.tar.gz ... checking mlmhelpr_0.1.1.tar.gz ... checking heterometa_0.3.tar.gz ... checking NFCP_1.2.1.tar.gz ... checking remiod_1.0.2.tar.gz ... checking Path.Analysis_0.1.tar.gz ... checking resemble_2.2.3.tar.gz ... checking SCEM_1.1.0.tar.gz ... checking JointAI_1.0.6.tar.gz ... checking maczic_1.0.0.tar.gz ... checking onion_1.5-3.tar.gz ... checking OCA_0.5.tar.gz ... checking PLFD_0.2.0.tar.gz ... checking vcmeta_1.4.0.tar.gz ... checking jointCalib_0.1.0.tar.gz ... checking rYWAASB_0.2.tar.gz ... checking robust2sls_0.2.2.tar.gz ... checking singleRcapture_0.2.3.tar.gz ... checking NetInt_1.0.0.tar.gz ... checking metabodecon_1.2.6.tar.gz ... checking ReturnCurves_1.0.1.tar.gz ... checking metafor_4.8-0.tar.gz ... checking MarZIC_1.0.0.tar.gz ... checking MM_1.6-8.tar.gz ... checking multivator_1.1-11.tar.gz ... checking metap_1.12.tar.gz ... checking metadat_1.4-0.tar.gz ... checking poolr_1.1-1.tar.gz ... checking mwcsr_0.1.9.tar.gz ... checking sjSDM_1.0.6.tar.gz ... checking spfda_0.9.1.tar.gz ... checking sdcLog_0.5.0.tar.gz ... checking mlrv_0.1.2.tar.gz ... checking pkgload_1.4.0.tar.gz ... checking statpsych_1.7.0.tar.gz ... checking prospectr_0.2.8.tar.gz ... checking tseriesTARMA_0.5-1.tar.gz ... checking sorcering_1.1.0.tar.gz ... checking metan_1.19.0.tar.gz ... checking quadform_0.0-2.tar.gz ... checking artma_0.2.1.tar.gz ... checking TDLM_1.1.1.tar.gz ... checking tdsa_1.1-0.tar.gz ... Depends: Timings: user system elapsed mathjaxr 37.442 3.86 38.335 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 14 55 Check results summary: mathjaxr ... OK rdepends_ADMUR ... OK rdepends_aglm ... NOTE * checking Rd cross-references ... NOTE rdepends_ammistability ... OK rdepends_artma ... OK rdepends_augmentedRCBD ... OK rdepends_BasketballAnalyzeR ... OK rdepends_bayesassurance ... NOTE * checking Rd cross-references ... NOTE rdepends_BayesDLMfMRI ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_BEKKs ... OK rdepends_bioregion ... OK rdepends_BoundEdgeworth ... OK rdepends_BrailleR ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_circhelp ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_clifford ... NOTE * checking C++ specification ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_clugenr ... OK rdepends_complexlm ... NOTE * checking Rd cross-references ... NOTE rdepends_covatest ... OK rdepends_cpop ... OK rdepends_eatATA ... OK rdepends_einsum ... OK rdepends_EmiR ... NOTE * checking C++ specification ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_esci ... OK rdepends_espadon ... OK rdepends_factReg ... OK rdepends_FKF.SP ... OK rdepends_germinationmetrics ... OK rdepends_GGMncv ... NOTE * checking C++ specification ... NOTE * checking top-level files ... NOTE * checking Rd files ... [3s/3s] NOTE rdepends_GOCompare ... OK rdepends_heterometa ... OK rdepends_JointAI ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_jointCalib ... OK rdepends_maczic ... NOTE * checking Rd cross-references ... NOTE rdepends_MarZIC ... OK rdepends_metabodecon ... OK rdepends_metadat ... OK rdepends_metafor ... OK rdepends_metan ... OK rdepends_metap ... OK rdepends_mlmhelpr ... OK rdepends_mlrv ... OK rdepends_MM ... OK rdepends_multivator ... OK rdepends_mwcsr ... OK rdepends_NetInt ... OK rdepends_NFCP ... OK rdepends_OCA ... OK rdepends_onion ... OK rdepends_Path.Analysis ... OK rdepends_pkgload ... OK rdepends_PLFD ... NOTE * checking C++ specification ... NOTE rdepends_poolr ... OK rdepends_prospectr ... OK rdepends_quadform ... OK rdepends_remiod ... OK rdepends_resemble ... NOTE * checking Rd cross-references ... NOTE rdepends_ReturnCurves ... OK rdepends_robust2sls ... NOTE * checking Rd cross-references ... NOTE rdepends_rYWAASB ... OK rdepends_SCEM ... OK rdepends_sdcLog ... OK rdepends_singleRcapture ... OK rdepends_sjSDM ... OK rdepends_sorcering ... OK rdepends_spfda ... OK rdepends_statpsych ... OK rdepends_TDLM ... OK rdepends_tdsa ... OK rdepends_tseriesTARMA ... OK rdepends_vcmeta ... OK Check results changes: Package: ADMUR Check: CRAN incoming feasibility Old result: NOTE Package: aglm Check: CRAN incoming feasibility Old result: NOTE Package: ammistability Check: DESCRIPTION meta-information Old result: NOTE New result: OK Package: augmentedRCBD Check: DESCRIPTION meta-information Old result: NOTE New result: OK Package: BasketballAnalyzeR Check: examples Old result: NOTE New result: OK Package: bayesassurance Check: CRAN incoming feasibility Old result: NOTE Package: BayesDLMfMRI Check: CRAN incoming feasibility Old result: NOTE Package: BoundEdgeworth Check: CRAN incoming feasibility Old result: NOTE Package: BrailleR Check: examples Old result: NOTE New result: OK Package: circhelp Check: examples Old result: NOTE New result: OK Package: clifford Check: CRAN incoming feasibility Old result: NOTE Package: complexlm Check: CRAN incoming feasibility Old result: NOTE Package: covatest Check: CRAN incoming feasibility Old result: NOTE Package: EmiR Check: CRAN incoming feasibility Old result: NOTE Package: germinationmetrics Check: DESCRIPTION meta-information Old result: NOTE New result: OK Package: GGMncv Check: CRAN incoming feasibility Old result: NOTE Package: GOCompare Check: CRAN incoming feasibility Old result: NOTE Package: GOCompare Check: examples Old result: NOTE New result: OK Package: jointCalib Check: CRAN incoming feasibility Old result: NOTE Package: maczic Check: CRAN incoming feasibility Old result: NOTE Package: MarZIC Check: CRAN incoming feasibility Old result: NOTE Package: metafor Check: examples Old result: NOTE New result: OK Package: MM Check: CRAN incoming feasibility Old result: NOTE Package: multivator Check: CRAN incoming feasibility Old result: NOTE Package: NetInt Check: CRAN incoming feasibility Old result: NOTE Package: NFCP Check: CRAN incoming feasibility Old result: NOTE Package: OCA Check: CRAN incoming feasibility Old result: NOTE Package: PLFD Check: CRAN incoming feasibility Old result: NOTE Package: poolr Check: CRAN incoming feasibility Old result: NOTE Package: remiod Check: CRAN incoming feasibility Old result: NOTE Package: resemble Check: CRAN incoming feasibility Old result: NOTE Package: robust2sls Check: CRAN incoming feasibility Old result: NOTE Package: SCEM Check: CRAN incoming feasibility Old result: NOTE Package: sdcLog Check: CRAN incoming feasibility Old result: NOTE Package: spfda Check: CRAN incoming feasibility Old result: NOTE Package: statpsych Check: examples Old result: NOTE New result: OK Package: TDLM Check: examples Old result: NOTE New result: OK Package: tdsa Check: CRAN incoming feasibility Old result: NOTE